| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628072
Identifier: 169628072
GI number: 169628072
Start: 982872
End: 983618
Strand: Reverse
Name: 169628072
Synonym: MAB_0975c
Alternate gene names: NA
Gene position: 983618-982872 (Counterclockwise)
Preceding gene: 169628074
Following gene: 169628067
Centisome position: 19.41
GC content: 68.27
Gene sequence:
>747_bases GTGATCGTGCTGCTGCCGCCCTCGGAAACCAAACACGAAGGCGGCGACGGCCCACCTTTGCGCCTGAACGAATTGGCAAC GCCCACGCTGAACCCGGTGCGTGAAGCACTGGTGGACGAGCTCATCGCCCTTGCCGCCGACCCAGACGCGTGCAGGCAGG CACTGGGCATCTCCGCATCCCAGGATGCGGAGATTCAGCGCAACGCCGAGCTGCGCATGTCCCCCACCATGCCCGCCCTG CACCGGTACACCGGCGTGCTGTACGACAACCTGGACGTGACATCGCTGCGTGGCGCCTCCGCCGCCAGGGCACGTGCACG CCTCGCTGTCGGTTCGGCACTGTTCGGGCTGTTACGGGCCGATGATCCGGTGCCTGCCTACCGTCTGTCGGCGTCGTCCA AGCTGCCCGGAAAGCCCACCTTGGCCGCACGCTGGCGGCCGGTATTGGAGCCGGTGCTCGCCGAGCTGGCGGCAGGCGAG CTGGTGGTGGACCTGCGCTCGGGTTCCTATGCGGGCCTGGGCCGGCTACCCCACGCCGTGACGGTCGACTGCCTCACCGA GCATCCCGATGGCCGGCGCACGGTGATCACCCATTTCAACAAGGCGCACAAGGGGAAACTGGCGCGCATCCTGGCAGGAA GCCGTGCCGAACCCAACGACGCCGCGTCGGTGGCCACCGTCGCCCGCCGCGCGGGGCTACATGTCGAGCGCGACGGCAAT ACGCTGACGATCGTCGTCAGTCCTTAG
Upstream 100 bases:
>100_bases ATTCACCGGTATCGACCACTGCCGGATCGAAAACTCATCGCGGAAGGGGTTTGACCACCTCAGCGCGACGGACAGCAGCC CAGTTCGCTACGGTCTCTGC
Downstream 100 bases:
>100_bases AGCCGGAGTGCGACTTTCCTTCCGAGGAGTGCGACTTGCTCTCGGAGGAATGCGAGCTGCCCTCCGACGACGAACCGCTT TTTTCGGACGAAGACTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MIVLLPPSETKHEGGDGPPLRLNELATPTLNPVREALVDELIALAADPDACRQALGISASQDAEIQRNAELRMSPTMPAL HRYTGVLYDNLDVTSLRGASAARARARLAVGSALFGLLRADDPVPAYRLSASSKLPGKPTLAARWRPVLEPVLAELAAGE LVVDLRSGSYAGLGRLPHAVTVDCLTEHPDGRRTVITHFNKAHKGKLARILAGSRAEPNDAASVATVARRAGLHVERDGN TLTIVVSP
Sequences:
>Translated_248_residues MIVLLPPSETKHEGGDGPPLRLNELATPTLNPVREALVDELIALAADPDACRQALGISASQDAEIQRNAELRMSPTMPAL HRYTGVLYDNLDVTSLRGASAARARARLAVGSALFGLLRADDPVPAYRLSASSKLPGKPTLAARWRPVLEPVLAELAAGE LVVDLRSGSYAGLGRLPHAVTVDCLTEHPDGRRTVITHFNKAHKGKLARILAGSRAEPNDAASVATVARRAGLHVERDGN TLTIVVSP >Mature_248_residues MIVLLPPSETKHEGGDGPPLRLNELATPTLNPVREALVDELIALAADPDACRQALGISASQDAEIQRNAELRMSPTMPAL HRYTGVLYDNLDVTSLRGASAARARARLAVGSALFGLLRADDPVPAYRLSASSKLPGKPTLAARWRPVLEPVLAELAAGE LVVDLRSGSYAGLGRLPHAVTVDCLTEHPDGRRTVITHFNKAHKGKLARILAGSRAEPNDAASVATVARRAGLHVERDGN TLTIVVSP
Specific function: Unknown
COG id: COG3022
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0246 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005583 [H]
Pfam domain/function: PF03883 DUF328 [H]
EC number: NA
Molecular weight: Translated: 26292; Mature: 26292
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLLPPSETKHEGGDGPPLRLNELATPTLNPVREALVDELIALAADPDACRQALGISAS CEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC QDAEIQRNAELRMSPTMPALHRYTGVLYDNLDVTSLRGASAARARARLAVGSALFGLLRA CCCCHHCCCCEEECCCCHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC DDPVPAYRLSASSKLPGKPTLAARWRPVLEPVLAELAAGELVVDLRSGSYAGLGRLPHAV CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEE TVDCLTEHPDGRRTVITHFNKAHKGKLARILAGSRAEPNDAASVATVARRAGLHVERDGN EEEEECCCCCCCEEEEECCCHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEECCC TLTIVVSP EEEEEECC >Mature Secondary Structure MIVLLPPSETKHEGGDGPPLRLNELATPTLNPVREALVDELIALAADPDACRQALGISAS CEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC QDAEIQRNAELRMSPTMPALHRYTGVLYDNLDVTSLRGASAARARARLAVGSALFGLLRA CCCCHHCCCCEEECCCCHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC DDPVPAYRLSASSKLPGKPTLAARWRPVLEPVLAELAAGELVVDLRSGSYAGLGRLPHAV CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEE TVDCLTEHPDGRRTVITHFNKAHKGKLARILAGSRAEPNDAASVATVARRAGLHVERDGN EEEEECCCCCCCEEEEECCCHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEECCC TLTIVVSP EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA