| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628264
Identifier: 169628264
GI number: 169628264
Start: 1186859
End: 1188028
Strand: Reverse
Name: 169628264
Synonym: MAB_1171c
Alternate gene names: NA
Gene position: 1188028-1186859 (Counterclockwise)
Preceding gene: 169628265
Following gene: 169628256
Centisome position: 23.45
GC content: 64.27
Gene sequence:
>1170_bases GTGACGTCAGTTTTCGAAGACTCCGCCTCGGCGTACTCGGTCGCGGCCGTCTTCAGCTTTGGCGCAGTGGTGGTGGTTGC CGCCGCCATGCTGCGCTCCCGGGTGCGCCCGCCGGCCGCCGTGGCACTGCTGTTGTCGTTCCTCTTCAAAGGGATCGCCG TCACCCTGGCCACCCCACCGCTGTACGAGAAATTCGACAACCTGGTCGGCGTGCACAACATGGGCCGGCTCGTCTTGAAC CTTTCCGGCGGCATGGCCTGGACCGCATGCGTCCTCACGGTCATCACCTTCTGGGGTGAATCCGGGCCCCGGGCGGTGCA GCGCGCACGGCTATGGGTCGGCATGGCGGTAGCCATCGGCGGCGCGCTCACGCTCTGCTGGTTTGTGGCCCCCACTTCCG AACTGCCACAAGACTTCTACGCTTCGCACGGCAACAAGCCCGCATGGGTCGCGTACATGCTGATCTATCTGATCACCTAC GGCTTGGGCGCACTGCTGATCATCATCAAATGCCTGCAGTACGCCCGTTTTCACGACGTCGCGTGGCTGCGGCGCAGCAT GCTCCTCACCGCGGCCGGTGCCACCATGTGCCTGGCGTTCTGCATCATGCGGGCACATTCGGCGATCTACGGCATGATCA CCAACGACAGCTACTCCTGGCAGCGTCTGGCCCCACTGGCCGCCACGATAGGGCAGATCCTGATCGTGATAGGGCTTGCG GGACCGTCGTTCTCGCAGTTGGTCTCCTCGGCACGCCAACGCATCCAAACCTACCGCTGGCACCGCCAGCTCGAACCGCT GTGGACCGCACTGTATGAAGGCAACACCCAGATCGCGCTGGCACCCCCCAGCGCCGCGATCGGTGATCACAACTATCGGC TCTACCGCAGAATCGTCGAGATTCGCGACGGTCTGAGCGCCATTCGCCCCTACGTGGCCGAGGACACCTCGTCGACCTCG GCGGCGGGACAGATCCATTCGGCCATCGAACAACAGCGCACGGCACCGCGGGCAGAGAAAAGCTCGGGCGCCAAGATCAT CGGCGAAGTTCCGGGCGCGAACCGCAAGCAAGAACTGCGCTGGCTGCTAGACGTCTCGCGCGAACTCCAGCAGATCAACC GCCGACGCACACCTGCGGCACCGGCGCCGGACCTGATTTCTTCGTCTTAG
Upstream 100 bases:
>100_bases AGCGGGTGAGTCCGGACAGCCACCGCCCCATCGCCGTCACGAACGCCAACCTGCGGCGCATCCTGGCATCGCTGACCTTG GAAGGCGTGCCGGCGGCGCC
Downstream 100 bases:
>100_bases CCGCCGCGGTCCGGATGGCCCGCACGATCTCACGGACCGCGATGAACACCAGATAAGAACCGAAGACCAGCGCCAACCAG CGCGCGTTGAGCGCCAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTSVFEDSASAYSVAAVFSFGAVVVVAAAMLRSRVRPPAAVALLLSFLFKGIAVTLATPPLYEKFDNLVGVHNMGRLVLN LSGGMAWTACVLTVITFWGESGPRAVQRARLWVGMAVAIGGALTLCWFVAPTSELPQDFYASHGNKPAWVAYMLIYLITY GLGALLIIIKCLQYARFHDVAWLRRSMLLTAAGATMCLAFCIMRAHSAIYGMITNDSYSWQRLAPLAATIGQILIVIGLA GPSFSQLVSSARQRIQTYRWHRQLEPLWTALYEGNTQIALAPPSAAIGDHNYRLYRRIVEIRDGLSAIRPYVAEDTSSTS AAGQIHSAIEQQRTAPRAEKSSGAKIIGEVPGANRKQELRWLLDVSRELQQINRRRTPAAPAPDLISSS
Sequences:
>Translated_389_residues MTSVFEDSASAYSVAAVFSFGAVVVVAAAMLRSRVRPPAAVALLLSFLFKGIAVTLATPPLYEKFDNLVGVHNMGRLVLN LSGGMAWTACVLTVITFWGESGPRAVQRARLWVGMAVAIGGALTLCWFVAPTSELPQDFYASHGNKPAWVAYMLIYLITY GLGALLIIIKCLQYARFHDVAWLRRSMLLTAAGATMCLAFCIMRAHSAIYGMITNDSYSWQRLAPLAATIGQILIVIGLA GPSFSQLVSSARQRIQTYRWHRQLEPLWTALYEGNTQIALAPPSAAIGDHNYRLYRRIVEIRDGLSAIRPYVAEDTSSTS AAGQIHSAIEQQRTAPRAEKSSGAKIIGEVPGANRKQELRWLLDVSRELQQINRRRTPAAPAPDLISSS >Mature_388_residues TSVFEDSASAYSVAAVFSFGAVVVVAAAMLRSRVRPPAAVALLLSFLFKGIAVTLATPPLYEKFDNLVGVHNMGRLVLNL SGGMAWTACVLTVITFWGESGPRAVQRARLWVGMAVAIGGALTLCWFVAPTSELPQDFYASHGNKPAWVAYMLIYLITYG LGALLIIIKCLQYARFHDVAWLRRSMLLTAAGATMCLAFCIMRAHSAIYGMITNDSYSWQRLAPLAATIGQILIVIGLAG PSFSQLVSSARQRIQTYRWHRQLEPLWTALYEGNTQIALAPPSAAIGDHNYRLYRRIVEIRDGLSAIRPYVAEDTSSTSA AGQIHSAIEQQRTAPRAEKSSGAKIIGEVPGANRKQELRWLLDVSRELQQINRRRTPAAPAPDLISSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42496; Mature: 42365
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVFEDSASAYSVAAVFSFGAVVVVAAAMLRSRVRPPAAVALLLSFLFKGIAVTLATPP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEHCCCCH LYEKFDNLVGVHNMGRLVLNLSGGMAWTACVLTVITFWGESGPRAVQRARLWVGMAVAIG HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GALTLCWFVAPTSELPQDFYASHGNKPAWVAYMLIYLITYGLGALLIIIKCLQYARFHDV HHHHHHHHHCCCHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWLRRSMLLTAAGATMCLAFCIMRAHSAIYGMITNDSYSWQRLAPLAATIGQILIVIGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC GPSFSQLVSSARQRIQTYRWHRQLEPLWTALYEGNTQIALAPPSAAIGDHNYRLYRRIVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHH IRDGLSAIRPYVAEDTSSTSAAGQIHSAIEQQRTAPRAEKSSGAKIIGEVPGANRKQELR HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHH WLLDVSRELQQINRRRTPAAPAPDLISSS HHHHHHHHHHHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure TSVFEDSASAYSVAAVFSFGAVVVVAAAMLRSRVRPPAAVALLLSFLFKGIAVTLATPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEHCCCCH LYEKFDNLVGVHNMGRLVLNLSGGMAWTACVLTVITFWGESGPRAVQRARLWVGMAVAIG HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GALTLCWFVAPTSELPQDFYASHGNKPAWVAYMLIYLITYGLGALLIIIKCLQYARFHDV HHHHHHHHHCCCHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWLRRSMLLTAAGATMCLAFCIMRAHSAIYGMITNDSYSWQRLAPLAATIGQILIVIGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC GPSFSQLVSSARQRIQTYRWHRQLEPLWTALYEGNTQIALAPPSAAIGDHNYRLYRRIVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHH IRDGLSAIRPYVAEDTSSTSAAGQIHSAIEQQRTAPRAEKSSGAKIIGEVPGANRKQELR HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHH WLLDVSRELQQINRRRTPAAPAPDLISSS HHHHHHHHHHHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA