| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627643
Identifier: 169627643
GI number: 169627643
Start: 539640
End: 541121
Strand: Direct
Name: 169627643
Synonym: MAB_0539
Alternate gene names: NA
Gene position: 539640-541121 (Clockwise)
Preceding gene: 169627642
Following gene: 169627644
Centisome position: 10.65
GC content: 69.16
Gene sequence:
>1482_bases ATGACCATGCCCACCCGAGCGGCTAAGCCCCGGCGTGGCAGCAGGCGTCCCGGCTGGGCGTTGCTGACCGCGTTGCTGGT GCTCGCGATCGGGTCCGGCATCGCGCTCGTCTTCACCGATAAGGCCATATATTTGCGCGTCGGCCTGTTGCTGGCGCTGT GGGCGGCTGTCATCGCATCGTTCGCAGCACTGACCTATCGCCGGCAGAGCGATACCGATCAAGCCAAGGTGCGCGATCAG AAACTCGTCTACGACCTGCAGCTGGAACGGGAGATCTCGGCACGTCGTGAGTACGAGCTGACCGTCGAGAGCCGATTGCG CCAGCAGCTGGCGGGTGAGATCGAGGCACAGGCGGCTGACGAGATCGCGACGTTGCGGGCCGAGCTCGCCGCATTGCGCA CCAACCTGGAGATCCTGTTCAACACCGATCTCAGTGACCGCCCCGCGATCGAGCACGACCCGATTCGCGCCCTCGGGCCC TGGCCCGGGGCCGAGCCGCAGCCGGTGCCGACGACGAGCACCGCCGCCTTCGCCCACTCCGTTCGCGAGCCGCAGCCCGC TGTCGCCGACGAGTACCAGGATGTCACCGCCGTCGATGAGGACAGCCGGACATCGGAGTACCCGATCATCGACGTCGCCG AAGACCCCCACCATGTGGACCAGGAACAGGCGCCCCCGACACCGCCCTATCCCACCCCTCCTTATTACGGGGCGGCTCAA CCTCACGAGCCAGAGCCGTACCAGCAGCCGGTGTCCTCCGGGACGCATTGGCGCCCGCAACCCGAACCGCATGTGGCGCA GCCTCCGGTACCCGGACACGAACAGCAATTCCCGGCCGCCGCCGAGCCCACGCAGCAACCATATTGGGCTGCCAGACAAG AGGATTGGGACGCCGCCGCCGACGGTGAGGATTGGGATCCGGTCCCCGCGCCGATGGCACCGCCCGAACAGCCTGCTCCC CAGCAGGCATGGAACGCGCCGGCGCCGGAATGGCATGTTCCGCAGCCCCCCGCGCCGCCGCCCAGTGCCTGGGCCCCGGC ACCGGCGGAAGGTCAGTGGTTACCCCCCGGGACTGCAGGCAGCAATTGGGCCTCCAACGAGCCTGTCGCGCCGCCGAGCC CCTATCAGGCAGAACCCGCGGCCGGCGGACGTCACTCCGGCACCCCGTCCCGGCATCAGGCCCCTGCCGCAGCCGAGAAC ACGGGCGGCGGACACTGGGCCCCCGAACCCTCGTACCCACCACCGCCGGCTCCCGAGCAGCCGAACTATCCGGAGAGCTC GGGTGGGCATCGGGCACCGGAAACCGAGCCGGAGGAGAAGCGCGGAAAGCGCCGGGCTCCCGAACCCGAGGAATCCGAAG AAACACGTGGTCGGCGTCGCGCGGAGGACACGGGCGGTTTCTCGGTCGCGGACCTGCTGGGACGCATCCAAACCGATTCT TCCGAGTCCGGCGGCGGCCGTCGGCGCCGCCGTGAGGACTGA
Upstream 100 bases:
>100_bases CCGGACCCGCCCGCGACCCCCGCGAGATAGCACCCACGCATGTCGAATCGCCGATTCGAGGTCGGCCAGCACACTGCGCT GTCCAGGTACAGTCACCTCC
Downstream 100 bases:
>100_bases TCCGCGGCGATATCGTCACCGTGCGTCAAAGTGAGCAATCTAACGGCTCACGCCTCTGCCGATAGCGCAGCCGGAGGACT ACTCTGCTGGTGACCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Transmembrane Protein Rich In Alanine Arginine And Proline; Integral Membrane Protein
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MTMPTRAAKPRRGSRRPGWALLTALLVLAIGSGIALVFTDKAIYLRVGLLLALWAAVIASFAALTYRRQSDTDQAKVRDQ KLVYDLQLEREISARREYELTVESRLRQQLAGEIEAQAADEIATLRAELAALRTNLEILFNTDLSDRPAIEHDPIRALGP WPGAEPQPVPTTSTAAFAHSVREPQPAVADEYQDVTAVDEDSRTSEYPIIDVAEDPHHVDQEQAPPTPPYPTPPYYGAAQ PHEPEPYQQPVSSGTHWRPQPEPHVAQPPVPGHEQQFPAAAEPTQQPYWAARQEDWDAAADGEDWDPVPAPMAPPEQPAP QQAWNAPAPEWHVPQPPAPPPSAWAPAPAEGQWLPPGTAGSNWASNEPVAPPSPYQAEPAAGGRHSGTPSRHQAPAAAEN TGGGHWAPEPSYPPPPAPEQPNYPESSGGHRAPETEPEEKRGKRRAPEPEESEETRGRRRAEDTGGFSVADLLGRIQTDS SESGGGRRRRRED
Sequences:
>Translated_493_residues MTMPTRAAKPRRGSRRPGWALLTALLVLAIGSGIALVFTDKAIYLRVGLLLALWAAVIASFAALTYRRQSDTDQAKVRDQ KLVYDLQLEREISARREYELTVESRLRQQLAGEIEAQAADEIATLRAELAALRTNLEILFNTDLSDRPAIEHDPIRALGP WPGAEPQPVPTTSTAAFAHSVREPQPAVADEYQDVTAVDEDSRTSEYPIIDVAEDPHHVDQEQAPPTPPYPTPPYYGAAQ PHEPEPYQQPVSSGTHWRPQPEPHVAQPPVPGHEQQFPAAAEPTQQPYWAARQEDWDAAADGEDWDPVPAPMAPPEQPAP QQAWNAPAPEWHVPQPPAPPPSAWAPAPAEGQWLPPGTAGSNWASNEPVAPPSPYQAEPAAGGRHSGTPSRHQAPAAAEN TGGGHWAPEPSYPPPPAPEQPNYPESSGGHRAPETEPEEKRGKRRAPEPEESEETRGRRRAEDTGGFSVADLLGRIQTDS SESGGGRRRRRED >Mature_492_residues TMPTRAAKPRRGSRRPGWALLTALLVLAIGSGIALVFTDKAIYLRVGLLLALWAAVIASFAALTYRRQSDTDQAKVRDQK LVYDLQLEREISARREYELTVESRLRQQLAGEIEAQAADEIATLRAELAALRTNLEILFNTDLSDRPAIEHDPIRALGPW PGAEPQPVPTTSTAAFAHSVREPQPAVADEYQDVTAVDEDSRTSEYPIIDVAEDPHHVDQEQAPPTPPYPTPPYYGAAQP HEPEPYQQPVSSGTHWRPQPEPHVAQPPVPGHEQQFPAAAEPTQQPYWAARQEDWDAAADGEDWDPVPAPMAPPEQPAPQ QAWNAPAPEWHVPQPPAPPPSAWAPAPAEGQWLPPGTAGSNWASNEPVAPPSPYQAEPAAGGRHSGTPSRHQAPAAAENT GGGHWAPEPSYPPPPAPEQPNYPESSGGHRAPETEPEEKRGKRRAPEPEESEETRGRRRAEDTGGFSVADLLGRIQTDSS ESGGGRRRRRED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53751; Mature: 53620
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPTRAAKPRRGSRRPGWALLTALLVLAIGSGIALVFTDKAIYLRVGLLLALWAAVIAS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHH FAALTYRRQSDTDQAKVRDQKLVYDLQLEREISARREYELTVESRLRQQLAGEIEAQAAD HHHHHHHHCCCCHHHHHHHHHHEEHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH EIATLRAELAALRTNLEILFNTDLSDRPAIEHDPIRALGPWPGAEPQPVPTTSTAAFAHS HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHH VREPQPAVADEYQDVTAVDEDSRTSEYPIIDVAEDPHHVDQEQAPPTPPYPTPPYYGAAQ HCCCCCHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC PHEPEPYQQPVSSGTHWRPQPEPHVAQPPVPGHEQQFPAAAEPTQQPYWAARQEDWDAAA CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC DGEDWDPVPAPMAPPEQPAPQQAWNAPAPEWHVPQPPAPPPSAWAPAPAEGQWLPPGTAG CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SNWASNEPVAPPSPYQAEPAAGGRHSGTPSRHQAPAAAENTGGGHWAPEPSYPPPPAPEQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PNYPESSGGHRAPETEPEEKRGKRRAPEPEESEETRGRRRAEDTGGFSVADLLGRIQTDS CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC SESGGGRRRRRED CCCCCCCCCCCCC >Mature Secondary Structure TMPTRAAKPRRGSRRPGWALLTALLVLAIGSGIALVFTDKAIYLRVGLLLALWAAVIAS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHH FAALTYRRQSDTDQAKVRDQKLVYDLQLEREISARREYELTVESRLRQQLAGEIEAQAAD HHHHHHHHCCCCHHHHHHHHHHEEHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH EIATLRAELAALRTNLEILFNTDLSDRPAIEHDPIRALGPWPGAEPQPVPTTSTAAFAHS HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHH VREPQPAVADEYQDVTAVDEDSRTSEYPIIDVAEDPHHVDQEQAPPTPPYPTPPYYGAAQ HCCCCCHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC PHEPEPYQQPVSSGTHWRPQPEPHVAQPPVPGHEQQFPAAAEPTQQPYWAARQEDWDAAA CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC DGEDWDPVPAPMAPPEQPAPQQAWNAPAPEWHVPQPPAPPPSAWAPAPAEGQWLPPGTAG CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SNWASNEPVAPPSPYQAEPAAGGRHSGTPSRHQAPAAAENTGGGHWAPEPSYPPPPAPEQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PNYPESSGGHRAPETEPEEKRGKRRAPEPEESEETRGRRRAEDTGGFSVADLLGRIQTDS CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC SESGGGRRRRRED CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA