| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627882
Identifier: 169627882
GI number: 169627882
Start: 776477
End: 777121
Strand: Direct
Name: 169627882
Synonym: MAB_0781
Alternate gene names: NA
Gene position: 776477-777121 (Clockwise)
Preceding gene: 169627881
Following gene: 169627883
Centisome position: 15.32
GC content: 55.66
Gene sequence:
>645_bases ATGACTTCGATTTCGAATGAAACCGAAGATGAAAGGGCAGCCAAGGCTGGCATACGGATGCTTACAGGAATTGGCGGGTT AATCCTGCTGTTTGCCTTGGCGAATCTGGACTACGTTCCGCGCATCATTCGTTTCAAACAAGTCCACCCTGATCTGTTCT GGTGGACTGCGGCGATAACCGGCATAAACGCGGCGATCATCCTGCTCGCGGCTGTCGTTCTATGGAACTGCCCGCCTCGA CCACTGATACCCGACAATCGACTTACGGTGCGGGTGAAGCAGATTGCGAAATTCTTGGTCGGCGCCACGACCTTCGGACT CGCTGCCTTCTGGGGAGCCCTAGCTGGCGCCATGATGCCTTCGCCTGAGAAGGGCGTCACGCACGATGAGATGAATCATC TTCTAGGCCAGATCGTGGGTGAGCCATTGAAGTTCATGACCATGCTGGCGTTAGTGGGAATGGTCCTAGCACTTTGTTTG GATCTCTACGTGGTGGGTCGAGAACGTCGAAAATCTATATTTAGAGGGCTACGCCCCGTGCTGGCGTGGCTTTGCACGCA ACTGACATCACCGCGGGTGATCGGCACCGTGTCTTATCTGTCGCTGGCGATGATCACCTGGTGCGGCACGCTCCCACGCA CCTAG
Upstream 100 bases:
>100_bases GGGAACTTGTCGCGTGGTGGGCGTGCCATGTTCTGGTTCTACGCCGAGGGTCTGACACATTTGCTACGTTCACGTGATGG TTGAAGTTAGGGGTGCGGAA
Downstream 100 bases:
>100_bases TCGGCTTCAATGCCAATTCTGAATTTCCCCTAAATATGCATACGGCCTGACGGCGCCAGTGTAAGTATCACGGCAAATAT GGTTCGTGGGGGATCTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTSISNETEDERAAKAGIRMLTGIGGLILLFALANLDYVPRIIRFKQVHPDLFWWTAAITGINAAIILLAAVVLWNCPPR PLIPDNRLTVRVKQIAKFLVGATTFGLAAFWGALAGAMMPSPEKGVTHDEMNHLLGQIVGEPLKFMTMLALVGMVLALCL DLYVVGRERRKSIFRGLRPVLAWLCTQLTSPRVIGTVSYLSLAMITWCGTLPRT
Sequences:
>Translated_214_residues MTSISNETEDERAAKAGIRMLTGIGGLILLFALANLDYVPRIIRFKQVHPDLFWWTAAITGINAAIILLAAVVLWNCPPR PLIPDNRLTVRVKQIAKFLVGATTFGLAAFWGALAGAMMPSPEKGVTHDEMNHLLGQIVGEPLKFMTMLALVGMVLALCL DLYVVGRERRKSIFRGLRPVLAWLCTQLTSPRVIGTVSYLSLAMITWCGTLPRT >Mature_213_residues TSISNETEDERAAKAGIRMLTGIGGLILLFALANLDYVPRIIRFKQVHPDLFWWTAAITGINAAIILLAAVVLWNCPPRP LIPDNRLTVRVKQIAKFLVGATTFGLAAFWGALAGAMMPSPEKGVTHDEMNHLLGQIVGEPLKFMTMLALVGMVLALCLD LYVVGRERRKSIFRGLRPVLAWLCTQLTSPRVIGTVSYLSLAMITWCGTLPRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23514; Mature: 23382
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSISNETEDERAAKAGIRMLTGIGGLILLFALANLDYVPRIIRFKQVHPDLFWWTAAIT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHH GINAAIILLAAVVLWNCPPRPLIPDNRLTVRVKQIAKFLVGATTFGLAAFWGALAGAMMP HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPEKGVTHDEMNHLLGQIVGEPLKFMTMLALVGMVLALCLDLYVVGRERRKSIFRGLRPV CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAWLCTQLTSPRVIGTVSYLSLAMITWCGTLPRT HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSISNETEDERAAKAGIRMLTGIGGLILLFALANLDYVPRIIRFKQVHPDLFWWTAAIT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHH GINAAIILLAAVVLWNCPPRPLIPDNRLTVRVKQIAKFLVGATTFGLAAFWGALAGAMMP HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPEKGVTHDEMNHLLGQIVGEPLKFMTMLALVGMVLALCLDLYVVGRERRKSIFRGLRPV CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAWLCTQLTSPRVIGTVSYLSLAMITWCGTLPRT HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA