Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is ybaK [C]

Identifier: 169627871

GI number: 169627871

Start: 768514

End: 768990

Strand: Direct

Name: ybaK [C]

Synonym: MAB_0770

Alternate gene names: 169627871

Gene position: 768514-768990 (Clockwise)

Preceding gene: 169627869

Following gene: 169627874

Centisome position: 15.17

GC content: 63.52

Gene sequence:

>477_bases
ATGACCGAAGTATTGCCCGAAACCAGCCGACAATTGCAGGCCACCCTTGCCGGTTTGGGATGTCGGGGACGCATCCGTCA
GCTGCCCGATTCCACGCATTCGGCGAACGATGCGTCGGCGGCAATCGGTTGTGCGATCGATGCCATCGCCAGCAGTCTGC
TGTTTATGGCGGACGATTCACCGCTGCTGGTGATGGCCAGCGGCGCACATCGCGTTGACACTGACCGCGTTGCCCAGCTG
GTCGGTGCGCTCAAGGTGCGGTTGGCGCCCGCCAAGGCCGTCGCGAAGATTACCGGCCAGGTAGTGGGAGGTGTTGCACC
GGTTGGTCATCCGAACCCGATCCGGACCTTGGTGGACAGCACGCTGGAAAAGTGGGATGAGATCTGGGCGGCCGGTGGCA
CGCCGCGCACTGTCTTTCCGCTCACCTTCGCCGAGCTTGTCCGGATCACCGGCGGACAGGTGTGCGAGGTCGCTTAG

Upstream 100 bases:

>100_bases
TCGGCGTAGCCGGGCGCCGACCTCTGCAGGGGCCGATTGGTCGTTGTCCACGGGACCACTCTAGAGTTCTGTTTACAGAA
CCCTAGAGGAAGGCTCCCTG

Downstream 100 bases:

>100_bases
CGATCAGCCCGGCAGATCCTCGGTAAGCGCCTCGTCGGCAAGGTCTTCCAGCTCTTTACCCTTGGTTTCCGGTCCAAGCA
GGTATCCGATGATCGTCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: YbaK/EbsC Protein; YbaK/Prolyl-TRNA Synthetase Associated Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein; Ybak/Prolyl-TRNA Synthetase Associated Region; YbaK/EbsC Family Protein; YbaK/Prolyl-TRNA Synthetase Like Protein; YbaK/Prolyl-TRNA Synthetase-Associated Domain Protein; YbaK-Like Protein; Misacylated TRNA(Pro) Deacylase; YbaK / Prolyl-TRNA Synthetases Associated Domain; YbaK/Prolyl-TRNA Synthetase Domain Protein; YbaK Protein; YbaK/Prolyl-TRNA Synthetase Associated Domain-Containing; Prolyl-TRNA Synthetase Like Protein YbaK

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTEVLPETSRQLQATLAGLGCRGRIRQLPDSTHSANDASAAIGCAIDAIASSLLFMADDSPLLVMASGAHRVDTDRVAQL
VGALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIRTLVDSTLEKWDEIWAAGGTPRTVFPLTFAELVRITGGQVCEVA

Sequences:

>Translated_158_residues
MTEVLPETSRQLQATLAGLGCRGRIRQLPDSTHSANDASAAIGCAIDAIASSLLFMADDSPLLVMASGAHRVDTDRVAQL
VGALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIRTLVDSTLEKWDEIWAAGGTPRTVFPLTFAELVRITGGQVCEVA
>Mature_157_residues
TEVLPETSRQLQATLAGLGCRGRIRQLPDSTHSANDASAAIGCAIDAIASSLLFMADDSPLLVMASGAHRVDTDRVAQLV
GALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIRTLVDSTLEKWDEIWAAGGTPRTVFPLTFAELVRITGGQVCEVA

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16435; Mature: 16304

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVLPETSRQLQATLAGLGCRGRIRQLPDSTHSANDASAAIGCAIDAIASSLLFMADDS
CCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCC
PLLVMASGAHRVDTDRVAQLVGALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIRTLVDS
CEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
TLEKWDEIWAAGGTPRTVFPLTFAELVRITGGQVCEVA
HHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure 
TEVLPETSRQLQATLAGLGCRGRIRQLPDSTHSANDASAAIGCAIDAIASSLLFMADDS
CCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCC
PLLVMASGAHRVDTDRVAQLVGALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIRTLVDS
CEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
TLEKWDEIWAAGGTPRTVFPLTFAELVRITGGQVCEVA
HHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA