| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628199
Identifier: 169628199
GI number: 169628199
Start: 1120843
End: 1121562
Strand: Reverse
Name: 169628199
Synonym: MAB_1105c
Alternate gene names: NA
Gene position: 1121562-1120843 (Counterclockwise)
Preceding gene: 169628200
Following gene: 169628198
Centisome position: 22.13
GC content: 60.56
Gene sequence:
>720_bases GTGCAGGGCGAATACCTGAGCCAATACGCCGATTCGGACCCCTCATACCGGCAAGACCCCGCCATCAAGCCGTTCAAGAA CATCGGCGAAATGCGGGACATGGTGTCCACGTCCGACAAAGGCCACTACGCAGGCGAAATCATCAACGAACAAGCCCAGG AACAGCACCAGCAGCTCCTCAACGATGCTGCCCGTACCGGCAGCGACCACGACCTCAAAGCCGCTGGACGGCTCTCCCAA GGCATGCTCGACGGGGCGCTGGACTCTGTCGGCGAGAAACCCACGGACCAGAATGTCGAGGACCTCAAGAAACTGATCGG CAAGGTGCCCTTCGCTAGCGACGCTATGGACGTTCTCGACAGCGCACAAAAACAGATGGAAAACACCACGAAACTGCCCG AAGGATTCGCCCAAGACCTTGCCCAGTCCGGCAGTTTCGGCAACCCCTCCGCCTACCAAGCCAGCGTCCTAGACGCACTT GCACAGGCCCACCCCGGCATCGCCGATGACCCCATCGTCGGCAAATACATCAACGGCGGACACTTCGACCCCAGCACCAT CTCGGCGGAGCCACAGAGCGTGAAGGAAGCTCAAAGGGCCCTGGATGACTGGTTCAAGACCACGGCCCCACGCGACTACA ACGTCAACCTGGACCACTGGCAAGCCCAGGAACAGATGGGCGGGAAATACCCGAACTGGCAGTGGGACCCCCACCAGTGA
Upstream 100 bases:
>100_bases TCGGCCTTCGTCTCGGCGGTGTTCGACGCTCGCTGTCCGCCCTGCGCCCGGTTCTTCCAGACCCCGTCCTCGTGGTAGGT CTCAATGTCGCCTTTGGAAG
Downstream 100 bases:
>100_bases GCCCTCGGACCCTCACGCTGACCGCAGCTGCGATGTGTGCTCTGCTTGTCACCTCGTGCACGCACGAGAAACCCAAACAA CCAGCACTCACCTGGGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MQGEYLSQYADSDPSYRQDPAIKPFKNIGEMRDMVSTSDKGHYAGEIINEQAQEQHQQLLNDAARTGSDHDLKAAGRLSQ GMLDGALDSVGEKPTDQNVEDLKKLIGKVPFASDAMDVLDSAQKQMENTTKLPEGFAQDLAQSGSFGNPSAYQASVLDAL AQAHPGIADDPIVGKYINGGHFDPSTISAEPQSVKEAQRALDDWFKTTAPRDYNVNLDHWQAQEQMGGKYPNWQWDPHQ
Sequences:
>Translated_239_residues MQGEYLSQYADSDPSYRQDPAIKPFKNIGEMRDMVSTSDKGHYAGEIINEQAQEQHQQLLNDAARTGSDHDLKAAGRLSQ GMLDGALDSVGEKPTDQNVEDLKKLIGKVPFASDAMDVLDSAQKQMENTTKLPEGFAQDLAQSGSFGNPSAYQASVLDAL AQAHPGIADDPIVGKYINGGHFDPSTISAEPQSVKEAQRALDDWFKTTAPRDYNVNLDHWQAQEQMGGKYPNWQWDPHQ >Mature_239_residues MQGEYLSQYADSDPSYRQDPAIKPFKNIGEMRDMVSTSDKGHYAGEIINEQAQEQHQQLLNDAARTGSDHDLKAAGRLSQ GMLDGALDSVGEKPTDQNVEDLKKLIGKVPFASDAMDVLDSAQKQMENTTKLPEGFAQDLAQSGSFGNPSAYQASVLDAL AQAHPGIADDPIVGKYINGGHFDPSTISAEPQSVKEAQRALDDWFKTTAPRDYNVNLDHWQAQEQMGGKYPNWQWDPHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26307; Mature: 26307
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGEYLSQYADSDPSYRQDPAIKPFKNIGEMRDMVSTSDKGHYAGEIINEQAQEQHQQLL CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH NDAARTGSDHDLKAAGRLSQGMLDGALDSVGEKPTDQNVEDLKKLIGKVPFASDAMDVLD HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH SAQKQMENTTKLPEGFAQDLAQSGSFGNPSAYQASVLDALAQAHPGIADDPIVGKYINGG HHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC HFDPSTISAEPQSVKEAQRALDDWFKTTAPRDYNVNLDHWQAQEQMGGKYPNWQWDPHQ CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQGEYLSQYADSDPSYRQDPAIKPFKNIGEMRDMVSTSDKGHYAGEIINEQAQEQHQQLL CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH NDAARTGSDHDLKAAGRLSQGMLDGALDSVGEKPTDQNVEDLKKLIGKVPFASDAMDVLD HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH SAQKQMENTTKLPEGFAQDLAQSGSFGNPSAYQASVLDALAQAHPGIADDPIVGKYINGG HHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC HFDPSTISAEPQSVKEAQRALDDWFKTTAPRDYNVNLDHWQAQEQMGGKYPNWQWDPHQ CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA