| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628040
Identifier: 169628040
GI number: 169628040
Start: 949929
End: 950708
Strand: Direct
Name: 169628040
Synonym: MAB_0943
Alternate gene names: NA
Gene position: 949929-950708 (Clockwise)
Preceding gene: 169628039
Following gene: 169628041
Centisome position: 18.75
GC content: 66.92
Gene sequence:
>780_bases ATGACTTCCGCTGCGACACAGATCGCGATTGTGTTGTATCCCGATTTCACCGCGCTGGATTTCATCGGACCATACGAGGT GTTGCGCTTCATCCCCGACACCGAGGTTCGATTCGTATGGCATGAGCCCGGACCCGTCACCGCCGATTCCGGTGTGCTGG TCATCGGTGCCACCCACTCCTTCGGCGAGACTCCCGCGCCCGACGTCGTGCTGGTACCGGGCGGCCCGGGAACAACGATG GCCGCGCGTGACGACAAACTGCTGGACTGGTTGCGCCGGGTGCATCCCGCGGCTGCCTGGACCACGTCGGTGTGTAGCGG TTCGCTGGTACTGGCCGCGGCCGGTCTGCTGGAAGGGCAACGGGCCACCTCGCATTGGTCGACACTGCCACTGCTGAAGC CGTTCGGGGTGACCCCGGTCGGCGATGAGCGCATCGTGCGTACCGGCCACGCGGGTCTGGTGACCGCGGCGGGTGTGTCA GCCGGCATCGATCTGGGGTTGTGGCTGGCGGGCCAGATCGCCGGGGAGGAGCGGGCCAAGGCCATCCAGTTGAGCATCGA ATACGACCCGCAACCGCCGTTCGATTCCGGGCACATGTCCAAGGCCAGCGCAGCCACCAAGGCCACCGCGACGGCAGGAC TGGCCAAGGACACTTTCAAACCGTCGGTTATGGCGGCGGGAGCAAAGCTGTTATGGGACGGTGCGCTGGCGACGGCGCGC AGAAGGGGGGACCGGCGCCGGTCGTTCGGCAGCCGCCTGGACCCCCGAGCCCGACCCTGA
Upstream 100 bases:
>100_bases TTGGATCGGCGGAATCCTTGCGCCGCAACTTCGTTCGGCGCATGGGTGTATCGCCCGATCAATACCGCAAAACTTTCCAA CGAACCGACAGGAGTTCCGT
Downstream 100 bases:
>100_bases CCAGGCGGCCCGGAGGCGGAGCGACTACCTTCTTCTCTAGCCCGCTCAACCTCAGAAGGGATGCCTGTGGCCGACAACAA TGATTTCGCTACTCTCCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator; AraC Family Transcriptional Regulator; ThiJ/PfpI; DJ-1/PfpI Family Protein; Transcriptional Regulator AraC Family; Isonitrile Hydratase; ThiJ Family Protein; AraC Family Transcription Regulator; DJ-1/PfpI Superfamily Protein; DJ-1/PfpI Family; Intracellular Protease/Amidase; Transcription Regulator Protein; Transcription Regulator Protein ThiJ/PfpI; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; Transcriptional Regulator Protein Thij/Pfpi; ThiH/PfpI Family Amidotransferase; Transcriptional Regulator Protein; ADPA-Family Transcriptional Regulator; ThiJ/PfpI Family Transcriptional Regulator Protein; Intracellular Protease/Amidase Protein; Transcriptional Regulatory Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator DarR; Transcriptional Regulator ThiJ/PfpI Family Protein; Thij/Pfpi Family Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADSGVLVIGATHSFGETPAPDVVLVPGGPGTTM AARDDKLLDWLRRVHPAAAWTTSVCSGSLVLAAAGLLEGQRATSHWSTLPLLKPFGVTPVGDERIVRTGHAGLVTAAGVS AGIDLGLWLAGQIAGEERAKAIQLSIEYDPQPPFDSGHMSKASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATAR RRGDRRRSFGSRLDPRARP
Sequences:
>Translated_259_residues MTSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADSGVLVIGATHSFGETPAPDVVLVPGGPGTTM AARDDKLLDWLRRVHPAAAWTTSVCSGSLVLAAAGLLEGQRATSHWSTLPLLKPFGVTPVGDERIVRTGHAGLVTAAGVS AGIDLGLWLAGQIAGEERAKAIQLSIEYDPQPPFDSGHMSKASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATAR RRGDRRRSFGSRLDPRARP >Mature_258_residues TSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADSGVLVIGATHSFGETPAPDVVLVPGGPGTTMA ARDDKLLDWLRRVHPAAAWTTSVCSGSLVLAAAGLLEGQRATSHWSTLPLLKPFGVTPVGDERIVRTGHAGLVTAAGVSA GIDLGLWLAGQIAGEERAKAIQLSIEYDPQPPFDSGHMSKASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATARR RGDRRRSFGSRLDPRARP
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27271; Mature: 27140
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADSGVLVIGATHS CCCCCEEEEEEEECCCHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCC FGETPAPDVVLVPGGPGTTMAARDDKLLDWLRRVHPAAAWTTSVCSGSLVLAAAGLLEGQ CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCC RATSHWSTLPLLKPFGVTPVGDERIVRTGHAGLVTAAGVSAGIDLGLWLAGQIAGEERAK CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCE AIQLSIEYDPQPPFDSGHMSKASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATAR EEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCHHHHCCCCEEEHHHHHHHH RRGDRRRSFGSRLDPRARP HHCHHHHHHCCCCCCCCCC >Mature Secondary Structure TSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADSGVLVIGATHS CCCCEEEEEEEECCCHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCC FGETPAPDVVLVPGGPGTTMAARDDKLLDWLRRVHPAAAWTTSVCSGSLVLAAAGLLEGQ CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCC RATSHWSTLPLLKPFGVTPVGDERIVRTGHAGLVTAAGVSAGIDLGLWLAGQIAGEERAK CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCE AIQLSIEYDPQPPFDSGHMSKASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATAR EEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCHHHHCCCCEEEHHHHHHHH RRGDRRRSFGSRLDPRARP HHCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA