| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628018
Identifier: 169628018
GI number: 169628018
Start: 912226
End: 913455
Strand: Direct
Name: 169628018
Synonym: MAB_0919
Alternate gene names: NA
Gene position: 912226-913455 (Clockwise)
Preceding gene: 169628011
Following gene: 169628019
Centisome position: 18.0
GC content: 64.88
Gene sequence:
>1230_bases GTGAAGATACTGGCTTTGGGCGGCGCGGGTGCGATGGGGGCGGCGGCTGTACGCGCCGCACTCGATATACCCGGTGTCGA GGAGATTGTCGTCGCCGACCAAGATCTGGGTGCTGCCGAGGCTCTAGTACGACGCCTGGGGGAGGGGCCGGTCCCGACTC GAGCTATGTGCGTTGACGTGACCGATGCGGGAGCGCTCAGGACAGCACTCGAAGATGTTGATCTGGTCCTGAACACCGTC GGTCCCTACTTCCGTTTTGGATTGACGGTGCTGCGCATGGCAATTGAGACCAGAACCCACTACCTGGACATCTGCGATGA TTGGGAGCCCACGTTGCAGATGCTCGGCCTTGACGAGATCGCACGTGCGCACGGTGTCTGTGCGGTGATCGGTATGGGTG CCAGCCCGGGAATCAGCAATCTGCTTGCCGCCACCGCCGCTGCGGAACTCGATGAGGTAGATGACGTCTACACGGCATGG CCGGTGGATGTCGGCGGCAGCGGTGCGGATACCGAAGAAAAGTCGCAGCTGTTGGGGGCAGACGGCCGGCCTACCGCCGC GGCGACGCATTGGATGGAGCAGGCCAGCGGCACGATCACCGCGGTCGGTGCCGGAAGGCTCGTGGAGAAGCGTCCGCTGA GCCCGGTCTCGTTGGAATTGCCCGCGGGGCGCCGGGGCACGGCCTACTCGATAGGCCATCCGGAGCCGATCACTGTGCAG CGCACGCTGAAACCGCGTGGCGACGCGCTGAATCTGATGGTCATCAAGCCCTGGACCGTGGCGTATCTCGACACACTGCG GCGCGACATGGACGCGGGCCGGCTGAGCAGAGAAGAAGCCGCGGAGGCATTCGCGGTGCCCAAGTTCCGCCGCGTGCTGC GTTCCGCCTATGTGGCACTTCGTCTCCGGGGGCCGGGCACACTCCCGCCGTTCTTCGCCGCAGTCACCGGCGAGCGGCAC GAAAATCGATATACTGTGCTCGCCCGGTTGAATCTGGAAGGATCGCAATCGCATCCGATCAGAACTGCGTTGCGCGATAT GGCGCGTATCACGGGCGTGCCGCTGGCGCTGGGGATGGCGCAGGTGATCGACGGGTCCGGCCGCCGCCCGGGCGTTCACC CGCCGGAGGCCGTCATCGAACCCGCGCGTTTTTTTGCCGATCTCGCCGTGGCCCTTGGATGTGACAGCGGAGTATCGCCC TACTTGGTTGAGCAGCAACCGCTGCCATGA
Upstream 100 bases:
>100_bases TTTGCTGACCGCCGGCCGCCCCCGCGACCACGGGCGACTACCTGATCAAATCTATCGGATAGATAACGATCGTTTGTGAT TTGATAGGTACTATGGCGGT
Downstream 100 bases:
>100_bases TCCGATCGCTGGCGCACCGAACGTAGGATGATTGAACACAATTCGCACGCTGCTGTTTCGGAGGTGAATGCTTGGACATC CAACACGTGCTGAACGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MKILALGGAGAMGAAAVRAALDIPGVEEIVVADQDLGAAEALVRRLGEGPVPTRAMCVDVTDAGALRTALEDVDLVLNTV GPYFRFGLTVLRMAIETRTHYLDICDDWEPTLQMLGLDEIARAHGVCAVIGMGASPGISNLLAATAAAELDEVDDVYTAW PVDVGGSGADTEEKSQLLGADGRPTAAATHWMEQASGTITAVGAGRLVEKRPLSPVSLELPAGRRGTAYSIGHPEPITVQ RTLKPRGDALNLMVIKPWTVAYLDTLRRDMDAGRLSREEAAEAFAVPKFRRVLRSAYVALRLRGPGTLPPFFAAVTGERH ENRYTVLARLNLEGSQSHPIRTALRDMARITGVPLALGMAQVIDGSGRRPGVHPPEAVIEPARFFADLAVALGCDSGVSP YLVEQQPLP
Sequences:
>Translated_409_residues MKILALGGAGAMGAAAVRAALDIPGVEEIVVADQDLGAAEALVRRLGEGPVPTRAMCVDVTDAGALRTALEDVDLVLNTV GPYFRFGLTVLRMAIETRTHYLDICDDWEPTLQMLGLDEIARAHGVCAVIGMGASPGISNLLAATAAAELDEVDDVYTAW PVDVGGSGADTEEKSQLLGADGRPTAAATHWMEQASGTITAVGAGRLVEKRPLSPVSLELPAGRRGTAYSIGHPEPITVQ RTLKPRGDALNLMVIKPWTVAYLDTLRRDMDAGRLSREEAAEAFAVPKFRRVLRSAYVALRLRGPGTLPPFFAAVTGERH ENRYTVLARLNLEGSQSHPIRTALRDMARITGVPLALGMAQVIDGSGRRPGVHPPEAVIEPARFFADLAVALGCDSGVSP YLVEQQPLP >Mature_409_residues MKILALGGAGAMGAAAVRAALDIPGVEEIVVADQDLGAAEALVRRLGEGPVPTRAMCVDVTDAGALRTALEDVDLVLNTV GPYFRFGLTVLRMAIETRTHYLDICDDWEPTLQMLGLDEIARAHGVCAVIGMGASPGISNLLAATAAAELDEVDDVYTAW PVDVGGSGADTEEKSQLLGADGRPTAAATHWMEQASGTITAVGAGRLVEKRPLSPVSLELPAGRRGTAYSIGHPEPITVQ RTLKPRGDALNLMVIKPWTVAYLDTLRRDMDAGRLSREEAAEAFAVPKFRRVLRSAYVALRLRGPGTLPPFFAAVTGERH ENRYTVLARLNLEGSQSHPIRTALRDMARITGVPLALGMAQVIDGSGRRPGVHPPEAVIEPARFFADLAVALGCDSGVSP YLVEQQPLP
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43399; Mature: 43399
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILALGGAGAMGAAAVRAALDIPGVEEIVVADQDLGAAEALVRRLGEGPVPTRAMCVDV CEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEE TDAGALRTALEDVDLVLNTVGPYFRFGLTVLRMAIETRTHYLDICDDWEPTLQMLGLDEI CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCHHHH ARAHGVCAVIGMGASPGISNLLAATAAAELDEVDDVYTAWPVDVGGSGADTEEKSQLLGA HHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHCC DGRPTAAATHWMEQASGTITAVGAGRLVEKRPLSPVSLELPAGRRGTAYSIGHPEPITVQ CCCCHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCEEEECCCCCCCCEEECCCCCCEEEE RTLKPRGDALNLMVIKPWTVAYLDTLRRDMDAGRLSREEAAEAFAVPKFRRVLRSAYVAL EECCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHEEE RLRGPGTLPPFFAAVTGERHENRYTVLARLNLEGSQSHPIRTALRDMARITGVPLALGMA EECCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHH QVIDGSGRRPGVHPPEAVIEPARFFADLAVALGCDSGVSPYLVEQQPLP HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCC >Mature Secondary Structure MKILALGGAGAMGAAAVRAALDIPGVEEIVVADQDLGAAEALVRRLGEGPVPTRAMCVDV CEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEE TDAGALRTALEDVDLVLNTVGPYFRFGLTVLRMAIETRTHYLDICDDWEPTLQMLGLDEI CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCHHHH ARAHGVCAVIGMGASPGISNLLAATAAAELDEVDDVYTAWPVDVGGSGADTEEKSQLLGA HHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHCC DGRPTAAATHWMEQASGTITAVGAGRLVEKRPLSPVSLELPAGRRGTAYSIGHPEPITVQ CCCCHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCEEEECCCCCCCCEEECCCCCCEEEE RTLKPRGDALNLMVIKPWTVAYLDTLRRDMDAGRLSREEAAEAFAVPKFRRVLRSAYVAL EECCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHEEE RLRGPGTLPPFFAAVTGERHENRYTVLARLNLEGSQSHPIRTALRDMARITGVPLALGMA EECCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHH QVIDGSGRRPGVHPPEAVIEPARFFADLAVALGCDSGVSPYLVEQQPLP HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA