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The map label for this gene is rsmI [H]

Identifier: 169628216

GI number: 169628216

Start: 1133944

End: 1134780

Strand: Direct

Name: rsmI [H]

Synonym: MAB_1123

Alternate gene names: 169628216

Gene position: 1133944-1134780 (Clockwise)

Preceding gene: 169628214

Following gene: 169628222

Centisome position: 22.38

GC content: 67.74

Gene sequence:

>837_bases
ATGGGGAACTTGCTGCTGGCGGCGACGCCGCTGGGTGAGCCGGCGGACGCCTCGCCCCGATTGCGTGAGGCGCTGGCCAA
GACATCGGTGGTGGCTGCCGAGGACACGCGTCGTGTGCGGGCCCTCGCGAAATCACTGGACGTGCAGATCAGCGGCCAGA
TCATCAGTTTCTACGATCAAAACGAGGCCAGCCGCATCGAGCCGCTGCTGGCGGATCTGGAGGCCGGATACGACGTGCTG
GTGGTGACCGATGCGGGTATGCCCTCGATCAGCGACCCGGGGTATCGCTTGGTCGCCGCATGTGTGAGACAGGGCATACC
GATCACGTGTCTGCCCGGACCGTCTGCGGTGACGACGGCGCTGGCGGTCTCGGGGCTACCGGTAGACCGCTTCTGTTTCG
AGGGCTTTGCGCCCCGTAAGCAAGGAGCGCGGAGCCGGTGGCTTTCCGAGTTGGTCGCCGAGCCGCGCACCTGTGTGTTC
TTCGAGTCGCCGCGGCGGCTTGCCGAGACACTGGCCGATGCGGTGCAGGTGCTGGGCCCGGAGCGCCGAGTGGCGGTGTG
CCGTGAGTTGACCAAGACGCATGAAGAGGTGCTGCGGGGAACGCTGCGCGAGTTGGCGGCGTGGGCCGAGGGCAACGAGG
TGCTCGGGGAGATCACGGTGGTGCTCGACGGCGGTCGTCCCGCGGTCCCCGAGATCGAGACCCTGGTGGCCAGGGTCGAG
GAATTGATGGACGACGGGATGGGGTTGCGTGAGGCCTGTGCGACGGCCATCGGGGAGTCCGGCGCCACGCTGTCGCGGCG
CGACCTCTACGACGCGGTGGTCAAAGCGCGGGATTGA

Upstream 100 bases:

>100_bases
GGAGATCCGACTCGGCTGCCGAGGTCGGCGGCAGGGTTGCGGGCGCGGTCACACGGTCGATCGTAGGGGAGGAGCCTGCT
CGGCCATCTAAGCTGCCCGG

Downstream 100 bases:

>100_bases
GTTCCGCGATCGCGGTGAGGCCGATGGTCGCGGCGGCCTTGTGCAGACATTCCTGCCATTCGGCGTCGGCGTCGGAGTCG
GCGGTGATGCCGCCGCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MGNLLLAATPLGEPADASPRLREALAKTSVVAAEDTRRVRALAKSLDVQISGQIISFYDQNEASRIEPLLADLEAGYDVL
VVTDAGMPSISDPGYRLVAACVRQGIPITCLPGPSAVTTALAVSGLPVDRFCFEGFAPRKQGARSRWLSELVAEPRTCVF
FESPRRLAETLADAVQVLGPERRVAVCRELTKTHEEVLRGTLRELAAWAEGNEVLGEITVVLDGGRPAVPEIETLVARVE
ELMDDGMGLREACATAIGESGATLSRRDLYDAVVKARD

Sequences:

>Translated_278_residues
MGNLLLAATPLGEPADASPRLREALAKTSVVAAEDTRRVRALAKSLDVQISGQIISFYDQNEASRIEPLLADLEAGYDVL
VVTDAGMPSISDPGYRLVAACVRQGIPITCLPGPSAVTTALAVSGLPVDRFCFEGFAPRKQGARSRWLSELVAEPRTCVF
FESPRRLAETLADAVQVLGPERRVAVCRELTKTHEEVLRGTLRELAAWAEGNEVLGEITVVLDGGRPAVPEIETLVARVE
ELMDDGMGLREACATAIGESGATLSRRDLYDAVVKARD
>Mature_277_residues
GNLLLAATPLGEPADASPRLREALAKTSVVAAEDTRRVRALAKSLDVQISGQIISFYDQNEASRIEPLLADLEAGYDVLV
VTDAGMPSISDPGYRLVAACVRQGIPITCLPGPSAVTTALAVSGLPVDRFCFEGFAPRKQGARSRWLSELVAEPRTCVFF
ESPRRLAETLADAVQVLGPERRVAVCRELTKTHEEVLRGTLRELAAWAEGNEVLGEITVVLDGGRPAVPEIETLVARVEE
LMDDGMGLREACATAIGESGATLSRRDLYDAVVKARD

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=227, Percent_Identity=42.7312775330396, Blast_Score=184, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29824; Mature: 29693

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNLLLAATPLGEPADASPRLREALAKTSVVAAEDTRRVRALAKSLDVQISGQIISFYDQ
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEEEECC
NEASRIEPLLADLEAGYDVLVVTDAGMPSISDPGYRLVAACVRQGIPITCLPGPSAVTTA
CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHH
LAVSGLPVDRFCFEGFAPRKQGARSRWLSELVAEPRTCVFFESPRRLAETLADAVQVLGP
HHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCC
ERRVAVCRELTKTHEEVLRGTLRELAAWAEGNEVLGEITVVLDGGRPAVPEIETLVARVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHH
ELMDDGMGLREACATAIGESGATLSRRDLYDAVVKARD
HHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNLLLAATPLGEPADASPRLREALAKTSVVAAEDTRRVRALAKSLDVQISGQIISFYDQ
CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEEEECC
NEASRIEPLLADLEAGYDVLVVTDAGMPSISDPGYRLVAACVRQGIPITCLPGPSAVTTA
CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHH
LAVSGLPVDRFCFEGFAPRKQGARSRWLSELVAEPRTCVFFESPRRLAETLADAVQVLGP
HHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCC
ERRVAVCRELTKTHEEVLRGTLRELAAWAEGNEVLGEITVVLDGGRPAVPEIETLVARVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHH
ELMDDGMGLREACATAIGESGATLSRRDLYDAVVKARD
HHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]