| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628070
Identifier: 169628070
GI number: 169628070
Start: 980534
End: 980968
Strand: Direct
Name: 169628070
Synonym: MAB_0973
Alternate gene names: NA
Gene position: 980534-980968 (Clockwise)
Preceding gene: 169628069
Following gene: 169628071
Centisome position: 19.35
GC content: 61.38
Gene sequence:
>435_bases ATGCCGCGGGCTTCTTCTGATGAGGGTTCACCGGAAGAAAGTGGGATCCTGATCAATCGCGTCGAACTCACGCCGGCTGC GGCGGAATTGTTGGCTTCGCTGGTGGCCAAACATGGCCCTGTGATGTTCCACCAGTCCGGTGGCTGCTGTGACGGCAGCG CGCCGATGTGTTATCCGCGGGGAGAGTTCCGCGTCGGTGCATCGGATGTACTGCTCGGCGAAGTTAGCCGCGATACCCCA TTCTGGATGAGTGCAGACCAGTTCGAGTACTGGTCGCATACACATCTGACGGTCGACGTGGTACCTGGGCGGGGATCGGG ATTTTCGCTGGAGGCACCCGAGGGGGTGCGGTTTCTGATCCGCTCCAGGCTTTTCACCGATGACGAGGTGCTGGCATTGG CGAATCAGCCGGTCCGAACCGGCGCCGACGGCTGA
Upstream 100 bases:
>100_bases TTCGGCGGCTACAAGAAGTCGGGCATCGGGCGTGAGAACCACAAGATGATGCTCGACCACTATCAGCAGACCAAGAACAT CTTGGTGAGCTATTCGCCCG
Downstream 100 bases:
>100_bases GGCGGCCGCACCGCGTTCGTGTTGTCCGCGGCGCGGGTAGGTAGTAGTTTGCCCTTGTCGGAGTCGGTCTGGTTGGCCGT GGGGAGTGTTGTTATGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPRASSDEGSPEESGILINRVELTPAAAELLASLVAKHGPVMFHQSGGCCDGSAPMCYPRGEFRVGASDVLLGEVSRDTP FWMSADQFEYWSHTHLTVDVVPGRGSGFSLEAPEGVRFLIRSRLFTDDEVLALANQPVRTGADG
Sequences:
>Translated_144_residues MPRASSDEGSPEESGILINRVELTPAAAELLASLVAKHGPVMFHQSGGCCDGSAPMCYPRGEFRVGASDVLLGEVSRDTP FWMSADQFEYWSHTHLTVDVVPGRGSGFSLEAPEGVRFLIRSRLFTDDEVLALANQPVRTGADG >Mature_143_residues PRASSDEGSPEESGILINRVELTPAAAELLASLVAKHGPVMFHQSGGCCDGSAPMCYPRGEFRVGASDVLLGEVSRDTPF WMSADQFEYWSHTHLTVDVVPGRGSGFSLEAPEGVRFLIRSRLFTDDEVLALANQPVRTGADG
Specific function: Unknown
COG id: COG3564
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15465; Mature: 15334
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRASSDEGSPEESGILINRVELTPAAAELLASLVAKHGPVMFHQSGGCCDGSAPMCYPR CCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCC GEFRVGASDVLLGEVSRDTPFWMSADQFEYWSHTHLTVDVVPGRGSGFSLEAPEGVRFLI CCEEECCCCEEEEECCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH RSRLFTDDEVLALANQPVRTGADG HHHCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure PRASSDEGSPEESGILINRVELTPAAAELLASLVAKHGPVMFHQSGGCCDGSAPMCYPR CCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCC GEFRVGASDVLLGEVSRDTPFWMSADQFEYWSHTHLTVDVVPGRGSGFSLEAPEGVRFLI CCEEECCCCEEEEECCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH RSRLFTDDEVLALANQPVRTGADG HHHCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA