| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is plcN [H]
Identifier: 169627659
GI number: 169627659
Start: 556451
End: 557890
Strand: Direct
Name: plcN [H]
Synonym: MAB_0555
Alternate gene names: 169627659
Gene position: 556451-557890 (Clockwise)
Preceding gene: 169627658
Following gene: 169627660
Centisome position: 10.98
GC content: 65.49
Gene sequence:
>1440_bases ATGAGCCCGCTGACCCGCCGCCGCCTGCTCACGTCGGCGGCGGGCACCGCGGCGTTCAGTGCCGCCGTCTCGCTCATGCC CGCCAACCTCCAGCGTGTCCTGGCCCAGCCGGCACCCAGAAGCGGTTCGCTCAGGGACGTCGAGCACGTGGTGGTCCTCA TGATGGAGAACCGGTCCTTCGATCATTACTTCGGCACCCTGTCCGGTGTCAGGGGCTTTGACGACCCGACCGCCGTCACC CTCTCGACAGGTAAATCCGTCTTCCATCAGCCCGACCCGCAGAACCCCGACGGTTACTTGCTGCCCTTCCACCTCGACAC CGCGGTGAACAGCGTGCAGAAGATCCCCACGACCAGTCACGCCTGGTCGGTGCAGCACGACTCGTGGAACCACGGGAAGA TGGACAACTGGATGGCTGCTCATCGCAAGGCCGACGGTGAGCATTACCCGTATGTGATGGGCTATTACGAGCGGGCGGAC ATTCCCTTTCATTTCGCGCTCGCCGAGGCGTTCACCGTCTGCGACAACTTTCACTCCTCGGTGATGGGGCCCACCTGGCC CAACCGGATGATGTGGATGACCGGCACCATCGATCCCGACGCCGCGCACGGCGGCCCGATCATCCGGAATACCCCCGTGT CCGGTGGCTATGGCTGGACCACCTACGCCGAACGGCTGGAGGCCGCCGGTGTGAGTTGGCGCGTGTATGCCGAAGAGGAC GACTACGGCGGCTGCAATGTGTTGAAGCTATTCAGCCGCTTTCAGCGGAGTAGACCCGGGGAACCCTTATACGACAAGGG GATAGCCCCCGTACGTGCCACGCAGTTCGAAGACGACGCGCGAGCGGGAAGATTGCCCGCGGTGTCCTGGCTCATCATGA CGAGCACCGCGAGTGAACATCCGGACTATCGGCCGGCCGATGGCGCGGCGTACATCGCGAGCAAGATTGACGCGATCGCC GCCAACCCCGAGGTGTGGGCCAAGACGGTATTCATCCTCAACTACGACGAGAACGATGGCCTGTTCGACCACGTGGTGCC GCCGACGCCGCCGCCCGGTACTCCCGGAGAGTGGGTCAAGGGTGTGCCGATAGGCGGCGGATTCCGGGTGCCGGCCATCG TGATTTCGCCGTGGTCGGTCGGCGGGTGGGTGGCCGGCGAGTCCTTTGACCACACCTCGGTACTGCGATTCCTTGAAGAG TTCACGGGTGTGCGCGAGCCGAACATCTCGGGGTGGAGGCGCAAAACATTTGGGAATCTGCTCTCGGCCTTCGGGTTCGA CAGCCCGGTGCGGCCGGCGCCGGAGTTGCCGGACACCGCTGCGGTGGTTGCGGCCGCCGATCGTACGGACACCCGGCCGC CGCCGGTGATACCGCCAGCGCCGCAGACCAGCCCGGTTCAAGAACCGGGCTCGCGTCCGCGGCGGTACCCACGCCGCTAG
Upstream 100 bases:
>100_bases CATCTGATGCACGACGATTCACCGAAGCTTTACCGCAGCGCCGTCTCCGACTTCCTCGCGGCGCCGGGTGCGCCAGGGGC GTCGGTCGTAGCCTGAAGCG
Downstream 100 bases:
>100_bases TAGCGCGTCCGGATGGCTTCCATTTCATGCCGTTGCCGCTCCAGATCGCGATCCTCGGCGAACGTGCCACCCATCGGCGC GGCAATCCGGAACTGATCGA
Product: non-hemolytic phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSPLTRRRLLTSAAGTAAFSAAVSLMPANLQRVLAQPAPRSGSLRDVEHVVVLMMENRSFDHYFGTLSGVRGFDDPTAVT LSTGKSVFHQPDPQNPDGYLLPFHLDTAVNSVQKIPTTSHAWSVQHDSWNHGKMDNWMAAHRKADGEHYPYVMGYYERAD IPFHFALAEAFTVCDNFHSSVMGPTWPNRMMWMTGTIDPDAAHGGPIIRNTPVSGGYGWTTYAERLEAAGVSWRVYAEED DYGGCNVLKLFSRFQRSRPGEPLYDKGIAPVRATQFEDDARAGRLPAVSWLIMTSTASEHPDYRPADGAAYIASKIDAIA ANPEVWAKTVFILNYDENDGLFDHVVPPTPPPGTPGEWVKGVPIGGGFRVPAIVISPWSVGGWVAGESFDHTSVLRFLEE FTGVREPNISGWRRKTFGNLLSAFGFDSPVRPAPELPDTAAVVAAADRTDTRPPPVIPPAPQTSPVQEPGSRPRRYPRR
Sequences:
>Translated_479_residues MSPLTRRRLLTSAAGTAAFSAAVSLMPANLQRVLAQPAPRSGSLRDVEHVVVLMMENRSFDHYFGTLSGVRGFDDPTAVT LSTGKSVFHQPDPQNPDGYLLPFHLDTAVNSVQKIPTTSHAWSVQHDSWNHGKMDNWMAAHRKADGEHYPYVMGYYERAD IPFHFALAEAFTVCDNFHSSVMGPTWPNRMMWMTGTIDPDAAHGGPIIRNTPVSGGYGWTTYAERLEAAGVSWRVYAEED DYGGCNVLKLFSRFQRSRPGEPLYDKGIAPVRATQFEDDARAGRLPAVSWLIMTSTASEHPDYRPADGAAYIASKIDAIA ANPEVWAKTVFILNYDENDGLFDHVVPPTPPPGTPGEWVKGVPIGGGFRVPAIVISPWSVGGWVAGESFDHTSVLRFLEE FTGVREPNISGWRRKTFGNLLSAFGFDSPVRPAPELPDTAAVVAAADRTDTRPPPVIPPAPQTSPVQEPGSRPRRYPRR >Mature_478_residues SPLTRRRLLTSAAGTAAFSAAVSLMPANLQRVLAQPAPRSGSLRDVEHVVVLMMENRSFDHYFGTLSGVRGFDDPTAVTL STGKSVFHQPDPQNPDGYLLPFHLDTAVNSVQKIPTTSHAWSVQHDSWNHGKMDNWMAAHRKADGEHYPYVMGYYERADI PFHFALAEAFTVCDNFHSSVMGPTWPNRMMWMTGTIDPDAAHGGPIIRNTPVSGGYGWTTYAERLEAAGVSWRVYAEEDD YGGCNVLKLFSRFQRSRPGEPLYDKGIAPVRATQFEDDARAGRLPAVSWLIMTSTASEHPDYRPADGAAYIASKIDAIAA NPEVWAKTVFILNYDENDGLFDHVVPPTPPPGTPGEWVKGVPIGGGFRVPAIVISPWSVGGWVAGESFDHTSVLRFLEEF TGVREPNISGWRRKTFGNLLSAFGFDSPVRPAPELPDTAAVVAAADRTDTRPPPVIPPAPQTSPVQEPGSRPRRYPRR
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 52621; Mature: 52489
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLTRRRLLTSAAGTAAFSAAVSLMPANLQRVLAQPAPRSGSLRDVEHVVVLMMENRSF CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCEEEEEEECCCCC DHYFGTLSGVRGFDDPTAVTLSTGKSVFHQPDPQNPDGYLLPFHLDTAVNSVQKIPTTSH HHHHHHHHCCCCCCCCCEEEEECCCHHHCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCC AWSVQHDSWNHGKMDNWMAAHRKADGEHYPYVMGYYERADIPFHFALAEAFTVCDNFHSS EEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHH VMGPTWPNRMMWMTGTIDPDAAHGGPIIRNTPVSGGYGWTTYAERLEAAGVSWRVYAEED CCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCC DYGGCNVLKLFSRFQRSRPGEPLYDKGIAPVRATQFEDDARAGRLPAVSWLIMTSTASEH CCCCHHHHHHHHHHHHCCCCCCHHHCCCCCEEECCCCCCHHCCCCCEEEEEEEECCCCCC PDYRPADGAAYIASKIDAIAANPEVWAKTVFILNYDENDGLFDHVVPPTPPPGTPGEWVK CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEE GVPIGGGFRVPAIVISPWSVGGWVAGESFDHTSVLRFLEEFTGVREPNISGWRRKTFGNL CCCCCCCCCCCEEEEECCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LSAFGFDSPVRPAPELPDTAAVVAAADRTDTRPPPVIPPAPQTSPVQEPGSRPRRYPRR HHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPLTRRRLLTSAAGTAAFSAAVSLMPANLQRVLAQPAPRSGSLRDVEHVVVLMMENRSF CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCEEEEEEECCCCC DHYFGTLSGVRGFDDPTAVTLSTGKSVFHQPDPQNPDGYLLPFHLDTAVNSVQKIPTTSH HHHHHHHHCCCCCCCCCEEEEECCCHHHCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCC AWSVQHDSWNHGKMDNWMAAHRKADGEHYPYVMGYYERADIPFHFALAEAFTVCDNFHSS EEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHH VMGPTWPNRMMWMTGTIDPDAAHGGPIIRNTPVSGGYGWTTYAERLEAAGVSWRVYAEED CCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCC DYGGCNVLKLFSRFQRSRPGEPLYDKGIAPVRATQFEDDARAGRLPAVSWLIMTSTASEH CCCCHHHHHHHHHHHHCCCCCCHHHCCCCCEEECCCCCCHHCCCCCEEEEEEEECCCCCC PDYRPADGAAYIASKIDAIAANPEVWAKTVFILNYDENDGLFDHVVPPTPPPGTPGEWVK CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEE GVPIGGGFRVPAIVISPWSVGGWVAGESFDHTSVLRFLEEFTGVREPNISGWRRKTFGNL CCCCCCCCCCCEEEEECCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LSAFGFDSPVRPAPELPDTAAVVAAADRTDTRPPPVIPPAPQTSPVQEPGSRPRRYPRR HHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120196; 10984043 [H]