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The map label for this gene is lpqH [H]

Identifier: 169627984

GI number: 169627984

Start: 878921

End: 879397

Strand: Reverse

Name: lpqH [H]

Synonym: MAB_0885c

Alternate gene names: 169627984

Gene position: 879397-878921 (Counterclockwise)

Preceding gene: 169627985

Following gene: 169627983

Centisome position: 17.35

GC content: 63.31

Gene sequence:

>477_bases
ATGAAGCGTGGGCTTGTGGTCGCCATTGGCGGCGCGGCGATTGTCGCCGCAGGTCTGGTCGGCTGTTCGGGCGATAAGGA
CAAGTCCGAGACCAAGGGCACCACCGTGAGCAACAGCGCCGGCGCGGTAGCGACCAACAGCAGCGCCAAGGTCACCATCG
ACGGCAAGGAACAGAAGATCGAAGGCGCGGTCGTCTGCCAGTCCTCGAACGGCAATGTCAACATCGTCATCGGCAGCGGA
GCCCAAGGGTTCGGCGCCGTGGTGACAGAAGGCGATTCTCCGACCGTGAAGTCGGCGGGGCTCGGCAGCCTCAACGGACA
GTCGCTGGCGTTCTCCGAAGGCACCCCCGGTGCCAGCGCGAAGGCCACCAAGGACGGCAAAAAGTACCACATCGAAGGCA
CCGCCATCGCCGTGGACATGGCCAACCCGACGCAGCCTTCCAATAAGCCATTCGAAATCGAAGTCACCTGCCCATAG

Upstream 100 bases:

>100_bases
CTGGGTACGTAGGTATACCCGCGTTCTGCGGACCGCGGCCCGTTACCGCCCCATACTTTGTCCTGTTCGGCTCCACCCCA
TCACATATAAGGAGAACGCT

Downstream 100 bases:

>100_bases
CGGTAAGAAATCGCGATCTAGCCGGGCAGCACCGTCGTGTTGCCCGGCTAGTCTGTCTCGGGAGAACAAGGGGGGACACT
ATGAAACGAGTGTGGGCCGC

Product: lipoprotein lpqH precursor

Products: NA

Alternate protein names: 19 kDa lipoprotein antigen [H]

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKRGLVVAIGGAAIVAAGLVGCSGDKDKSETKGTTVSNSAGAVATNSSAKVTIDGKEQKIEGAVVCQSSNGNVNIVIGSG
AQGFGAVVTEGDSPTVKSAGLGSLNGQSLAFSEGTPGASAKATKDGKKYHIEGTAIAVDMANPTQPSNKPFEIEVTCP

Sequences:

>Translated_158_residues
MKRGLVVAIGGAAIVAAGLVGCSGDKDKSETKGTTVSNSAGAVATNSSAKVTIDGKEQKIEGAVVCQSSNGNVNIVIGSG
AQGFGAVVTEGDSPTVKSAGLGSLNGQSLAFSEGTPGASAKATKDGKKYHIEGTAIAVDMANPTQPSNKPFEIEVTCP
>Mature_158_residues
MKRGLVVAIGGAAIVAAGLVGCSGDKDKSETKGTTVSNSAGAVATNSSAKVTIDGKEQKIEGAVVCQSSNGNVNIVIGSG
AQGFGAVVTEGDSPTVKSAGLGSLNGQSLAFSEGTPGASAKATKDGKKYHIEGTAIAVDMANPTQPSNKPFEIEVTCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial 19 kDa antigen family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008691 [H]

Pfam domain/function: PF05481 Myco_19_kDa [H]

EC number: NA

Molecular weight: Translated: 15524; Mature: 15524

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGLVVAIGGAAIVAAGLVGCSGDKDKSETKGTTVSNSAGAVATNSSAKVTIDGKEQKI
CCCCEEEEECCHHEEEHHEEECCCCCCCCCCCCCEECCCCCEEEECCCCEEEECCCCCEE
EGAVVCQSSNGNVNIVIGSGAQGFGAVVTEGDSPTVKSAGLGSLNGQSLAFSEGTPGASA
EEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
KATKDGKKYHIEGTAIAVDMANPTQPSNKPFEIEVTCP
CCCCCCCEEEEECEEEEEECCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKRGLVVAIGGAAIVAAGLVGCSGDKDKSETKGTTVSNSAGAVATNSSAKVTIDGKEQKI
CCCCEEEEECCHHEEEHHEEECCCCCCCCCCCCCEECCCCCEEEECCCCEEEECCCCCEE
EGAVVCQSSNGNVNIVIGSGAQGFGAVVTEGDSPTVKSAGLGSLNGQSLAFSEGTPGASA
EEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
KATKDGKKYHIEGTAIAVDMANPTQPSNKPFEIEVTCP
CCCCCCCEEEEECEEEEEECCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2230723; 12788972 [H]