| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627942
Identifier: 169627942
GI number: 169627942
Start: 837713
End: 838507
Strand: Direct
Name: 169627942
Synonym: MAB_0843
Alternate gene names: NA
Gene position: 837713-838507 (Clockwise)
Preceding gene: 169627941
Following gene: 169627943
Centisome position: 16.53
GC content: 63.4
Gene sequence:
>795_bases ATGGCCCAACAAAAAGTGACCGCGAAAACGATGTTGCGTTGTGCGCTGGGTTTCACGGTGGCGGCCACGGTGCTGGTGAC CGCGCCGGCTTGCGGGTCCGAGAAGCCCGCCGAGTCCGCCTTGAAGGGACTGCTGGCGCTGGAGCCGGGGAAGATCGAGG GCAACAAGCTCAGCGGCACCTGGTTCAAAATGGTGCAACCGGGCGGTAATCCCCAGGAGGGGCCATTCATGCCGAACGCC AATTCGCCTGTGCCCCAGGGATCGGCGACGCTGCTCTCGCCGGGCACCGACGGCGGGCTGATCCTGGGTGATTATCAGGG CGAGCCGGATCCCGCGTTCGACGAGGCCACGGGCTATTCGCTGGCATCGCGGGTGACTCAGCCCACGAAGTTCTTCAACA TCGAATTCGGCATATCCACCAACAAGATCGATCCGCAGACTCAGCGCGAACTGCTGGCGCCCACGGCCACCGTCTCGGGC GATTCGATCTCGGCGGACCTGTCGGCGTGGGCGGCATCGTGGAATCGGCAGGAGTTCAACCAGGGGGCGCCCAAACCGAA AGCCAAGGAGCAGGCCCAGATCCCCGGTGAGGCGCGCGCCAAACAGGTGTGGGAGTTCGTCGCCGGACGTTGGGTCGGCC ACGATTCCGTGGACGGCGAAAGTCCCAAGGCCACCGGGACCTATGACAAGGACACCAAAAAGTTCACCCTCGATTGGACC AGTCTGATCGTCGGTGGTCCGTTCAACAGTTTCACCGGGGTGTGGCATCTAGAAGGCGTGGTGAGGGATCGATGA
Upstream 100 bases:
>100_bases CCCCGCTGGGATTGCGGTCATTCAACTACTTCGGCTGGTTTTTCCTCGTGCCCGGTGTACTGGCGGCCGCGGTCGCCCTC GACTCGAAAGGCTTGCTTCG
Downstream 100 bases:
>100_bases GCGAAACTCCCGCCGAAGAGACGGCGCCGATCACCACCGCCAGCCCGAAGCGTGCCAAGGAACGTGTGTTTGGCATCGCG GTACGGGTATTCGCCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAQQKVTAKTMLRCALGFTVAATVLVTAPACGSEKPAESALKGLLALEPGKIEGNKLSGTWFKMVQPGGNPQEGPFMPNA NSPVPQGSATLLSPGTDGGLILGDYQGEPDPAFDEATGYSLASRVTQPTKFFNIEFGISTNKIDPQTQRELLAPTATVSG DSISADLSAWAASWNRQEFNQGAPKPKAKEQAQIPGEARAKQVWEFVAGRWVGHDSVDGESPKATGTYDKDTKKFTLDWT SLIVGGPFNSFTGVWHLEGVVRDR
Sequences:
>Translated_264_residues MAQQKVTAKTMLRCALGFTVAATVLVTAPACGSEKPAESALKGLLALEPGKIEGNKLSGTWFKMVQPGGNPQEGPFMPNA NSPVPQGSATLLSPGTDGGLILGDYQGEPDPAFDEATGYSLASRVTQPTKFFNIEFGISTNKIDPQTQRELLAPTATVSG DSISADLSAWAASWNRQEFNQGAPKPKAKEQAQIPGEARAKQVWEFVAGRWVGHDSVDGESPKATGTYDKDTKKFTLDWT SLIVGGPFNSFTGVWHLEGVVRDR >Mature_263_residues AQQKVTAKTMLRCALGFTVAATVLVTAPACGSEKPAESALKGLLALEPGKIEGNKLSGTWFKMVQPGGNPQEGPFMPNAN SPVPQGSATLLSPGTDGGLILGDYQGEPDPAFDEATGYSLASRVTQPTKFFNIEFGISTNKIDPQTQRELLAPTATVSGD SISADLSAWAASWNRQEFNQGAPKPKAKEQAQIPGEARAKQVWEFVAGRWVGHDSVDGESPKATGTYDKDTKKFTLDWTS LIVGGPFNSFTGVWHLEGVVRDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28127; Mature: 27996
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQKVTAKTMLRCALGFTVAATVLVTAPACGSEKPAESALKGLLALEPGKIEGNKLSGT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCE WFKMVQPGGNPQEGPFMPNANSPVPQGSATLLSPGTDGGLILGDYQGEPDPAFDEATGYS EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCHH LASRVTQPTKFFNIEFGISTNKIDPQTQRELLAPTATVSGDSISADLSAWAASWNRQEFN HHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHCCHHHHH QGAPKPKAKEQAQIPGEARAKQVWEFVAGRWVGHDSVDGESPKATGTYDKDTKKFTLDWT CCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHE SLIVGGPFNSFTGVWHLEGVVRDR EEEECCCCCCCCCEEEECEEECCC >Mature Secondary Structure AQQKVTAKTMLRCALGFTVAATVLVTAPACGSEKPAESALKGLLALEPGKIEGNKLSGT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCE WFKMVQPGGNPQEGPFMPNANSPVPQGSATLLSPGTDGGLILGDYQGEPDPAFDEATGYS EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCHH LASRVTQPTKFFNIEFGISTNKIDPQTQRELLAPTATVSGDSISADLSAWAASWNRQEFN HHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHCCHHHHH QGAPKPKAKEQAQIPGEARAKQVWEFVAGRWVGHDSVDGESPKATGTYDKDTKKFTLDWT CCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHE SLIVGGPFNSFTGVWHLEGVVRDR EEEECCCCCCCCCEEEECEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA