| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627565
Identifier: 169627565
GI number: 169627565
Start: 461243
End: 461578
Strand: Direct
Name: 169627565
Synonym: MAB_0461
Alternate gene names: NA
Gene position: 461243-461578 (Clockwise)
Preceding gene: 169627564
Following gene: 169627568
Centisome position: 9.1
GC content: 66.07
Gene sequence:
>336_bases ATGGGCAACAAACGTTTTCTTCGCCGCACCGGGACCGCTGTCGTGGCCGCTGTTGCTGCGGCGACTGTGGCCGGGGCCGG TAGCGCCTGGGCGGGACCTGCTGCCCCCAATGCGCTGCAGGTCATCATGGCGCTGCAGCGCCAAGGCGACAAGGTCATCG TCAACCGCCGCGGGGGCAAGCCGCTGCAACTGTGCACCGTGACCTCGGTACGCCAAGGCAGAGCCGAGTATTGGTGGACC CATCCGCAGGTGGTGGATCCCAACCGTGCCAAACGCGCTAACGGGGTGGGCACGCAACTGCTGTACCGCACCATGTACGT CGACGTGCAGTGCTGA
Upstream 100 bases:
>100_bases CTGCCGATGTCTGGCCATTGTGGCCGCGAGGCATCGGCTTTCTGGTGTCCTTCGACAGCTCCTGCCGCCTGCGTGCGGCA CCCCAACGTAGGGAATTCTC
Downstream 100 bases:
>100_bases TCGGCCGCTGCCGCCACCGACTGCCAGCGGCGTGTAGCGGGGCCGGCCGGTGGCGGCAGCGGGTTCTCGGGCTTGCGGTG CTGGGTTAGGCTCCGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MGNKRFLRRTGTAVVAAVAAATVAGAGSAWAGPAAPNALQVIMALQRQGDKVIVNRRGGKPLQLCTVTSVRQGRAEYWWT HPQVVDPNRAKRANGVGTQLLYRTMYVDVQC
Sequences:
>Translated_111_residues MGNKRFLRRTGTAVVAAVAAATVAGAGSAWAGPAAPNALQVIMALQRQGDKVIVNRRGGKPLQLCTVTSVRQGRAEYWWT HPQVVDPNRAKRANGVGTQLLYRTMYVDVQC >Mature_110_residues GNKRFLRRTGTAVVAAVAAATVAGAGSAWAGPAAPNALQVIMALQRQGDKVIVNRRGGKPLQLCTVTSVRQGRAEYWWTH PQVVDPNRAKRANGVGTQLLYRTMYVDVQC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11962; Mature: 11831
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKRFLRRTGTAVVAAVAAATVAGAGSAWAGPAAPNALQVIMALQRQGDKVIVNRRGGK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC PLQLCTVTSVRQGRAEYWWTHPQVVDPNRAKRANGVGTQLLYRTMYVDVQC EEEEEEECCHHCCCCCEEECCCEEECCCCCCCCCCCHHHHHHHHHEEEECC >Mature Secondary Structure GNKRFLRRTGTAVVAAVAAATVAGAGSAWAGPAAPNALQVIMALQRQGDKVIVNRRGGK CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC PLQLCTVTSVRQGRAEYWWTHPQVVDPNRAKRANGVGTQLLYRTMYVDVQC EEEEEEECCHHCCCCCEEECCCEEECCCCCCCCCCCHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA