| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627888
Identifier: 169627888
GI number: 169627888
Start: 781977
End: 782801
Strand: Direct
Name: 169627888
Synonym: MAB_0788
Alternate gene names: NA
Gene position: 781977-782801 (Clockwise)
Preceding gene: 169627887
Following gene: 169627889
Centisome position: 15.43
GC content: 68.73
Gene sequence:
>825_bases GTGACGATGAGCCGAGTAGATGAGATCGCAGTGCAGCCCTGGCCGGGCAATCCGGCCACGGCGTGGGCCGCCGTGGAAGA GCGCGCGCGGACGCACCGTCTCTCCGACCGGCCTGAGGCGATCCCCCGTATGGACGATCTCGGCACCCGGCTGCAGAAGA TGAGCGGTCTGATGAACCAGGTTGCCGGGGTCGGGCTGCTCATCGTCACGGCGATAAGCGTGATGATGCTGCTTCGGTCG CTCTCGGGCGAGCCGGAGGACTGGCTCGTCGTCGGAATGGCGGCGTTGGTAGCCGCAGTGATGGTGCCGCTCGGTGTCTT CTTGCTGCTGTACCCGCGCCGGTCTTGGGGGCCGACCGCGTGGGTCGTGGATTCCGCGATGCTGTGCGAGGCGCACCCGT ACCGGCTGCGGCTGCGCAAGCACCCGTCGAGCGCCGCCGTCGCGACGATCCTGCTCGGCGGCGGAGGCATCGAAGGCGAG ACCGTTCGGATGGACGGCGAGAAAGCGATGCGCATCGTCAGCGCCTGCGAACAGTGGGCGACCCAGCTCGAGCAGGATCC GTCGGCCTATGCCGAGTTCTGGCGGCGATGGAAGCGGGAGGACCCGGAGGTGCTCCCCACCGAGCTGCTCTTCGGCCCGG ACGCGAAGGGCGGCTTCATCACCTGCGTGGACCGCCACCACCGCTGGTTCCTCGCGATCCCCCGCCGCCGTAAGGCTCGG CTGGGCAACCCCTGGCACCATGCGCACGCCCTGCCCGTGTGGTGGACCACCGAGCACGCCGACTCGATCGGCATCGACTG GGACTCGATGAGGAGCGGATCATGA
Upstream 100 bases:
>100_bases GGATCGGGCGCAGGATCCGCATCCTGCACAACACGGTCGACCCCGACGATCTGTACGACGTGCGCTTCGATGGCTGGCCG GACCGCGAGACGAAGGGGTG
Downstream 100 bases:
>100_bases GCAATCATTCACCCGGCCAACGGTCAGCTCGGTCTGTGCTCAGACGGATCGGGAAGGGCATCGCCAGCGAGTTCACCCCT CCGCCGAAGCCGCGCCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTMSRVDEIAVQPWPGNPATAWAAVEERARTHRLSDRPEAIPRMDDLGTRLQKMSGLMNQVAGVGLLIVTAISVMMLLRS LSGEPEDWLVVGMAALVAAVMVPLGVFLLLYPRRSWGPTAWVVDSAMLCEAHPYRLRLRKHPSSAAVATILLGGGGIEGE TVRMDGEKAMRIVSACEQWATQLEQDPSAYAEFWRRWKREDPEVLPTELLFGPDAKGGFITCVDRHHRWFLAIPRRRKAR LGNPWHHAHALPVWWTTEHADSIGIDWDSMRSGS
Sequences:
>Translated_274_residues MTMSRVDEIAVQPWPGNPATAWAAVEERARTHRLSDRPEAIPRMDDLGTRLQKMSGLMNQVAGVGLLIVTAISVMMLLRS LSGEPEDWLVVGMAALVAAVMVPLGVFLLLYPRRSWGPTAWVVDSAMLCEAHPYRLRLRKHPSSAAVATILLGGGGIEGE TVRMDGEKAMRIVSACEQWATQLEQDPSAYAEFWRRWKREDPEVLPTELLFGPDAKGGFITCVDRHHRWFLAIPRRRKAR LGNPWHHAHALPVWWTTEHADSIGIDWDSMRSGS >Mature_273_residues TMSRVDEIAVQPWPGNPATAWAAVEERARTHRLSDRPEAIPRMDDLGTRLQKMSGLMNQVAGVGLLIVTAISVMMLLRSL SGEPEDWLVVGMAALVAAVMVPLGVFLLLYPRRSWGPTAWVVDSAMLCEAHPYRLRLRKHPSSAAVATILLGGGGIEGET VRMDGEKAMRIVSACEQWATQLEQDPSAYAEFWRRWKREDPEVLPTELLFGPDAKGGFITCVDRHHRWFLAIPRRRKARL GNPWHHAHALPVWWTTEHADSIGIDWDSMRSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30673; Mature: 30542
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSRVDEIAVQPWPGNPATAWAAVEERARTHRLSDRPEAIPRMDDLGTRLQKMSGLMNQ CCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHH VAGVGLLIVTAISVMMLLRSLSGEPEDWLVVGMAALVAAVMVPLGVFLLLYPRRSWGPTA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH WVVDSAMLCEAHPYRLRLRKHPSSAAVATILLGGGGIEGETVRMDGEKAMRIVSACEQWA HHHHHHHHHCCCCCEEEEECCCCHHHEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHH TQLEQDPSAYAEFWRRWKREDPEVLPTELLFGPDAKGGFITCVDRHHRWFLAIPRRRKAR HHHCCCHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCEEEEEECCCEEEEECCCHHHHC LGNPWHHAHALPVWWTTEHADSIGIDWDSMRSGS CCCCCHHCCCCEEEEECCCCCCCCCCHHHCCCCC >Mature Secondary Structure TMSRVDEIAVQPWPGNPATAWAAVEERARTHRLSDRPEAIPRMDDLGTRLQKMSGLMNQ CHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHH VAGVGLLIVTAISVMMLLRSLSGEPEDWLVVGMAALVAAVMVPLGVFLLLYPRRSWGPTA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH WVVDSAMLCEAHPYRLRLRKHPSSAAVATILLGGGGIEGETVRMDGEKAMRIVSACEQWA HHHHHHHHHCCCCCEEEEECCCCHHHEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHH TQLEQDPSAYAEFWRRWKREDPEVLPTELLFGPDAKGGFITCVDRHHRWFLAIPRRRKAR HHHCCCHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCEEEEEECCCEEEEECCCHHHHC LGNPWHHAHALPVWWTTEHADSIGIDWDSMRSGS CCCCCHHCCCCEEEEECCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA