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The map label for this gene is allR [C]

Identifier: 169627913

GI number: 169627913

Start: 804402

End: 805193

Strand: Reverse

Name: allR [C]

Synonym: MAB_0813c

Alternate gene names: 169627913

Gene position: 805193-804402 (Counterclockwise)

Preceding gene: 169627919

Following gene: 169627910

Centisome position: 15.89

GC content: 64.77

Gene sequence:

>792_bases
GTGGCCACGACCGTCGACAAGGGGTTGTTGCTGTTGCAGGCGCTGGCCGCCGAGGAATCACGTACGGGCGCGCCGGTGAC
CAACACGTGGCTGGCCGACCAGTTGAACCTTGACCAGGCGCAGGTATCACGAATGCTCAGCGCGCTGGCGGCGGCCGGAT
TGGCAGAACGAGAGCCCGAGTCACGGGGATATCGCGTGGGCTCCAGGTACTTCGATATCGGTGCTGCCGCCATGCGTGTC
GAGGTGCTCGCGAAAGTCCGCCCCGTGGTTCGGGGGCTGCTGCACGCCTGGCATGAACCCGCGTGGCTCTCGGTGCTGTC
TCGCGGGCAGGTGCTCACTGTCCAGGCTGAGCCCAGCCAATGGTTCCCGTACTTTCCGGTACGAGTCGGCGCGATGACGC
CGGCCTGGTGCAGCGGGCCCGGCCGCGCGCTCACCCAAGACCTTTCTCGCGAAGAGCTGACGACCTTGTTTCAGGACGAA
ACGTTCGTCGGCGGCGGACCTGGAGCGGTGCGTGACCCACTAGAACTTTTCGAACGAAACCTTCAGTCCGCCAAGATGAT
TGCGGTAGTCGCCGATAGCGAATTCGAGCACGATGTTGTCGAGTTCTCGGCCCCGGCACAATGCGATCAGCTGGATATGA
CGGTGGCCGTAAGCGTTGCCGTTCCCAAACACCGAATCTCCGGCCGGACGACGGCCATCGCCACCTCGGTGGCCGAAGCT
GCGCAGGGTGTCACCGCATTACTGCGGGCCGCCAGCCCAATCGCTCCGAAAGCTGGCCGGCCAGCTCCCTGA

Upstream 100 bases:

>100_bases
TCCTCCGTGTGCCGTAGATCACCTGCGCGGCCCAGTGTGGTGGGTGACGTTCATAATTGTCAAGCATTGTTGTTTATTAC
GAACGCGCTATTCTTTTGCT

Downstream 100 bases:

>100_bases
TAGTGGGGCCCAGTTCCCGGGCACGTGGCGCGAGGGTGTGCGTTGGCCCCTGGATATGCAGAGCGCACCGCACCGTCCCG
GTGAAATCCCTTACCGGAGC

Product: putative transcriptional regulator, IclR

Products: NA

Alternate protein names: Transcriptional Regulator IclR Family; Regulatory Proteins IclR; Transcriptional Regulator IclR; Regulatory Protein IclR

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MATTVDKGLLLLQALAAEESRTGAPVTNTWLADQLNLDQAQVSRMLSALAAAGLAEREPESRGYRVGSRYFDIGAAAMRV
EVLAKVRPVVRGLLHAWHEPAWLSVLSRGQVLTVQAEPSQWFPYFPVRVGAMTPAWCSGPGRALTQDLSREELTTLFQDE
TFVGGGPGAVRDPLELFERNLQSAKMIAVVADSEFEHDVVEFSAPAQCDQLDMTVAVSVAVPKHRISGRTTAIATSVAEA
AQGVTALLRAASPIAPKAGRPAP

Sequences:

>Translated_263_residues
MATTVDKGLLLLQALAAEESRTGAPVTNTWLADQLNLDQAQVSRMLSALAAAGLAEREPESRGYRVGSRYFDIGAAAMRV
EVLAKVRPVVRGLLHAWHEPAWLSVLSRGQVLTVQAEPSQWFPYFPVRVGAMTPAWCSGPGRALTQDLSREELTTLFQDE
TFVGGGPGAVRDPLELFERNLQSAKMIAVVADSEFEHDVVEFSAPAQCDQLDMTVAVSVAVPKHRISGRTTAIATSVAEA
AQGVTALLRAASPIAPKAGRPAP
>Mature_262_residues
ATTVDKGLLLLQALAAEESRTGAPVTNTWLADQLNLDQAQVSRMLSALAAAGLAEREPESRGYRVGSRYFDIGAAAMRVE
VLAKVRPVVRGLLHAWHEPAWLSVLSRGQVLTVQAEPSQWFPYFPVRVGAMTPAWCSGPGRALTQDLSREELTTLFQDET
FVGGGPGAVRDPLELFERNLQSAKMIAVVADSEFEHDVVEFSAPAQCDQLDMTVAVSVAVPKHRISGRTTAIATSVAEAA
QGVTALLRAASPIAPKAGRPAP

Specific function: Negative Regulator Of Allantoin And Glyoxylate Utilization Operons. [C]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28124; Mature: 27993

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTVDKGLLLLQALAAEESRTGAPVTNTWLADQLNLDQAQVSRMLSALAAAGLAEREPE
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
SRGYRVGSRYFDIGAAAMRVEVLAKVRPVVRGLLHAWHEPAWLSVLSRGQVLTVQAEPSQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCC
WFPYFPVRVGAMTPAWCSGPGRALTQDLSREELTTLFQDETFVGGGPGAVRDPLELFERN
CCCCCCEEECCCCCHHCCCCCHHHHHHCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHH
LQSAKMIAVVADSEFEHDVVEFSAPAQCDQLDMTVAVSVAVPKHRISGRTTAIATSVAEA
HHHCEEEEEEECCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCHHCCCCHHHHHHHHHHH
AQGVTALLRAASPIAPKAGRPAP
HHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ATTVDKGLLLLQALAAEESRTGAPVTNTWLADQLNLDQAQVSRMLSALAAAGLAEREPE
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
SRGYRVGSRYFDIGAAAMRVEVLAKVRPVVRGLLHAWHEPAWLSVLSRGQVLTVQAEPSQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCC
WFPYFPVRVGAMTPAWCSGPGRALTQDLSREELTTLFQDETFVGGGPGAVRDPLELFERN
CCCCCCEEECCCCCHHCCCCCHHHHHHCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHH
LQSAKMIAVVADSEFEHDVVEFSAPAQCDQLDMTVAVSVAVPKHRISGRTTAIATSVAEA
HHHCEEEEEEECCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCHHCCCCHHHHHHHHHHH
AQGVTALLRAASPIAPKAGRPAP
HHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA