| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is ybaK [C]
Identifier: 169627871
GI number: 169627871
Start: 768514
End: 768990
Strand: Direct
Name: ybaK [C]
Synonym: MAB_0770
Alternate gene names: 169627871
Gene position: 768514-768990 (Clockwise)
Preceding gene: 169627869
Following gene: 169627874
Centisome position: 15.17
GC content: 63.52
Gene sequence:
>477_bases ATGACCGAAGTATTGCCCGAAACCAGCCGACAATTGCAGGCCACCCTTGCCGGTTTGGGATGTCGGGGACGCATCCGTCA GCTGCCCGATTCCACGCATTCGGCGAACGATGCGTCGGCGGCAATCGGTTGTGCGATCGATGCCATCGCCAGCAGTCTGC TGTTTATGGCGGACGATTCACCGCTGCTGGTGATGGCCAGCGGCGCACATCGCGTTGACACTGACCGCGTTGCCCAGCTG GTCGGTGCGCTCAAGGTGCGGTTGGCGCCCGCCAAGGCCGTCGCGAAGATTACCGGCCAGGTAGTGGGAGGTGTTGCACC GGTTGGTCATCCGAACCCGATCCGGACCTTGGTGGACAGCACGCTGGAAAAGTGGGATGAGATCTGGGCGGCCGGTGGCA CGCCGCGCACTGTCTTTCCGCTCACCTTCGCCGAGCTTGTCCGGATCACCGGCGGACAGGTGTGCGAGGTCGCTTAG
Upstream 100 bases:
>100_bases TCGGCGTAGCCGGGCGCCGACCTCTGCAGGGGCCGATTGGTCGTTGTCCACGGGACCACTCTAGAGTTCTGTTTACAGAA CCCTAGAGGAAGGCTCCCTG
Downstream 100 bases:
>100_bases CGATCAGCCCGGCAGATCCTCGGTAAGCGCCTCGTCGGCAAGGTCTTCCAGCTCTTTACCCTTGGTTTCCGGTCCAAGCA GGTATCCGATGATCGTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: YbaK/EbsC Protein; YbaK/Prolyl-TRNA Synthetase Associated Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein; Ybak/Prolyl-TRNA Synthetase Associated Region; YbaK/EbsC Family Protein; YbaK/Prolyl-TRNA Synthetase Like Protein; YbaK/Prolyl-TRNA Synthetase-Associated Domain Protein; YbaK-Like Protein; Misacylated TRNA(Pro) Deacylase; YbaK / Prolyl-TRNA Synthetases Associated Domain; YbaK/Prolyl-TRNA Synthetase Domain Protein; YbaK Protein; YbaK/Prolyl-TRNA Synthetase Associated Domain-Containing; Prolyl-TRNA Synthetase Like Protein YbaK
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTEVLPETSRQLQATLAGLGCRGRIRQLPDSTHSANDASAAIGCAIDAIASSLLFMADDSPLLVMASGAHRVDTDRVAQL VGALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIRTLVDSTLEKWDEIWAAGGTPRTVFPLTFAELVRITGGQVCEVA
Sequences:
>Translated_158_residues MTEVLPETSRQLQATLAGLGCRGRIRQLPDSTHSANDASAAIGCAIDAIASSLLFMADDSPLLVMASGAHRVDTDRVAQL VGALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIRTLVDSTLEKWDEIWAAGGTPRTVFPLTFAELVRITGGQVCEVA >Mature_157_residues TEVLPETSRQLQATLAGLGCRGRIRQLPDSTHSANDASAAIGCAIDAIASSLLFMADDSPLLVMASGAHRVDTDRVAQLV GALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIRTLVDSTLEKWDEIWAAGGTPRTVFPLTFAELVRITGGQVCEVA
Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16435; Mature: 16304
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVLPETSRQLQATLAGLGCRGRIRQLPDSTHSANDASAAIGCAIDAIASSLLFMADDS CCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCC PLLVMASGAHRVDTDRVAQLVGALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIRTLVDS CEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH TLEKWDEIWAAGGTPRTVFPLTFAELVRITGGQVCEVA HHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCEECCC >Mature Secondary Structure TEVLPETSRQLQATLAGLGCRGRIRQLPDSTHSANDASAAIGCAIDAIASSLLFMADDS CCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCC PLLVMASGAHRVDTDRVAQLVGALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIRTLVDS CEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH TLEKWDEIWAAGGTPRTVFPLTFAELVRITGGQVCEVA HHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA