| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627961
Identifier: 169627961
GI number: 169627961
Start: 861051
End: 863288
Strand: Reverse
Name: 169627961
Synonym: MAB_0862c
Alternate gene names: NA
Gene position: 863288-861051 (Counterclockwise)
Preceding gene: 169627966
Following gene: 169627959
Centisome position: 17.04
GC content: 70.73
Gene sequence:
>2238_bases ATGAGTGACGATGCGGCGTTGGCTGGTTTGTCGGCGTGGTTACGCCGCTTGCCAGATGAACAGTTGGTACGACTAGTGCG GCTGCGGCCCGATTTGGCCTCGCCGCCGCCGGGTTCGCTGGCGGCGCTGGCGGGGCGTGCGCTGTCACGCCAGTCGGTGC GCGCGGCCACCGACAACCTGGACTTTTTGACGCTGGCGGTGCTGGATGCGCTGCTGGTGGCGCGTGCCGATGTCGCGGGC ATCCCGATCGCGAATGTACTCGCTCAGGTCGACGGGCGGGCCACGGAGCTGCAGGTACGCGCCACACTGGATCGGCTGCG CGAGCTGGCGCTGGTGTGGGAAGAGGGCGAGCTGCTGTATCTGGCGGGTGAGACCCGGTTCGGCCTCCCCTGGGTGGTCG GGCAAGTGATCAGCGAGCACACCCCCGATTCCTACGACGAAGCGCGCACGGCATTGGAGGGTGCCGACGAGCGCGGCATG GAACTGCTGCGGGCCCTCATCGCCGGATCTCCCATCGGCCGCACCCGCGACGCCGCTCCCGGCGCCCCACCGGACCGTCC GGTGCAGCGACTGCTGGCGGCCGGCCTGCTGCAGCGCATCGACGACGAGACCGTGTTGCTGCCCCGGTTCGTGGCGCAGC TGCTTCGCGGCGAGGAGCCCGACCGCCTGCAGCCACCGGCCGTCGAGACGACAACGGCTACCCAGTCCGAGGCCGACGCG GCCGCCGCCGGAGCGGCCCTTGACTTGCTGCGCGAGGTGGGCCTGCTGCTCGACGAACTCGGGGTCAACCCCGCGCCCCA GCTGCGCAGCGGTGGGCTGGGCGTGCGTGAGGTCAAGCGGCTGGCAAAGGCGACCGGCCTCGAGGACAACCGCATGGGTC TATTGCTGGAGGTACTGGCCGCAGCGGAGCTGATCGCCGTCGGCGACCCCGATGTCGACACCGATGCCGACGGCTGGCAC TGGGCGCCGACCACGCAGGCCGACCGATTCGCCGAGCTTCCGACCGCGACCCGCTGGTTCCGCTTGATGTCGGCGTGGTT GATGCTCGCGGCGCGCCCCGACCTGATCGGCAAGCGCACCAGCGATGACAAACCGATTGCGGCCCTTTCAGATTCACTGC GGTCCACGGCGGCGCCGCATGACCGCAAGCTGCTCCTGGAGATTCTGGGCGAGCTGGACCCCGGGCATGGACTGCGGGCC GAAGAGCTGTCCCGGGTGATGCGGTGGCGCCGCCCGCGCTGGGGCGCCCGGCTGGGCGTCGAACCCGTGACGGCGCTGCT GTTCGAGGCGACGACCCTGGGCGTGATCGGCCGCGGCGCGCTCACGACGCATGTGCGCACGTTCCTGGACAGCAGCGGCG ACGAAACGACGACCCTGGCCGCGATGGAAAAGGCGCTCCCCGCCCCCATCGACCACTTCCTGGTACAGGCCGACCTGACC GTCGTCGCACCCGGACCGCTCACGCGCGAGGTCGAGCTGGATCTGGCGGCCGTGGCAGATCTGGAATCGGCGGGGGCTGC CAGCGTCTTTAGGGTCAGCGAGGCCACCATCCGGCGCGCGCTGGATTCGGGGAAGACCGCCACCTCGCTGCACAGTTTCT TCGGATCGCACTCGAAAACCCCTGTCCCGCAGTCGCTGACGTATCTGATCGACGATGTGGCCCGGCGACACGGTCAGCTG CGGGCCGGGGTGGCGACGTCGTTCCTGCGCTGCGATGACGTCGCCCTGCTGGCACAGGTGATGGCCTCGGTACTGGCGGA GGACTTGGGGCTGCGGCTGCTGGCGCCCACTGTCGCGGTGTCGCTGGCCCCGCTGGCCGAGCTGGTGACCGGGCTGCGCT CGGCCGGTTTCGCCCCCGCCGCGGAGGACGCGACCGGGACGATCGTGGAGCTACGCGCGCACCGCGCGCGGGTGACCCCA CAACCGCACCGGATGGGGTGGACGCCGCCGGTGCTCAGTGAGCCCGCCGCCGCGGCCGTCGTGAAGGCATTGCGCGCGGC GGGCGACCACGACGGGGTACGCATCGAGCCGTCGCATGCGGTGGCGCTGCTACAGCAGTCCGCCAAGGCCCAGACCAGTG TGTTGATCGGGTACGTGGACCCGGCCGGGGTGGCCTCGTCGCGCGTGGTCAACCCGATCAGTGTGCGCGGTGGGCAGTTG TCGGCCTTCGACACCGCTGCCGGGCGCATCCGTGACTTCGCGATTCATCGCATCACCGCGGTCTCGCCGCCGGGCTGA
Upstream 100 bases:
>100_bases GCCAGCCGTTGTCGACATATTGCTCTTTGTCAGCCACGCAGCCATTGTGGCAGGCCGAGAGGCCGACGGCGAACCCAACC CGCCTCTACGCTGGTGATCG
Downstream 100 bases:
>100_bases GCCGGTTCGACGAATCCACCTAGTGCGTCAGCGGACACCTTCGAAGGGATTCCATGACTCGCTCTTGCGAACCCAGTGCA AGTAGTAGGCCTGGTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 745; Mature: 744
Protein sequence:
>745_residues MSDDAALAGLSAWLRRLPDEQLVRLVRLRPDLASPPPGSLAALAGRALSRQSVRAATDNLDFLTLAVLDALLVARADVAG IPIANVLAQVDGRATELQVRATLDRLRELALVWEEGELLYLAGETRFGLPWVVGQVISEHTPDSYDEARTALEGADERGM ELLRALIAGSPIGRTRDAAPGAPPDRPVQRLLAAGLLQRIDDETVLLPRFVAQLLRGEEPDRLQPPAVETTTATQSEADA AAAGAALDLLREVGLLLDELGVNPAPQLRSGGLGVREVKRLAKATGLEDNRMGLLLEVLAAAELIAVGDPDVDTDADGWH WAPTTQADRFAELPTATRWFRLMSAWLMLAARPDLIGKRTSDDKPIAALSDSLRSTAAPHDRKLLLEILGELDPGHGLRA EELSRVMRWRRPRWGARLGVEPVTALLFEATTLGVIGRGALTTHVRTFLDSSGDETTTLAAMEKALPAPIDHFLVQADLT VVAPGPLTREVELDLAAVADLESAGAASVFRVSEATIRRALDSGKTATSLHSFFGSHSKTPVPQSLTYLIDDVARRHGQL RAGVATSFLRCDDVALLAQVMASVLAEDLGLRLLAPTVAVSLAPLAELVTGLRSAGFAPAAEDATGTIVELRAHRARVTP QPHRMGWTPPVLSEPAAAAVVKALRAAGDHDGVRIEPSHAVALLQQSAKAQTSVLIGYVDPAGVASSRVVNPISVRGGQL SAFDTAAGRIRDFAIHRITAVSPPG
Sequences:
>Translated_745_residues MSDDAALAGLSAWLRRLPDEQLVRLVRLRPDLASPPPGSLAALAGRALSRQSVRAATDNLDFLTLAVLDALLVARADVAG IPIANVLAQVDGRATELQVRATLDRLRELALVWEEGELLYLAGETRFGLPWVVGQVISEHTPDSYDEARTALEGADERGM ELLRALIAGSPIGRTRDAAPGAPPDRPVQRLLAAGLLQRIDDETVLLPRFVAQLLRGEEPDRLQPPAVETTTATQSEADA AAAGAALDLLREVGLLLDELGVNPAPQLRSGGLGVREVKRLAKATGLEDNRMGLLLEVLAAAELIAVGDPDVDTDADGWH WAPTTQADRFAELPTATRWFRLMSAWLMLAARPDLIGKRTSDDKPIAALSDSLRSTAAPHDRKLLLEILGELDPGHGLRA EELSRVMRWRRPRWGARLGVEPVTALLFEATTLGVIGRGALTTHVRTFLDSSGDETTTLAAMEKALPAPIDHFLVQADLT VVAPGPLTREVELDLAAVADLESAGAASVFRVSEATIRRALDSGKTATSLHSFFGSHSKTPVPQSLTYLIDDVARRHGQL RAGVATSFLRCDDVALLAQVMASVLAEDLGLRLLAPTVAVSLAPLAELVTGLRSAGFAPAAEDATGTIVELRAHRARVTP QPHRMGWTPPVLSEPAAAAVVKALRAAGDHDGVRIEPSHAVALLQQSAKAQTSVLIGYVDPAGVASSRVVNPISVRGGQL SAFDTAAGRIRDFAIHRITAVSPPG >Mature_744_residues SDDAALAGLSAWLRRLPDEQLVRLVRLRPDLASPPPGSLAALAGRALSRQSVRAATDNLDFLTLAVLDALLVARADVAGI PIANVLAQVDGRATELQVRATLDRLRELALVWEEGELLYLAGETRFGLPWVVGQVISEHTPDSYDEARTALEGADERGME LLRALIAGSPIGRTRDAAPGAPPDRPVQRLLAAGLLQRIDDETVLLPRFVAQLLRGEEPDRLQPPAVETTTATQSEADAA AAGAALDLLREVGLLLDELGVNPAPQLRSGGLGVREVKRLAKATGLEDNRMGLLLEVLAAAELIAVGDPDVDTDADGWHW APTTQADRFAELPTATRWFRLMSAWLMLAARPDLIGKRTSDDKPIAALSDSLRSTAAPHDRKLLLEILGELDPGHGLRAE ELSRVMRWRRPRWGARLGVEPVTALLFEATTLGVIGRGALTTHVRTFLDSSGDETTTLAAMEKALPAPIDHFLVQADLTV VAPGPLTREVELDLAAVADLESAGAASVFRVSEATIRRALDSGKTATSLHSFFGSHSKTPVPQSLTYLIDDVARRHGQLR AGVATSFLRCDDVALLAQVMASVLAEDLGLRLLAPTVAVSLAPLAELVTGLRSAGFAPAAEDATGTIVELRAHRARVTPQ PHRMGWTPPVLSEPAAAAVVKALRAAGDHDGVRIEPSHAVALLQQSAKAQTSVLIGYVDPAGVASSRVVNPISVRGGQLS AFDTAAGRIRDFAIHRITAVSPPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79147; Mature: 79016
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDAALAGLSAWLRRLPDEQLVRLVRLRPDLASPPPGSLAALAGRALSRQSVRAATDNL CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC DFLTLAVLDALLVARADVAGIPIANVLAQVDGRATELQVRATLDRLRELALVWEEGELLY HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCEEE LAGETRFGLPWVVGQVISEHTPDSYDEARTALEGADERGMELLRALIAGSPIGRTRDAAP EECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC GAPPDRPVQRLLAAGLLQRIDDETVLLPRFVAQLLRGEEPDRLQPPAVETTTATQSEADA CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH AAAGAALDLLREVGLLLDELGVNPAPQLRSGGLGVREVKRLAKATGLEDNRMGLLLEVLA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH AAELIAVGDPDVDTDADGWHWAPTTQADRFAELPTATRWFRLMSAWLMLAARPDLIGKRT HHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC SDDKPIAALSDSLRSTAAPHDRKLLLEILGELDPGHGLRAEELSRVMRWRRPRWGARLGV CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH EPVTALLFEATTLGVIGRGALTTHVRTFLDSSGDETTTLAAMEKALPAPIDHFLVQADLT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCCEE VVAPGPLTREVELDLAAVADLESAGAASVFRVSEATIRRALDSGKTATSLHSFFGSHSKT EECCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC PVPQSLTYLIDDVARRHGQLRAGVATSFLRCDDVALLAQVMASVLAEDLGLRLLAPTVAV CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SLAPLAELVTGLRSAGFAPAAEDATGTIVELRAHRARVTPQPHRMGWTPPVLSEPAAAAV HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH VKALRAAGDHDGVRIEPSHAVALLQQSAKAQTSVLIGYVDPAGVASSRVVNPISVRGGQL HHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHCCCCCCCCCCCC SAFDTAAGRIRDFAIHRITAVSPPG CHHHHHHHHHHHHHHHHEEECCCCC >Mature Secondary Structure SDDAALAGLSAWLRRLPDEQLVRLVRLRPDLASPPPGSLAALAGRALSRQSVRAATDNL CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC DFLTLAVLDALLVARADVAGIPIANVLAQVDGRATELQVRATLDRLRELALVWEEGELLY HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCEEE LAGETRFGLPWVVGQVISEHTPDSYDEARTALEGADERGMELLRALIAGSPIGRTRDAAP EECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC GAPPDRPVQRLLAAGLLQRIDDETVLLPRFVAQLLRGEEPDRLQPPAVETTTATQSEADA CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH AAAGAALDLLREVGLLLDELGVNPAPQLRSGGLGVREVKRLAKATGLEDNRMGLLLEVLA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH AAELIAVGDPDVDTDADGWHWAPTTQADRFAELPTATRWFRLMSAWLMLAARPDLIGKRT HHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC SDDKPIAALSDSLRSTAAPHDRKLLLEILGELDPGHGLRAEELSRVMRWRRPRWGARLGV CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH EPVTALLFEATTLGVIGRGALTTHVRTFLDSSGDETTTLAAMEKALPAPIDHFLVQADLT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCCEE VVAPGPLTREVELDLAAVADLESAGAASVFRVSEATIRRALDSGKTATSLHSFFGSHSKT EECCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC PVPQSLTYLIDDVARRHGQLRAGVATSFLRCDDVALLAQVMASVLAEDLGLRLLAPTVAV CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SLAPLAELVTGLRSAGFAPAAEDATGTIVELRAHRARVTPQPHRMGWTPPVLSEPAAAAV HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH VKALRAAGDHDGVRIEPSHAVALLQQSAKAQTSVLIGYVDPAGVASSRVVNPISVRGGQL HHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHCCCCCCCCCCCC SAFDTAAGRIRDFAIHRITAVSPPG CHHHHHHHHHHHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA