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The map label for this gene is asnC [C]

Identifier: 169627991

GI number: 169627991

Start: 884571

End: 885092

Strand: Reverse

Name: asnC [C]

Synonym: MAB_0892c

Alternate gene names: 169627991

Gene position: 885092-884571 (Counterclockwise)

Preceding gene: 169627993

Following gene: 169627990

Centisome position: 17.47

GC content: 64.18

Gene sequence:

>522_bases
ATGGCCGGTTCCGGTGAATTCGACAACCTCGATCAAGCGCTGATTACCGCGATGTACGCACATCCCCGGGCCGGTGCGCT
GGAGTTGTCACGGAACCTGCACGTCGCCCGGGCGACGGTCCAGGCGCGGCTGGAGAAACTCGAAGACTCCGGGGTAATCG
AGGGCTACGAGCCGCGAATCAATCTGGCGGCGGCGGGATTTGGAGTGCAAGCGTTCGTCACGCTCGAAATCGCGCAGGGA
GCGCTGAGCCGAGTGTCCGACGAGCTCGCGGCCATCCCCGGAGTGCTTGAGGCCTACGCGACCACGGGCGATGGAGACGT
GCTGTGCCGAGTGGCCGCAGAGTCCCATGACCGGCTGCAGCAGACATTGCTCGAACTGAACCAATCCGGGGTTGTCCAGC
GATCGACCAGCGTCATCGCCCTGTCGGTCGTCGTGCCGCCACGAGTGCTTCCGTTGTTGCAAAGCCGCGAGGTCGACCGA
CCCGCGACCAGAGCGCCTGCCTACCGAAAAACTCAGCAATAG

Upstream 100 bases:

>100_bases
GCTCTACAATCTGGCTATAGAATGTCTAGATATTTCCTATTTAACTATGCAAGTTGTACATCAACAGTCGAACACCGAAG
AGATTGCTGGAGAGTGATGC

Downstream 100 bases:

>100_bases
ACACCGGAAATTTGGTACATGACTAAACTAAATTGGCAGCAATCAGAGTCCGCTCCGTAGAAGGTGGGTAGGTGACCGAC
AACAGAACAGACGACCTCGA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MAGSGEFDNLDQALITAMYAHPRAGALELSRNLHVARATVQARLEKLEDSGVIEGYEPRINLAAAGFGVQAFVTLEIAQG
ALSRVSDELAAIPGVLEAYATTGDGDVLCRVAAESHDRLQQTLLELNQSGVVQRSTSVIALSVVVPPRVLPLLQSREVDR
PATRAPAYRKTQQ

Sequences:

>Translated_173_residues
MAGSGEFDNLDQALITAMYAHPRAGALELSRNLHVARATVQARLEKLEDSGVIEGYEPRINLAAAGFGVQAFVTLEIAQG
ALSRVSDELAAIPGVLEAYATTGDGDVLCRVAAESHDRLQQTLLELNQSGVVQRSTSVIALSVVVPPRVLPLLQSREVDR
PATRAPAYRKTQQ
>Mature_172_residues
AGSGEFDNLDQALITAMYAHPRAGALELSRNLHVARATVQARLEKLEDSGVIEGYEPRINLAAAGFGVQAFVTLEIAQGA
LSRVSDELAAIPGVLEAYATTGDGDVLCRVAAESHDRLQQTLLELNQSGVVQRSTSVIALSVVVPPRVLPLLQSREVDRP
ATRAPAYRKTQQ

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=138, Percent_Identity=28.9855072463768, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 18515; Mature: 18384

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSGEFDNLDQALITAMYAHPRAGALELSRNLHVARATVQARLEKLEDSGVIEGYEPRI
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE
NLAAAGFGVQAFVTLEIAQGALSRVSDELAAIPGVLEAYATTGDGDVLCRVAAESHDRLQ
EEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH
QTLLELNQSGVVQRSTSVIALSVVVPPRVLPLLQSREVDRPATRAPAYRKTQQ
HHHHHHCCCCCEEECCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGSGEFDNLDQALITAMYAHPRAGALELSRNLHVARATVQARLEKLEDSGVIEGYEPRI
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE
NLAAAGFGVQAFVTLEIAQGALSRVSDELAAIPGVLEAYATTGDGDVLCRVAAESHDRLQ
EEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH
QTLLELNQSGVVQRSTSVIALSVVVPPRVLPLLQSREVDRPATRAPAYRKTQQ
HHHHHHCCCCCEEECCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA