Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169628040

Identifier: 169628040

GI number: 169628040

Start: 949929

End: 950708

Strand: Direct

Name: 169628040

Synonym: MAB_0943

Alternate gene names: NA

Gene position: 949929-950708 (Clockwise)

Preceding gene: 169628039

Following gene: 169628041

Centisome position: 18.75

GC content: 66.92

Gene sequence:

>780_bases
ATGACTTCCGCTGCGACACAGATCGCGATTGTGTTGTATCCCGATTTCACCGCGCTGGATTTCATCGGACCATACGAGGT
GTTGCGCTTCATCCCCGACACCGAGGTTCGATTCGTATGGCATGAGCCCGGACCCGTCACCGCCGATTCCGGTGTGCTGG
TCATCGGTGCCACCCACTCCTTCGGCGAGACTCCCGCGCCCGACGTCGTGCTGGTACCGGGCGGCCCGGGAACAACGATG
GCCGCGCGTGACGACAAACTGCTGGACTGGTTGCGCCGGGTGCATCCCGCGGCTGCCTGGACCACGTCGGTGTGTAGCGG
TTCGCTGGTACTGGCCGCGGCCGGTCTGCTGGAAGGGCAACGGGCCACCTCGCATTGGTCGACACTGCCACTGCTGAAGC
CGTTCGGGGTGACCCCGGTCGGCGATGAGCGCATCGTGCGTACCGGCCACGCGGGTCTGGTGACCGCGGCGGGTGTGTCA
GCCGGCATCGATCTGGGGTTGTGGCTGGCGGGCCAGATCGCCGGGGAGGAGCGGGCCAAGGCCATCCAGTTGAGCATCGA
ATACGACCCGCAACCGCCGTTCGATTCCGGGCACATGTCCAAGGCCAGCGCAGCCACCAAGGCCACCGCGACGGCAGGAC
TGGCCAAGGACACTTTCAAACCGTCGGTTATGGCGGCGGGAGCAAAGCTGTTATGGGACGGTGCGCTGGCGACGGCGCGC
AGAAGGGGGGACCGGCGCCGGTCGTTCGGCAGCCGCCTGGACCCCCGAGCCCGACCCTGA

Upstream 100 bases:

>100_bases
TTGGATCGGCGGAATCCTTGCGCCGCAACTTCGTTCGGCGCATGGGTGTATCGCCCGATCAATACCGCAAAACTTTCCAA
CGAACCGACAGGAGTTCCGT

Downstream 100 bases:

>100_bases
CCAGGCGGCCCGGAGGCGGAGCGACTACCTTCTTCTCTAGCCCGCTCAACCTCAGAAGGGATGCCTGTGGCCGACAACAA
TGATTTCGCTACTCTCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator; AraC Family Transcriptional Regulator; ThiJ/PfpI; DJ-1/PfpI Family Protein; Transcriptional Regulator AraC Family; Isonitrile Hydratase; ThiJ Family Protein; AraC Family Transcription Regulator; DJ-1/PfpI Superfamily Protein; DJ-1/PfpI Family; Intracellular Protease/Amidase; Transcription Regulator Protein; Transcription Regulator Protein ThiJ/PfpI; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; Transcriptional Regulator Protein Thij/Pfpi; ThiH/PfpI Family Amidotransferase; Transcriptional Regulator Protein; ADPA-Family Transcriptional Regulator; ThiJ/PfpI Family Transcriptional Regulator Protein; Intracellular Protease/Amidase Protein; Transcriptional Regulatory Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator DarR; Transcriptional Regulator ThiJ/PfpI Family Protein; Thij/Pfpi Family Protein; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADSGVLVIGATHSFGETPAPDVVLVPGGPGTTM
AARDDKLLDWLRRVHPAAAWTTSVCSGSLVLAAAGLLEGQRATSHWSTLPLLKPFGVTPVGDERIVRTGHAGLVTAAGVS
AGIDLGLWLAGQIAGEERAKAIQLSIEYDPQPPFDSGHMSKASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATAR
RRGDRRRSFGSRLDPRARP

Sequences:

>Translated_259_residues
MTSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADSGVLVIGATHSFGETPAPDVVLVPGGPGTTM
AARDDKLLDWLRRVHPAAAWTTSVCSGSLVLAAAGLLEGQRATSHWSTLPLLKPFGVTPVGDERIVRTGHAGLVTAAGVS
AGIDLGLWLAGQIAGEERAKAIQLSIEYDPQPPFDSGHMSKASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATAR
RRGDRRRSFGSRLDPRARP
>Mature_258_residues
TSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADSGVLVIGATHSFGETPAPDVVLVPGGPGTTMA
ARDDKLLDWLRRVHPAAAWTTSVCSGSLVLAAAGLLEGQRATSHWSTLPLLKPFGVTPVGDERIVRTGHAGLVTAAGVSA
GIDLGLWLAGQIAGEERAKAIQLSIEYDPQPPFDSGHMSKASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATARR
RGDRRRSFGSRLDPRARP

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27271; Mature: 27140

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADSGVLVIGATHS
CCCCCEEEEEEEECCCHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCC
FGETPAPDVVLVPGGPGTTMAARDDKLLDWLRRVHPAAAWTTSVCSGSLVLAAAGLLEGQ
CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCC
RATSHWSTLPLLKPFGVTPVGDERIVRTGHAGLVTAAGVSAGIDLGLWLAGQIAGEERAK
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCE
AIQLSIEYDPQPPFDSGHMSKASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATAR
EEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCHHHHCCCCEEEHHHHHHHH
RRGDRRRSFGSRLDPRARP
HHCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADSGVLVIGATHS
CCCCEEEEEEEECCCHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCC
FGETPAPDVVLVPGGPGTTMAARDDKLLDWLRRVHPAAAWTTSVCSGSLVLAAAGLLEGQ
CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCC
RATSHWSTLPLLKPFGVTPVGDERIVRTGHAGLVTAAGVSAGIDLGLWLAGQIAGEERAK
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCE
AIQLSIEYDPQPPFDSGHMSKASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATAR
EEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCHHHHCCCCEEEHHHHHHHH
RRGDRRRSFGSRLDPRARP
HHCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA