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The map label for this gene is 169628045

Identifier: 169628045

GI number: 169628045

Start: 955048

End: 956517

Strand: Reverse

Name: 169628045

Synonym: MAB_0948c

Alternate gene names: NA

Gene position: 956517-955048 (Counterclockwise)

Preceding gene: 169628046

Following gene: 169628044

Centisome position: 18.88

GC content: 65.03

Gene sequence:

>1470_bases
ATGGGCCTTTCAGAATCCGATCGATACGACACGGTCATCGTCGGCGGTGGCCACAACGCCCTGACCGCGGCCGCTTACCT
GGCCCGCGCGGGGCAGCGCGTGATGCTGCTGGAGCGGCTCGACGTATTTGGTGGTGCGGCGATCTCGGCACCGGCCTTTG
AGGGCGTCGAGGCGCGGTTGTCCCGCTATTCGTATCTGGTGAGCTTGATGCCGCGGCAGATCATCGACGACCTGGGCCTG
GACGTCCGCCTGGCCCGACGCAAGTACGCGTCATACACGCCGGATCCGATGAATGGAGGTCAGCGCGGATTTCTGGCCGG
CCCCAACGATTTCGCAGAGTTTGGCGCGCTCTGCGATTCCGTGACCCGGCCGATGTGGGATTCAATGCTGCAACCGCTAC
GCCGACGTGGCGCCGTGCGCACCGGCGCCTGGGAGCAGCTGATCGAAACGCCGATCGGCGAGGTGATCCGTGCCGCCACG
CCCGACGATGTACGGCGCGGGGTACTGCTCACCGACGCGCTCATCGGGACTTTCGCGAGTGCCGATGATCTGTCCCTGCA
ACAGAATATCTGCTTTCTGTATCACCAGATGAATCCCTGGGATGTCCCGATCGGCGGAATGGGTGCCGTGACCGGCTCGC
TGGAGGCGTCGGCGCGACGGCACGGTGCCGAGTTGCTGTCCGGGGCGGAGGTCTTGTCGATCTCGCCGGATGCAGAGGTG
CGATACCGCAGTGACGGTGGCGAGCACACCGTCGCCGGCGACCGGGTGCTCAGCGGCGTCAGCCCCACCGTGCTGGCCGG
CCTCCTCGGCGAGACCCCACCCGCGGGACAGCCGGGCGCACAGGTGAAGGTGAATCTGCTGTTGAGGCGGCTGCCACGGC
TGCGTGACGAAAATGTCACTCCCGAGCAGGCTTTCGGTGGAACATTCCACGTCAATGAGACCTATACCCAACTGGAATAC
GCCTACCAGCAGGCATCACACGGCCGGATCCCCGACCCGCTGCCATGCGAGATCTACTGTCATTCCCTGGCCGACCCCAG
CATCTTGTCACCGGAGCTGCGCGCCTCTGGGGCGCACACGCTGACAGTTTTTGGCCTGCATACACCGCACGGGCTCGGCG
CCAGCGCCGAACAGCTTCAACAGGCGGTGCTTGCTTCGCTGAGTTCCGTTCTTGCCGAGCCGATCACCGATGTGGTGGCC
ACAGATACGCACGGCAGGCCATGCATCGAGACCAAGACCACCATCGACCTGGAAAGTGCCCTCGGGATGACGGCAGGCAA
TATTTTTCACGGCGGCCTGCAGTGGCCCTTCGCCGAGGACGACGACCCGCTGGAGACCGCCGCGCAGCGCTGGGGCGTGG
CCACGAATCATGATCGAATACTGTTGTGCGGCTCGGGGTCTCGTCGAGGCGGCGGTGTTTCTGGGTTGGGCGGATATCAC
GCCGCGAGGGCAGTGCTGGAGACGCACTGA

Upstream 100 bases:

>100_bases
CGCTGGTGTTCTCGCGATCGGACGTGGACTGGTTCTGCACCGAACTCGACGACGTACTGAAAAGCACCGGCTGATCACCC
GAAGGCCGTACAGTCGTTTC

Downstream 100 bases:

>100_bases
GCCGCACTCCACAGCGAGGTTTCACACCGGCTGGTAGCGGGTACGCGCGCGGTATGACACGTTTCGGCTATACCTTGATG
ACAGAGCAGAGCGGACCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MGLSESDRYDTVIVGGGHNALTAAAYLARAGQRVMLLERLDVFGGAAISAPAFEGVEARLSRYSYLVSLMPRQIIDDLGL
DVRLARRKYASYTPDPMNGGQRGFLAGPNDFAEFGALCDSVTRPMWDSMLQPLRRRGAVRTGAWEQLIETPIGEVIRAAT
PDDVRRGVLLTDALIGTFASADDLSLQQNICFLYHQMNPWDVPIGGMGAVTGSLEASARRHGAELLSGAEVLSISPDAEV
RYRSDGGEHTVAGDRVLSGVSPTVLAGLLGETPPAGQPGAQVKVNLLLRRLPRLRDENVTPEQAFGGTFHVNETYTQLEY
AYQQASHGRIPDPLPCEIYCHSLADPSILSPELRASGAHTLTVFGLHTPHGLGASAEQLQQAVLASLSSVLAEPITDVVA
TDTHGRPCIETKTTIDLESALGMTAGNIFHGGLQWPFAEDDDPLETAAQRWGVATNHDRILLCGSGSRRGGGVSGLGGYH
AARAVLETH

Sequences:

>Translated_489_residues
MGLSESDRYDTVIVGGGHNALTAAAYLARAGQRVMLLERLDVFGGAAISAPAFEGVEARLSRYSYLVSLMPRQIIDDLGL
DVRLARRKYASYTPDPMNGGQRGFLAGPNDFAEFGALCDSVTRPMWDSMLQPLRRRGAVRTGAWEQLIETPIGEVIRAAT
PDDVRRGVLLTDALIGTFASADDLSLQQNICFLYHQMNPWDVPIGGMGAVTGSLEASARRHGAELLSGAEVLSISPDAEV
RYRSDGGEHTVAGDRVLSGVSPTVLAGLLGETPPAGQPGAQVKVNLLLRRLPRLRDENVTPEQAFGGTFHVNETYTQLEY
AYQQASHGRIPDPLPCEIYCHSLADPSILSPELRASGAHTLTVFGLHTPHGLGASAEQLQQAVLASLSSVLAEPITDVVA
TDTHGRPCIETKTTIDLESALGMTAGNIFHGGLQWPFAEDDDPLETAAQRWGVATNHDRILLCGSGSRRGGGVSGLGGYH
AARAVLETH
>Mature_488_residues
GLSESDRYDTVIVGGGHNALTAAAYLARAGQRVMLLERLDVFGGAAISAPAFEGVEARLSRYSYLVSLMPRQIIDDLGLD
VRLARRKYASYTPDPMNGGQRGFLAGPNDFAEFGALCDSVTRPMWDSMLQPLRRRGAVRTGAWEQLIETPIGEVIRAATP
DDVRRGVLLTDALIGTFASADDLSLQQNICFLYHQMNPWDVPIGGMGAVTGSLEASARRHGAELLSGAEVLSISPDAEVR
YRSDGGEHTVAGDRVLSGVSPTVLAGLLGETPPAGQPGAQVKVNLLLRRLPRLRDENVTPEQAFGGTFHVNETYTQLEYA
YQQASHGRIPDPLPCEIYCHSLADPSILSPELRASGAHTLTVFGLHTPHGLGASAEQLQQAVLASLSSVLAEPITDVVAT
DTHGRPCIETKTTIDLESALGMTAGNIFHGGLQWPFAEDDDPLETAAQRWGVATNHDRILLCGSGSRRGGGVSGLGGYHA
ARAVLETH

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=566, Percent_Identity=27.208480565371, Blast_Score=122, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17540238, Length=554, Percent_Identity=26.5342960288809, Blast_Score=131, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52217; Mature: 52086

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSESDRYDTVIVGGGHNALTAAAYLARAGQRVMLLERLDVFGGAAISAPAFEGVEARL
CCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SRYSYLVSLMPRQIIDDLGLDVRLARRKYASYTPDPMNGGQRGFLAGPNDFAEFGALCDS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VTRPMWDSMLQPLRRRGAVRTGAWEQLIETPIGEVIRAATPDDVRRGVLLTDALIGTFAS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHCCCCHHHHCCCHHHHHHHHHHCC
ADDLSLQQNICFLYHQMNPWDVPIGGMGAVTGSLEASARRHGAELLSGAEVLSISPDAEV
CCCCHHHHCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCE
RYRSDGGEHTVAGDRVLSGVSPTVLAGLLGETPPAGQPGAQVKVNLLLRRLPRLRDENVT
EECCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PEQAFGGTFHVNETYTQLEYAYQQASHGRIPDPLPCEIYCHSLADPSILSPELRASGAHT
HHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHECCCCCCCCCCCHHHCCCCCE
LTVFGLHTPHGLGASAEQLQQAVLASLSSVLAEPITDVVATDTHGRPCIETKTTIDLESA
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHH
LGMTAGNIFHGGLQWPFAEDDDPLETAAQRWGVATNHDRILLCGSGSRRGGGVSGLGGYH
CCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHH
AARAVLETH
HHHHHHHCC
>Mature Secondary Structure 
GLSESDRYDTVIVGGGHNALTAAAYLARAGQRVMLLERLDVFGGAAISAPAFEGVEARL
CCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SRYSYLVSLMPRQIIDDLGLDVRLARRKYASYTPDPMNGGQRGFLAGPNDFAEFGALCDS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VTRPMWDSMLQPLRRRGAVRTGAWEQLIETPIGEVIRAATPDDVRRGVLLTDALIGTFAS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHCCCCHHHHCCCHHHHHHHHHHCC
ADDLSLQQNICFLYHQMNPWDVPIGGMGAVTGSLEASARRHGAELLSGAEVLSISPDAEV
CCCCHHHHCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCE
RYRSDGGEHTVAGDRVLSGVSPTVLAGLLGETPPAGQPGAQVKVNLLLRRLPRLRDENVT
EECCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PEQAFGGTFHVNETYTQLEYAYQQASHGRIPDPLPCEIYCHSLADPSILSPELRASGAHT
HHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHECCCCCCCCCCCHHHCCCCCE
LTVFGLHTPHGLGASAEQLQQAVLASLSSVLAEPITDVVATDTHGRPCIETKTTIDLESA
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHH
LGMTAGNIFHGGLQWPFAEDDDPLETAAQRWGVATNHDRILLCGSGSRRGGGVSGLGGYH
CCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHH
AARAVLETH
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]