| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627602
Identifier: 169627602
GI number: 169627602
Start: 496272
End: 496706
Strand: Reverse
Name: 169627602
Synonym: MAB_0498c
Alternate gene names: NA
Gene position: 496706-496272 (Counterclockwise)
Preceding gene: 169627604
Following gene: 169627600
Centisome position: 9.8
GC content: 68.05
Gene sequence:
>435_bases ATGGCTCCGCTCATCGCCCTTGTGGTCGGAACCCTGTCGGCGCGGCTAGCCGGCATTCTGGGACTCGCACCCGCCGACTC CTGGCCCGCCGCCGTGGCAGTCGGTCTCGCCGCCATGTTCACGCTGACCGGTATCGCGCATTTCGTGCCGAAGATGCGTG ATGCCATGATCGCGATAGTGCCGCCGCGGATCCCGGCGCCCGGGTTCTTGGTGGCGCTGACAGGGGCTCTTGAGCTGCTC GGCGCGGCCGGCGTGCTGATTCCCGCAACCAGAGTGGTGGCGGCGGCGAGTCTGGCCGCCCTGTTGGTGGCGATGTTTCC CGCCAATGTGTATGCCGCGAGCCAGCGGTCCAATCCGCTGTCGACTCCGCTGGGATGGAGGACCCTTGAGCAATTGCTCT TCCTCGCGGCGGCGGCAACCGCCGCATGCGGCTAG
Upstream 100 bases:
>100_bases GCCATGGTGATACGACACAGCACCAGCATAACCAGAATCTTGACAGTGGCTAGATATCGAGTACCGTCAATCTAGCCACT GTCAAGATCGGAGGGCAATC
Downstream 100 bases:
>100_bases ATCAAGTGCCAGACCAGGACGGCGGCCAGCACACCCATGCCATTCAGCGACCAATGCAGCGCGATGGGCGCCAAGAGGCT GCCGCTACGCCTGCGCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MAPLIALVVGTLSARLAGILGLAPADSWPAAVAVGLAAMFTLTGIAHFVPKMRDAMIAIVPPRIPAPGFLVALTGALELL GAAGVLIPATRVVAAASLAALLVAMFPANVYAASQRSNPLSTPLGWRTLEQLLFLAAAATAACG
Sequences:
>Translated_144_residues MAPLIALVVGTLSARLAGILGLAPADSWPAAVAVGLAAMFTLTGIAHFVPKMRDAMIAIVPPRIPAPGFLVALTGALELL GAAGVLIPATRVVAAASLAALLVAMFPANVYAASQRSNPLSTPLGWRTLEQLLFLAAAATAACG >Mature_143_residues APLIALVVGTLSARLAGILGLAPADSWPAAVAVGLAAMFTLTGIAHFVPKMRDAMIAIVPPRIPAPGFLVALTGALELLG AAGVLIPATRVVAAASLAALLVAMFPANVYAASQRSNPLSTPLGWRTLEQLLFLAAAATAACG
Specific function: Unknown
COG id: COG4270
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14420; Mature: 14289
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLIALVVGTLSARLAGILGLAPADSWPAAVAVGLAAMFTLTGIAHFVPKMRDAMIAIV CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE PPRIPAPGFLVALTGALELLGAAGVLIPATRVVAAASLAALLVAMFPANVYAASQRSNPL CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC STPLGWRTLEQLLFLAAAATAACG CCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure APLIALVVGTLSARLAGILGLAPADSWPAAVAVGLAAMFTLTGIAHFVPKMRDAMIAIV CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE PPRIPAPGFLVALTGALELLGAAGVLIPATRVVAAASLAALLVAMFPANVYAASQRSNPL CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC STPLGWRTLEQLLFLAAAATAACG CCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA