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The map label for this gene is 169628175

Identifier: 169628175

GI number: 169628175

Start: 1094346

End: 1095017

Strand: Direct

Name: 169628175

Synonym: MAB_1080

Alternate gene names: NA

Gene position: 1094346-1095017 (Clockwise)

Preceding gene: 169628174

Following gene: 169628176

Centisome position: 21.6

GC content: 62.2

Gene sequence:

>672_bases
ATGAAGCTGTTGGGCAAGGTATCGGGCTGGGCCCGCCGCGGTGTGCTGGCGGTCGGCGCTCTGCTTATGACTCTTGTTGC
TCTCATTGCGACGACGGCGACGGCGCATGCGGGTCTAGATGATGAACTGACGCTGGTTGATGGCAAGGGGCGCTTGCTGC
GGATTCAGCAGTGGGACACTTTTCTCAACGGTGTGTTTCCGTTGGACCGCAACCGTCTGACGCGTGAGTGGTTCCACTCG
GGCCGTGCGGTTTATGAGGTGACGGGCGCAGGCTCGGACACCTTCGAGGGGACCCTGGAGTTGGGTTACCAGGTTGGTTA
CCCGTGGTCGTTGGGTGTGGGCTTGAACTTCAACTACACGACGCCCAACACCTCGATTCTCTACGGTATTCCGAACGCGT
TCGGCGGTAGCCCCGAAGCGTCGTATGTGCAGACGACCAACCTGTTGCCCAGTGCTGGTATCAACGTCGACCTGGGCAAC
GGCCCCGGCATTCAGGAAGTCGCCACCTTCTCGGTAGCGGTTGCCGGTCCGAAGGGTGCGGTGGCGGTGTCCAACGCGCA
CGGCACCGTGACCGGTGCGGCCGGTGGTGTGCTGCTTCGTCCCTACGCGCGGTTGATCAGTTCCGCCGGGGACAGTGTGA
CCACCTACGGCGAGACCTGGGACATGAAGTAG

Upstream 100 bases:

>100_bases
GAATGTTCAGATTGCCGCGCCGTCACCGTGCCGATATCGTCCTTCTGTCCGTCGCTAAGGAAATTCTCATGTTCGCCATG
AGGGGACTGATAGGAACAGA

Downstream 100 bases:

>100_bases
GCAGGTATCCCTGCCGCAACCAGGCGCCAAGGCCTACCCCATATCGGTCATTTCGCGGACGGTTGCTCGCGATGCCTCGT
CGCGGTGTTCGCGGCCGTTG

Product: porin precursor

Products: NA

Alternate protein names: Porin Protein MspA; MspD Protein

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKLLGKVSGWARRGVLAVGALLMTLVALIATTATAHAGLDDELTLVDGKGRLLRIQQWDTFLNGVFPLDRNRLTREWFHS
GRAVYEVTGAGSDTFEGTLELGYQVGYPWSLGVGLNFNYTTPNTSILYGIPNAFGGSPEASYVQTTNLLPSAGINVDLGN
GPGIQEVATFSVAVAGPKGAVAVSNAHGTVTGAAGGVLLRPYARLISSAGDSVTTYGETWDMK

Sequences:

>Translated_223_residues
MKLLGKVSGWARRGVLAVGALLMTLVALIATTATAHAGLDDELTLVDGKGRLLRIQQWDTFLNGVFPLDRNRLTREWFHS
GRAVYEVTGAGSDTFEGTLELGYQVGYPWSLGVGLNFNYTTPNTSILYGIPNAFGGSPEASYVQTTNLLPSAGINVDLGN
GPGIQEVATFSVAVAGPKGAVAVSNAHGTVTGAAGGVLLRPYARLISSAGDSVTTYGETWDMK
>Mature_223_residues
MKLLGKVSGWARRGVLAVGALLMTLVALIATTATAHAGLDDELTLVDGKGRLLRIQQWDTFLNGVFPLDRNRLTREWFHS
GRAVYEVTGAGSDTFEGTLELGYQVGYPWSLGVGLNFNYTTPNTSILYGIPNAFGGSPEASYVQTTNLLPSAGINVDLGN
GPGIQEVATFSVAVAGPKGAVAVSNAHGTVTGAAGGVLLRPYARLISSAGDSVTTYGETWDMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23393; Mature: 23393

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLGKVSGWARRGVLAVGALLMTLVALIATTATAHAGLDDELTLVDGKGRLLRIQQWDT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEHHH
FLNGVFPLDRNRLTREWFHSGRAVYEVTGAGSDTFEGTLELGYQVGYPWSLGVGLNFNYT
HHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEECCCEEECCEEEEEEC
TPNTSILYGIPNAFGGSPEASYVQTTNLLPSAGINVDLGNGPGIQEVATFSVAVAGPKGA
CCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCHHHHEEEEEEEECCCCE
VAVSNAHGTVTGAAGGVLLRPYARLISSAGDSVTTYGETWDMK
EEEECCCCEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCCCC
>Mature Secondary Structure
MKLLGKVSGWARRGVLAVGALLMTLVALIATTATAHAGLDDELTLVDGKGRLLRIQQWDT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEHHH
FLNGVFPLDRNRLTREWFHSGRAVYEVTGAGSDTFEGTLELGYQVGYPWSLGVGLNFNYT
HHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEECCCEEECCEEEEEEC
TPNTSILYGIPNAFGGSPEASYVQTTNLLPSAGINVDLGNGPGIQEVATFSVAVAGPKGA
CCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCHHHHEEEEEEEECCCCE
VAVSNAHGTVTGAAGGVLLRPYARLISSAGDSVTTYGETWDMK
EEEECCCCEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA