| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628105
Identifier: 169628105
GI number: 169628105
Start: 1016431
End: 1017927
Strand: Reverse
Name: 169628105
Synonym: MAB_1010c
Alternate gene names: NA
Gene position: 1017927-1016431 (Counterclockwise)
Preceding gene: 169628106
Following gene: 169628104
Centisome position: 20.09
GC content: 66.67
Gene sequence:
>1497_bases ATGATCGTGGTGGCCGCACTGGTCACCGGGCTCATGCTGCTGAAATCCACCGGTCGTCTCAACGACTTCGTGCGCGTAGT TGCCGACCTCAACAATGTGGGTGACGGCCTGCCGCAGAAGTCCGACGTGAAGTATCACGGCGTTCTCGTCGGCGAGGTCG ATGGAGTCACCCCCGCCTCCAACGGTCAGCCCAACTTCGTACACATCAACCTCAAGCCGCAGTACGCCAAATCCATTCCC AGCACCGCCACTGCCCGCGTAGTTCCGAGCAACGTCTTCGCGGTCTCCTCGGTGCAGCTGGTGGATCGCGGTCCGGGCGC TCCCATTCGTGCGGGTGCGCATATCGCCGAGGACACCCAACTGCCGACCGTGCTGTTCCAGACCACGGTGAGCAAGCTGC GCGACGTTCTGGTCGCCACGGGCCGCGGCCGAGACGACCACTCCGTCGGCATCCTGGCGGCCGTCGGCGCCGCGACCGAC AACCGCCGCGTCAAGCTGCTTACCGGCGGTGCGCAGCTGAATCGCCTTATCGCCCAGCTCAATGACATCGTGGTGACCGA CACCGGGCCGTCCACGGTAAAGGCTCTGCTCGATGCCACCGAGGGGCTCAAGCAGACGGCCCCCGAACTGATCGACTCGC TGCACCAGGCCGTCAAGCCGATGCAGACCTTCGTCGAGAAGCGCGAGCAACTGACCAGCCTGATCAACGGCGGCCTCACC ACGGTGGGCACCACTCGTCAGGCCTTCGACAACCACACCGATCAGCTGATCGGCATCACCACCGAGCTCACCCCCGTCAT CGGCACCTTCGCGAACAACGCGTCCAAGTTCCAGACGATCTTCCAGAAGGCAACACAGCTGGGAAACAAGTGGTTCGAGG AACCATGGAAGCCGGAAGTGGACACTCCCAACATGCGGGTGAATCTGTCCATGACACCCGGCTCCACCTACACCCGCGCG GACTGCCCCCGATACGGGGATCTCAAGGGACCGAGCTGCTTCACCGCTCCCGAGCTCGTGGTGCGGCCCGACCTGCCGGA AACACTGCTGCCGCAGAACTACAAGGTGCCGGCGGATCTGCAGCCGCCGCGCGGGACCGTGGTGGGGCCCAACGGAAACC TCATAGCCGTGGGACCCCCGTATGTCGTACCGCCGGGCGGACCGAACCTGACAGATCCGAACCCGCCTCTGCCGCCGTGG CAGCCGAATCCGTCGCCGCGCGTTCCCGGGACGGCCGATCCCGATCTGCTCGAACCACCGCCGCCCCCGCCCCCGCCGAT CCCCGCCGCGCCGGTAGCCCCCGGGGCGCGCGACGGCGGCGGCGCACCGATCGCGCCCGCCTCGTTCGGCGGCACGGTAG GCCCGGTGGGCAGCCAGGTCGAACGTGCTCAGCTCAGTGTCATCACCGATAAGCCGGCCAGCTCCGCCACACAGCTGCTG CTCGGCCCGGTCGTGCGAGGCACCACGGTCTCGCTCGCGAAGGAAGGATCCCCATGA
Upstream 100 bases:
>100_bases GGACGCCGGCGCCAGGCTGGGCGGCTAAATGGCGTCGAATTCCTTTGAGACAGACGGTCGTGGCCCCTCTGAGCGACTCC TGTTGGGTACCGGTGCCGCC
Downstream 100 bases:
>100_bases AGTTCCGTGGCCCGTTGATCGCGCTGACCGTCTTCATGGCGGTCGCGCTGGCGTTGACGTGGTTGGTGTACGCCACGCTG CGCCGCGACGTCGCCGGCGG
Product: putative MCE family protein
Products: NA
Alternate protein names: Virulence Factor Mce Family Protein; Secreted Protein; Mce Related Protein; MCE Family Protein; Mammalian Cell Entry Related Domain-Containing Protein; MCE-Family A; Mce Protein Mce5A; Mce-Related Protein; Mce Family A
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MIVVAALVTGLMLLKSTGRLNDFVRVVADLNNVGDGLPQKSDVKYHGVLVGEVDGVTPASNGQPNFVHINLKPQYAKSIP STATARVVPSNVFAVSSVQLVDRGPGAPIRAGAHIAEDTQLPTVLFQTTVSKLRDVLVATGRGRDDHSVGILAAVGAATD NRRVKLLTGGAQLNRLIAQLNDIVVTDTGPSTVKALLDATEGLKQTAPELIDSLHQAVKPMQTFVEKREQLTSLINGGLT TVGTTRQAFDNHTDQLIGITTELTPVIGTFANNASKFQTIFQKATQLGNKWFEEPWKPEVDTPNMRVNLSMTPGSTYTRA DCPRYGDLKGPSCFTAPELVVRPDLPETLLPQNYKVPADLQPPRGTVVGPNGNLIAVGPPYVVPPGGPNLTDPNPPLPPW QPNPSPRVPGTADPDLLEPPPPPPPPIPAAPVAPGARDGGGAPIAPASFGGTVGPVGSQVERAQLSVITDKPASSATQLL LGPVVRGTTVSLAKEGSP
Sequences:
>Translated_498_residues MIVVAALVTGLMLLKSTGRLNDFVRVVADLNNVGDGLPQKSDVKYHGVLVGEVDGVTPASNGQPNFVHINLKPQYAKSIP STATARVVPSNVFAVSSVQLVDRGPGAPIRAGAHIAEDTQLPTVLFQTTVSKLRDVLVATGRGRDDHSVGILAAVGAATD NRRVKLLTGGAQLNRLIAQLNDIVVTDTGPSTVKALLDATEGLKQTAPELIDSLHQAVKPMQTFVEKREQLTSLINGGLT TVGTTRQAFDNHTDQLIGITTELTPVIGTFANNASKFQTIFQKATQLGNKWFEEPWKPEVDTPNMRVNLSMTPGSTYTRA DCPRYGDLKGPSCFTAPELVVRPDLPETLLPQNYKVPADLQPPRGTVVGPNGNLIAVGPPYVVPPGGPNLTDPNPPLPPW QPNPSPRVPGTADPDLLEPPPPPPPPIPAAPVAPGARDGGGAPIAPASFGGTVGPVGSQVERAQLSVITDKPASSATQLL LGPVVRGTTVSLAKEGSP >Mature_498_residues MIVVAALVTGLMLLKSTGRLNDFVRVVADLNNVGDGLPQKSDVKYHGVLVGEVDGVTPASNGQPNFVHINLKPQYAKSIP STATARVVPSNVFAVSSVQLVDRGPGAPIRAGAHIAEDTQLPTVLFQTTVSKLRDVLVATGRGRDDHSVGILAAVGAATD NRRVKLLTGGAQLNRLIAQLNDIVVTDTGPSTVKALLDATEGLKQTAPELIDSLHQAVKPMQTFVEKREQLTSLINGGLT TVGTTRQAFDNHTDQLIGITTELTPVIGTFANNASKFQTIFQKATQLGNKWFEEPWKPEVDTPNMRVNLSMTPGSTYTRA DCPRYGDLKGPSCFTAPELVVRPDLPETLLPQNYKVPADLQPPRGTVVGPNGNLIAVGPPYVVPPGGPNLTDPNPPLPPW QPNPSPRVPGTADPDLLEPPPPPPPPIPAAPVAPGARDGGGAPIAPASFGGTVGPVGSQVERAQLSVITDKPASSATQLL LGPVVRGTTVSLAKEGSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52154; Mature: 52154
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVAALVTGLMLLKSTGRLNDFVRVVADLNNVGDGLPQKSDVKYHGVLVGEVDGVTPAS CEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCC NGQPNFVHINLKPQYAKSIPSTATARVVPSNVFAVSSVQLVDRGPGAPIRAGAHIAEDTQ CCCCCEEEEEECHHHHHCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCC LPTVLFQTTVSKLRDVLVATGRGRDDHSVGILAAVGAATDNRRVKLLTGGAQLNRLIAQL CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHH NDIVVTDTGPSTVKALLDATEGLKQTAPELIDSLHQAVKPMQTFVEKREQLTSLINGGLT CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TVGTTRQAFDNHTDQLIGITTELTPVIGTFANNASKFQTIFQKATQLGNKWFEEPWKPEV CCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC DTPNMRVNLSMTPGSTYTRADCPRYGDLKGPSCFTAPELVVRPDLPETLLPQNYKVPADL CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCCCCC QPPRGTVVGPNGNLIAVGPPYVVPPGGPNLTDPNPPLPPWQPNPSPRVPGTADPDLLEPP CCCCCEEECCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPPPPIPAAPVAPGARDGGGAPIAPASFGGTVGPVGSQVERAQLSVITDKPASSATQLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCHHHHHH LGPVVRGTTVSLAKEGSP HHHHHCCCEEEEECCCCC >Mature Secondary Structure MIVVAALVTGLMLLKSTGRLNDFVRVVADLNNVGDGLPQKSDVKYHGVLVGEVDGVTPAS CEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCC NGQPNFVHINLKPQYAKSIPSTATARVVPSNVFAVSSVQLVDRGPGAPIRAGAHIAEDTQ CCCCCEEEEEECHHHHHCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCC LPTVLFQTTVSKLRDVLVATGRGRDDHSVGILAAVGAATDNRRVKLLTGGAQLNRLIAQL CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHH NDIVVTDTGPSTVKALLDATEGLKQTAPELIDSLHQAVKPMQTFVEKREQLTSLINGGLT CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TVGTTRQAFDNHTDQLIGITTELTPVIGTFANNASKFQTIFQKATQLGNKWFEEPWKPEV CCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC DTPNMRVNLSMTPGSTYTRADCPRYGDLKGPSCFTAPELVVRPDLPETLLPQNYKVPADL CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCCCCC QPPRGTVVGPNGNLIAVGPPYVVPPGGPNLTDPNPPLPPWQPNPSPRVPGTADPDLLEPP CCCCCEEECCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPPPPIPAAPVAPGARDGGGAPIAPASFGGTVGPVGSQVERAQLSVITDKPASSATQLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCHHHHHH LGPVVRGTTVSLAKEGSP HHHHHCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA