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The map label for this gene is mmpS4 [H]

Identifier: 169628228

GI number: 169628228

Start: 1148953

End: 1149354

Strand: Reverse

Name: mmpS4 [H]

Synonym: MAB_1135c

Alternate gene names: 169628228

Gene position: 1149354-1148953 (Counterclockwise)

Preceding gene: 169628230

Following gene: 169628227

Centisome position: 22.68

GC content: 59.7

Gene sequence:

>402_bases
GTGGTCATGGTCCTGGTCCTGGTCATCGCGGGCTTCGCGGTATGGCGGATTCGCGGCATCTTCGGTTCGCATCAGCTGCC
CACCTACGCCGGCAGCATGACCGACGACAAAAACAACTCCAAGCCCAAGCATGTCCTCTACGAGATCTTCGGCCCGCCCG
GCACCATTGCGGACATCAACTACATCGACAAGGAAGGGGAGCCCCACCAAATCAACGGGGCGACGCTACCGTGGTCGATC
GAGATCATCACCACCGCGCCGTCGATGACGGGCAACATCTTGGCCCAGACGCGCAATGCCGACGGGCTGGGTTGCCGCAT
CACGGCCAATGACGAGAAAAAAGACGAGAGGTATACCAACGAGGTGAGCGCCTACGTCTACTGCTTTGTGAAGTCCGCAT
GA

Upstream 100 bases:

>100_bases
AGCATTGCTGTTCAGCTAGTCCGCAGTAAGCGATCTGATCTACAGCAACGGGTGAAGGGGTCCTGCGATTTTTGGCGTTC
TGAAGCGGGCGTGGATCCCG

Downstream 100 bases:

>100_bases
GCGGGTCGCACGCAAACGGAGAGCCCACCTTCGTGGCCAAATGGATCCGCCGCCTGTCGGTCCCCATCGTCGTCGGCTGG
GTAGCACTCGTCGTCATCCT

Product: membrane protein MmpS

Products: NA

Alternate protein names: PGB14T-X [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADINYIDKEGEPHQINGATLPWSI
EIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTNEVSAYVYCFVKSA

Sequences:

>Translated_133_residues
MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADINYIDKEGEPHQINGATLPWSI
EIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTNEVSAYVYCFVKSA
>Mature_133_residues
MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADINYIDKEGEPHQINGATLPWSI
EIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTNEVSAYVYCFVKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 14651; Mature: 14651

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADIN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECE
YIDKEGEPHQINGATLPWSIEIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTN
EECCCCCCCEECCCCCCEEEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHH
EVSAYVYCFVKSA
CCEEEEEEEEECC
>Mature Secondary Structure
MVMVLVLVIAGFAVWRIRGIFGSHQLPTYAGSMTDDKNNSKPKHVLYEIFGPPGTIADIN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECE
YIDKEGEPHQINGATLPWSIEIITTAPSMTGNILAQTRNADGLGCRITANDEKKDERYTN
EECCCCCCCEECCCCCCEEEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHH
EVSAYVYCFVKSA
CCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]