| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627939
Identifier: 169627939
GI number: 169627939
Start: 834841
End: 835296
Strand: Reverse
Name: 169627939
Synonym: MAB_0840c
Alternate gene names: NA
Gene position: 835296-834841 (Counterclockwise)
Preceding gene: 169627946
Following gene: 169627938
Centisome position: 16.48
GC content: 64.91
Gene sequence:
>456_bases GTGACCGACCAAACCGCCGAATCTCTCCGGGCTCCTTACACGATCGAATTCGGGTTCGAACGGACTGTTGGCCCCAAAAT CGGCGCCTTCCTCGACGGTCTGCGCGCTGCCCGGCTGTTCGGAGTGCGAACCGCCGGCGGCCACGTGCTGTGTCCGGTGC TCGAATTCGATCCGGCCGATGGCAGTGCCACCGGCGCGCTGGTCGAGCTGGAACCGAAGGGGGTTGTCCTGCAATGGACA TGGGTGCCGCCACGGCCCGCGGACGAGTTGGAGACGAGCTTCGCCTGGGCGCTCATCCGCATTAAGGGAACCACCAACTC GATGTTCCACGCTGTCGATGTCGGCGGCAATCCCGCGGCCATGAAGTCCGGGTTGGCGGTCACGCCGCGCTGGCGCACAG ACCGCGTCGGTGCGATTACCGACATCATCTGCTTCCAGCCCATCGGTGAACAGTGA
Upstream 100 bases:
>100_bases ACGTGCGTAGCCGGATGTAGACCTGTGGCCCCGATCACTCGCGTGCTACGGTCCTATCGCTTGATTCAATCAGTCGATAG AAACCTTCTCTGGGAGGGCT
Downstream 100 bases:
>100_bases CCGCGGTGCCCGAACCCGTCTCTTCGATCACCAGTCCATTTCACATGGACTACACGTATGTCGCGGGTACCGGCCGCTCG GTCTTCCTGCGTGGATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTDQTAESLRAPYTIEFGFERTVGPKIGAFLDGLRAARLFGVRTAGGHVLCPVLEFDPADGSATGALVELEPKGVVLQWT WVPPRPADELETSFAWALIRIKGTTNSMFHAVDVGGNPAAMKSGLAVTPRWRTDRVGAITDIICFQPIGEQ
Sequences:
>Translated_151_residues MTDQTAESLRAPYTIEFGFERTVGPKIGAFLDGLRAARLFGVRTAGGHVLCPVLEFDPADGSATGALVELEPKGVVLQWT WVPPRPADELETSFAWALIRIKGTTNSMFHAVDVGGNPAAMKSGLAVTPRWRTDRVGAITDIICFQPIGEQ >Mature_150_residues TDQTAESLRAPYTIEFGFERTVGPKIGAFLDGLRAARLFGVRTAGGHVLCPVLEFDPADGSATGALVELEPKGVVLQWTW VPPRPADELETSFAWALIRIKGTTNSMFHAVDVGGNPAAMKSGLAVTPRWRTDRVGAITDIICFQPIGEQ
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16268; Mature: 16137
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQTAESLRAPYTIEFGFERTVGPKIGAFLDGLRAARLFGVRTAGGHVLCPVLEFDPAD CCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEEEEECCCC GSATGALVELEPKGVVLQWTWVPPRPADELETSFAWALIRIKGTTNSMFHAVDVGGNPAA CCCCEEEEEECCCCEEEEEEECCCCCHHHHHCCEEEEEEEEECCCCCEEEEEECCCCHHH MKSGLAVTPRWRTDRVGAITDIICFQPIGEQ HCCCCEECCCCCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure TDQTAESLRAPYTIEFGFERTVGPKIGAFLDGLRAARLFGVRTAGGHVLCPVLEFDPAD CCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEEEEECCCC GSATGALVELEPKGVVLQWTWVPPRPADELETSFAWALIRIKGTTNSMFHAVDVGGNPAA CCCCEEEEEECCCCEEEEEEECCCCCHHHHHCCEEEEEEEEECCCCCEEEEEECCCCHHH MKSGLAVTPRWRTDRVGAITDIICFQPIGEQ HCCCCEECCCCCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA