| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628100
Identifier: 169628100
GI number: 169628100
Start: 1010653
End: 1011903
Strand: Reverse
Name: 169628100
Synonym: MAB_1005c
Alternate gene names: NA
Gene position: 1011903-1010653 (Counterclockwise)
Preceding gene: 169628101
Following gene: 169628099
Centisome position: 19.97
GC content: 64.35
Gene sequence:
>1251_bases ATGATCAACGCCATCGCCAACGGCCTCGTCGGCTCCGTTCGGGCCGCACATCGCAGGAAGATGCTGCTTTCCGGCATCGC GCTGGCAGCCGTGCTACTGATCGCCATCGGCTATCTGACGGTCGGCGCCTTGCGCGTCAGCCCGTTCTCCGGCACCTACC GCGTCAAGGTTCAGCTCCCGGAATCCGGTGGTCTGTTGCCGAATCAGGATGTCGCGCTGCGCGGCGTCAAGATCGGCACG GTCCAGTCGCTGGATATCACCCAACAGGGCGTCGACGCCGTCGCCGAGATCCAGTCGAAGTACAAGATCCCCGTCTCGGC GAAGGTGCGCGTCACCGGTCTCTCGCCGGCCGGTGAGCAGTACATCAACTTCGAGGGCGTCTCGGATCAAGGACCATTCC TCAAGGACGGCGCGGTCATCTCCCAGGGCGCCCAGGTTCCCGTCACGCTGGCCAAGCTGCTCGCCGACGCCGACGGGCTG CTGGCCCAGGTGGACCCCAAGAAGCTCGAGCTCATCAAGAAGGAACTGAGTCTGAGCAAGGAAGGCCCGCGCAAGCTCAC CGAGATCATCGATGGCGGCACCTTCCTGCTGAACACCCTCGACTCGGTGCTGCCCGAGACCACCAGCATCCTGCGGTCCA GCCGTGTGGTGCTGACCCTGGCCTCGGACAAGAACTCCGGCATCCAGGCCACCGCGAACGAACTGGGCCGCACACTGCGC GGTATCGACAAGATGCAGAACGGCTACCGCACGCTCGTCGACCGGACCCCCAACACCTTGCACTCGGTGGACAACCTGTT CGATGACAACTCGGACACCATGGTGACCCTATTGGGAAGTCTGGCGACCGCGTCTAAGCTGCTCTATCTGCGCGTTCCCG CGCTCAACGCGCTGTTCCCCAACTATCGCGGTTCGGTCTTCGACGCACTGATGAGCATCATGCACGAGGGCGGCATTTGG GCGACCGCCGATCTGTACCCGCGCTACGTGTGCGATTACCCGACGCCACGACTCCCGGGCTCAGCTGCCGACTACCCCGA ACCGTTCTTGTACGCCAACTATTGCGCGGACGAGGACCCGGCCGTGCTGATCCGCGGCGCCAAGAATGCGCCGCGACCAG CAGGGGACGACACCGCGGGGCCGCCCATGGGGGCCGATATGGGCAAGAAGGCCGATCCGACACCGAAGGGCCGGTTCCAG GTACCGACCCCATATGGTGGACCGACATTGCCGATCGAACCCCCACATTGA
Upstream 100 bases:
>100_bases GGCAGGCAGTTCCCGCTGCTGCCCCCGCAGAGACGACAACGCCCACACCGGCGCCCGCTCCTCCACCGGGGCCCGCCCCC GGGCCGGCGGTGATGGGCCA
Downstream 100 bases:
>100_bases TGCCTGACCTGCGAATCGGATACAAGGAGCTACTACCGTGGTCACCATGACCAAAGAAGACGTCGATTCCACAAACGACG CCGACACGGACACCGCCGAC
Product: putative MCE family protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; Mce Family F; MCE-Family F; Mce Related Protein; Mce-Related Protein; MCE-Family
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MINAIANGLVGSVRAAHRRKMLLSGIALAAVLLIAIGYLTVGALRVSPFSGTYRVKVQLPESGGLLPNQDVALRGVKIGT VQSLDITQQGVDAVAEIQSKYKIPVSAKVRVTGLSPAGEQYINFEGVSDQGPFLKDGAVISQGAQVPVTLAKLLADADGL LAQVDPKKLELIKKELSLSKEGPRKLTEIIDGGTFLLNTLDSVLPETTSILRSSRVVLTLASDKNSGIQATANELGRTLR GIDKMQNGYRTLVDRTPNTLHSVDNLFDDNSDTMVTLLGSLATASKLLYLRVPALNALFPNYRGSVFDALMSIMHEGGIW ATADLYPRYVCDYPTPRLPGSAADYPEPFLYANYCADEDPAVLIRGAKNAPRPAGDDTAGPPMGADMGKKADPTPKGRFQ VPTPYGGPTLPIEPPH
Sequences:
>Translated_416_residues MINAIANGLVGSVRAAHRRKMLLSGIALAAVLLIAIGYLTVGALRVSPFSGTYRVKVQLPESGGLLPNQDVALRGVKIGT VQSLDITQQGVDAVAEIQSKYKIPVSAKVRVTGLSPAGEQYINFEGVSDQGPFLKDGAVISQGAQVPVTLAKLLADADGL LAQVDPKKLELIKKELSLSKEGPRKLTEIIDGGTFLLNTLDSVLPETTSILRSSRVVLTLASDKNSGIQATANELGRTLR GIDKMQNGYRTLVDRTPNTLHSVDNLFDDNSDTMVTLLGSLATASKLLYLRVPALNALFPNYRGSVFDALMSIMHEGGIW ATADLYPRYVCDYPTPRLPGSAADYPEPFLYANYCADEDPAVLIRGAKNAPRPAGDDTAGPPMGADMGKKADPTPKGRFQ VPTPYGGPTLPIEPPH >Mature_416_residues MINAIANGLVGSVRAAHRRKMLLSGIALAAVLLIAIGYLTVGALRVSPFSGTYRVKVQLPESGGLLPNQDVALRGVKIGT VQSLDITQQGVDAVAEIQSKYKIPVSAKVRVTGLSPAGEQYINFEGVSDQGPFLKDGAVISQGAQVPVTLAKLLADADGL LAQVDPKKLELIKKELSLSKEGPRKLTEIIDGGTFLLNTLDSVLPETTSILRSSRVVLTLASDKNSGIQATANELGRTLR GIDKMQNGYRTLVDRTPNTLHSVDNLFDDNSDTMVTLLGSLATASKLLYLRVPALNALFPNYRGSVFDALMSIMHEGGIW ATADLYPRYVCDYPTPRLPGSAADYPEPFLYANYCADEDPAVLIRGAKNAPRPAGDDTAGPPMGADMGKKADPTPKGRFQ VPTPYGGPTLPIEPPH
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44313; Mature: 44313
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINAIANGLVGSVRAAHRRKMLLSGIALAAVLLIAIGYLTVGALRVSPFSGTYRVKVQLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEC ESGGLLPNQDVALRGVKIGTVQSLDITQQGVDAVAEIQSKYKIPVSAKVRVTGLSPAGEQ CCCCCCCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC YINFEGVSDQGPFLKDGAVISQGAQVPVTLAKLLADADGLLAQVDPKKLELIKKELSLSK EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCC EGPRKLTEIIDGGTFLLNTLDSVLPETTSILRSSRVVLTLASDKNSGIQATANELGRTLR CCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHH GIDKMQNGYRTLVDRTPNTLHSVDNLFDDNSDTMVTLLGSLATASKLLYLRVPALNALFP HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHCC NYRGSVFDALMSIMHEGGIWATADLYPRYVCDYPTPRLPGSAADYPEPFLYANYCADEDP CCCCHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCC AVLIRGAKNAPRPAGDDTAGPPMGADMGKKADPTPKGRFQVPTPYGGPTLPIEPPH EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure MINAIANGLVGSVRAAHRRKMLLSGIALAAVLLIAIGYLTVGALRVSPFSGTYRVKVQLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEC ESGGLLPNQDVALRGVKIGTVQSLDITQQGVDAVAEIQSKYKIPVSAKVRVTGLSPAGEQ CCCCCCCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC YINFEGVSDQGPFLKDGAVISQGAQVPVTLAKLLADADGLLAQVDPKKLELIKKELSLSK EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCC EGPRKLTEIIDGGTFLLNTLDSVLPETTSILRSSRVVLTLASDKNSGIQATANELGRTLR CCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHH GIDKMQNGYRTLVDRTPNTLHSVDNLFDDNSDTMVTLLGSLATASKLLYLRVPALNALFP HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHCC NYRGSVFDALMSIMHEGGIWATADLYPRYVCDYPTPRLPGSAADYPEPFLYANYCADEDP CCCCHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCC AVLIRGAKNAPRPAGDDTAGPPMGADMGKKADPTPKGRFQVPTPYGGPTLPIEPPH EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA