| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627760
Identifier: 169627760
GI number: 169627760
Start: 659940
End: 660992
Strand: Direct
Name: 169627760
Synonym: MAB_0657
Alternate gene names: NA
Gene position: 659940-660992 (Clockwise)
Preceding gene: 169627759
Following gene: 169627761
Centisome position: 13.02
GC content: 61.54
Gene sequence:
>1053_bases ATGACCTTCGAGCCGGTGCTGCCGTGGTGGATGTTCATCGTGCTGGCGGTGGTCATCGTCGCGCTACGGATGTACACGCT GTATCGCGTGCTGGTCGTGGTGGGCGGAGGCAGTCAGCGCAAGGTTGTTTTGCGTTGGAGTCTGTTGACGCTCGTGATCG TCAGCGTATTCGCTGCCGCGGCCCGGCCGGGGATCGAGCCCACGCGGCACGTGCTGACGGAATCCCATGCGGTTGCGGCC GCGAACAGCAACGTGAATGTCTTCTTTGTTGTCGATCGGTCCATCAACTCCAGGGCTGAGGACTACGGAAGCGGGCAATT CCGGATGGCGGGTATTCGCGCGGATATGGATGCCGTCGTCAACCAGTATCCGCAAGGTCGGTTTTCCATTACCTCGTTCG CCACGGGCGCGCGTGTGGACTGGCCGCTCTCTGAAGATATTTGGAGTTTGCGGGCGCTGCTCAAGGGTTACTCGGCATAT GTGTCGGAGCTGGACTCGGTGTACCGGGTCGAGGTGGCGGCTGCCGCCGATGAGCTCAGAGGGCAACTCGAACTGGCTCG TCGGCAGTACCCCGGCTCAAGCAACGTCGTGTTCTACCTCGGAGAGGGGGCGGGTGCGTCGCGCCAGCCCGCCAAGAGCT TTGATATCCCCGCGGATCTGGTCGACGGAGGCGCGGTGCTCGGCTACGGAACCACTGACGGTGGCGCAGTGGCCAGTCAG CTCGCGGCCAACGGTGAGAAGACCTATTTTCAGAACGCCGCGGGTACCGGTCCGTTCCTGTCCATCCTTGACGAACGGTC CCTGAAAGGCATCGCAGAACAGCTTCACGTGCGATATGTCCATCGGGTACAGGGTGATTCGATTGCCCCGGTGATCCCGG CGCTCGATCCGTCGGCGGCCACCAGCGAGCAGCGTTCAATTTCGCTTCCCGGGAGCCGGACAGAGTTCTATTGGGTATTC ACGGGTATTGCGATGGTCCTAATGTTCTATGAACTGTTTGCCATGGTTCGCGAGTACCGCACGTCGCGCATCACGAGGGT GAGGCCGACGTGA
Upstream 100 bases:
>100_bases CGGTCTATGTGCAGAAGGTGCAGGACCATCCGAATCTCATCCTGGCGATCGCGCTTGCGATCGCGGTAATCTTCGCGTCG GCTCTGGCTGGGGTGCGCCG
Downstream 100 bases:
>100_bases ACCCGCGGTCGATTCTTGTTTTGGTGCAACGGTTCTTCAGCGAAGGCCCGAGCCGCAAGGTGCTGCGGCGCAGACTGGTG GCCCTCTCGGTGTTGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A-Like Protein; Von Willebrand Factor Type A Domain-Containing Protein
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTFEPVLPWWMFIVLAVVIVALRMYTLYRVLVVVGGGSQRKVVLRWSLLTLVIVSVFAAAARPGIEPTRHVLTESHAVAA ANSNVNVFFVVDRSINSRAEDYGSGQFRMAGIRADMDAVVNQYPQGRFSITSFATGARVDWPLSEDIWSLRALLKGYSAY VSELDSVYRVEVAAAADELRGQLELARRQYPGSSNVVFYLGEGAGASRQPAKSFDIPADLVDGGAVLGYGTTDGGAVASQ LAANGEKTYFQNAAGTGPFLSILDERSLKGIAEQLHVRYVHRVQGDSIAPVIPALDPSAATSEQRSISLPGSRTEFYWVF TGIAMVLMFYELFAMVREYRTSRITRVRPT
Sequences:
>Translated_350_residues MTFEPVLPWWMFIVLAVVIVALRMYTLYRVLVVVGGGSQRKVVLRWSLLTLVIVSVFAAAARPGIEPTRHVLTESHAVAA ANSNVNVFFVVDRSINSRAEDYGSGQFRMAGIRADMDAVVNQYPQGRFSITSFATGARVDWPLSEDIWSLRALLKGYSAY VSELDSVYRVEVAAAADELRGQLELARRQYPGSSNVVFYLGEGAGASRQPAKSFDIPADLVDGGAVLGYGTTDGGAVASQ LAANGEKTYFQNAAGTGPFLSILDERSLKGIAEQLHVRYVHRVQGDSIAPVIPALDPSAATSEQRSISLPGSRTEFYWVF TGIAMVLMFYELFAMVREYRTSRITRVRPT >Mature_349_residues TFEPVLPWWMFIVLAVVIVALRMYTLYRVLVVVGGGSQRKVVLRWSLLTLVIVSVFAAAARPGIEPTRHVLTESHAVAAA NSNVNVFFVVDRSINSRAEDYGSGQFRMAGIRADMDAVVNQYPQGRFSITSFATGARVDWPLSEDIWSLRALLKGYSAYV SELDSVYRVEVAAAADELRGQLELARRQYPGSSNVVFYLGEGAGASRQPAKSFDIPADLVDGGAVLGYGTTDGGAVASQL AANGEKTYFQNAAGTGPFLSILDERSLKGIAEQLHVRYVHRVQGDSIAPVIPALDPSAATSEQRSISLPGSRTEFYWVFT GIAMVLMFYELFAMVREYRTSRITRVRPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38305; Mature: 38174
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFEPVLPWWMFIVLAVVIVALRMYTLYRVLVVVGGGSQRKVVLRWSLLTLVIVSVFAAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHHHHHHH ARPGIEPTRHVLTESHAVAAANSNVNVFFVVDRSINSRAEDYGSGQFRMAGIRADMDAVV HCCCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCHHHCCCCCEEEEECHHHHHHHH NQYPQGRFSITSFATGARVDWPLSEDIWSLRALLKGYSAYVSELDSVYRVEVAAAADELR HHCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQLELARRQYPGSSNVVFYLGEGAGASRQPAKSFDIPADLVDGGAVLGYGTTDGGAVASQ HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHHH LAANGEKTYFQNAAGTGPFLSILDERSLKGIAEQLHVRYVHRVQGDSIAPVIPALDPSAA HHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TSEQRSISLPGSRTEFYWVFTGIAMVLMFYELFAMVREYRTSRITRVRPT CCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCC >Mature Secondary Structure TFEPVLPWWMFIVLAVVIVALRMYTLYRVLVVVGGGSQRKVVLRWSLLTLVIVSVFAAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHHHHHHH ARPGIEPTRHVLTESHAVAAANSNVNVFFVVDRSINSRAEDYGSGQFRMAGIRADMDAVV HCCCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCHHHCCCCCEEEEECHHHHHHHH NQYPQGRFSITSFATGARVDWPLSEDIWSLRALLKGYSAYVSELDSVYRVEVAAAADELR HHCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQLELARRQYPGSSNVVFYLGEGAGASRQPAKSFDIPADLVDGGAVLGYGTTDGGAVASQ HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHHH LAANGEKTYFQNAAGTGPFLSILDERSLKGIAEQLHVRYVHRVQGDSIAPVIPALDPSAA HHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TSEQRSISLPGSRTEFYWVFTGIAMVLMFYELFAMVREYRTSRITRVRPT CCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA