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The map label for this gene is 169628257

Identifier: 169628257

GI number: 169628257

Start: 1180784

End: 1181551

Strand: Direct

Name: 169628257

Synonym: MAB_1164

Alternate gene names: NA

Gene position: 1180784-1181551 (Clockwise)

Preceding gene: 169628253

Following gene: 169628258

Centisome position: 23.3

GC content: 68.1

Gene sequence:

>768_bases
GTGTCGTCCGTCGCTGTGCGCTCCCTCCCGGCGCGCTTTGGACGAATCATGCTCGTCGTCTCCATCTCGGTGTTTCTGCT
GGCAGCAGGCTGTTCCTGGCAGTTGGGCGGCCGCAATCCGCTGCCGCAAGGCGTGCCGCCGCCCGCAGGTGATCCGGTGC
CCGACATCGCGACGCCGCCCGCACACATCCAGGGCCGCCCGGCCGATCAGCTCCGTGAGTGGTCGACACCACGCGCGGAG
AAGACGGGAATTCCCGTCATCGCGCTGGAGGCCTACGCCTACGCGGCCAAGGTTGCCGAGCGGGAGAACCCGCGCTGCAA
GATCGCGTGGACCACACTGGCCGGAATCGGCACCGTCGAGAGCCACAACGGCACGTATCACGGGGCCGAACTGCAACCCA
ACGGCGACGCACTGCCGCCGATTCGCGGCGTGCGGCTGGACGGGTCCAACGGAAACCTGCGGCTCCCGGACACCGACAAA
GGTGTGCTAGACGGCGACGCGAACCAGGACCGGGCGATGGGTCCCATGCAGTTCATTCCCGAAACCTGGCGTATCTACGG
CGTGCGCGCGGCCGGCGACGGCGAGCCCAGCCCCGACAACATCGATGACGCGGCGCTGTCGGCCGCTGGCTACCTGTGTT
CGCGCGGCGGTGACCTGAGCACCACCGACGGGTGGATCAAGGCGCTGTGGGCCTACAACATGTCGGACGTGTACGCCGAA
CAGGTACGGGACTGGGCAACGGCCTACGCCAAGGGTGCGACGCTGTAG

Upstream 100 bases:

>100_bases
CTTACCTGAAACAGGGGCGGGAGAGCAGCGGCTGCGCGGGCAAGTGGCCAGCTCATGCGACGATGGAGGGCAATCCATCG
CACCGTCTAGGAGTTCTGTC

Downstream 100 bases:

>100_bases
CACTAGTCTGTTACCCGACCACCGGAGCACCCCCCGAAGGAGAGACAGTGCCGATTCTTGAGCAGGTAGGCGCCCGCGAG
ATCCTCGACTCACGCGGCAA

Product: putative lipoprotein LpqU

Products: NA

Alternate protein names: Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Membrane-Bound Lytic Murein Transglycosylase B; Lipoprotein LpqU; Lytic Transglycosylase Catalytic; NLP/P60-Family Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B-Like; Transglycosylase; LpqU Protein; LOW QUALITY PROTEIN Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B Protein; Membrane-Bound Lytic Murein Transglycosylase; NLP/P60 Protein; Cell Wall-Associated Hydrolase Invasion-Associated Protein

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MSSVAVRSLPARFGRIMLVVSISVFLLAAGCSWQLGGRNPLPQGVPPPAGDPVPDIATPPAHIQGRPADQLREWSTPRAE
KTGIPVIALEAYAYAAKVAERENPRCKIAWTTLAGIGTVESHNGTYHGAELQPNGDALPPIRGVRLDGSNGNLRLPDTDK
GVLDGDANQDRAMGPMQFIPETWRIYGVRAAGDGEPSPDNIDDAALSAAGYLCSRGGDLSTTDGWIKALWAYNMSDVYAE
QVRDWATAYAKGATL

Sequences:

>Translated_255_residues
MSSVAVRSLPARFGRIMLVVSISVFLLAAGCSWQLGGRNPLPQGVPPPAGDPVPDIATPPAHIQGRPADQLREWSTPRAE
KTGIPVIALEAYAYAAKVAERENPRCKIAWTTLAGIGTVESHNGTYHGAELQPNGDALPPIRGVRLDGSNGNLRLPDTDK
GVLDGDANQDRAMGPMQFIPETWRIYGVRAAGDGEPSPDNIDDAALSAAGYLCSRGGDLSTTDGWIKALWAYNMSDVYAE
QVRDWATAYAKGATL
>Mature_254_residues
SSVAVRSLPARFGRIMLVVSISVFLLAAGCSWQLGGRNPLPQGVPPPAGDPVPDIATPPAHIQGRPADQLREWSTPRAEK
TGIPVIALEAYAYAAKVAERENPRCKIAWTTLAGIGTVESHNGTYHGAELQPNGDALPPIRGVRLDGSNGNLRLPDTDKG
VLDGDANQDRAMGPMQFIPETWRIYGVRAAGDGEPSPDNIDDAALSAAGYLCSRGGDLSTTDGWIKALWAYNMSDVYAEQ
VRDWATAYAKGATL

Specific function: Unknown

COG id: COG2951

COG function: function code M; Membrane-bound lytic murein transglycosylase B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27133; Mature: 27002

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVAVRSLPARFGRIMLVVSISVFLLAAGCSWQLGGRNPLPQGVPPPAGDPVPDIATPP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
AHIQGRPADQLREWSTPRAEKTGIPVIALEAYAYAAKVAERENPRCKIAWTTLAGIGTVE
CCCCCCCHHHHHHCCCCCCHHCCCCEEEEHHHHHHHHHHHCCCCEEEEEEEEECCCCEEE
SHNGTYHGAELQPNGDALPPIRGVRLDGSNGNLRLPDTDKGVLDGDANQDRAMGPMQFIP
CCCCEEECCEECCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCC
ETWRIYGVRAAGDGEPSPDNIDDAALSAAGYLCSRGGDLSTTDGWIKALWAYNMSDVYAE
CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHH
QVRDWATAYAKGATL
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSVAVRSLPARFGRIMLVVSISVFLLAAGCSWQLGGRNPLPQGVPPPAGDPVPDIATPP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
AHIQGRPADQLREWSTPRAEKTGIPVIALEAYAYAAKVAERENPRCKIAWTTLAGIGTVE
CCCCCCCHHHHHHCCCCCCHHCCCCEEEEHHHHHHHHHHHCCCCEEEEEEEEECCCCEEE
SHNGTYHGAELQPNGDALPPIRGVRLDGSNGNLRLPDTDKGVLDGDANQDRAMGPMQFIP
CCCCEEECCEECCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCC
ETWRIYGVRAAGDGEPSPDNIDDAALSAAGYLCSRGGDLSTTDGWIKALWAYNMSDVYAE
CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHH
QVRDWATAYAKGATL
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA