| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627561
Identifier: 169627561
GI number: 169627561
Start: 458467
End: 458868
Strand: Direct
Name: 169627561
Synonym: MAB_0457
Alternate gene names: NA
Gene position: 458467-458868 (Clockwise)
Preceding gene: 169627560
Following gene: 169627562
Centisome position: 9.05
GC content: 67.66
Gene sequence:
>402_bases ATGACGCCAGCTCTCAGAGCATCCACGATCGGACCCATGGCGACCGCGCTGAGCGCACCGCCGCGAACATCACGGCGCTC ACTCAAGGCGCCCCCTAGGCACCTGGCCGTAGGAGCGCTGTCCGCGGCCGTGAGCGCGGTGATGCTGGCCGCCCCGGCCG CTGCCGGGCCAGGCGAACCTGGACCGCAAGCCCCTGGCAACGCGCAGATCATCATCACTGAGTTGAAGACCCGCGGCGAT CAGGTCATCATCAACGGCGATACCACCGGTAAACCGTTAGCCAAGTGCACCGCCACCGCGGTGCGGGTCGGGCGGCACAT CTACAACCAGGTGCCGCAACGCAAAGGCCCACCGACGCGCACCCTGGCCGCGCACGTCATGTACGTCACGGTGCAGTGCT AG
Upstream 100 bases:
>100_bases ATCCGCCAGCGGCCCCGCCGACGGCGTGTCCCTGACCTTCGCAGGCCTACCGACACCACCCCGTACCACCAATGCTGCTG CAATCCAAGGACATTCACTC
Downstream 100 bases:
>100_bases ACGCCGCCTGCGGGGGCCGCGGGCGGCTACTTGCGTTGGGCTACAACGGGTCTTTGGCCGCGGTGGCCGGCTACGTCAAT TCGGTGGCGCTGTTGGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTPALRASTIGPMATALSAPPRTSRRSLKAPPRHLAVGALSAAVSAVMLAAPAAAGPGEPGPQAPGNAQIIITELKTRGD QVIINGDTTGKPLAKCTATAVRVGRHIYNQVPQRKGPPTRTLAAHVMYVTVQC
Sequences:
>Translated_133_residues MTPALRASTIGPMATALSAPPRTSRRSLKAPPRHLAVGALSAAVSAVMLAAPAAAGPGEPGPQAPGNAQIIITELKTRGD QVIINGDTTGKPLAKCTATAVRVGRHIYNQVPQRKGPPTRTLAAHVMYVTVQC >Mature_132_residues TPALRASTIGPMATALSAPPRTSRRSLKAPPRHLAVGALSAAVSAVMLAAPAAAGPGEPGPQAPGNAQIIITELKTRGDQ VIINGDTTGKPLAKCTATAVRVGRHIYNQVPQRKGPPTRTLAAHVMYVTVQC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13647; Mature: 13516
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPALRASTIGPMATALSAPPRTSRRSLKAPPRHLAVGALSAAVSAVMLAAPAAAGPGEP CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC GPQAPGNAQIIITELKTRGDQVIINGDTTGKPLAKCTATAVRVGRHIYNQVPQRKGPPTR CCCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH TLAAHVMYVTVQC HHEEEEEEEEEEC >Mature Secondary Structure TPALRASTIGPMATALSAPPRTSRRSLKAPPRHLAVGALSAAVSAVMLAAPAAAGPGEP CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC GPQAPGNAQIIITELKTRGDQVIINGDTTGKPLAKCTATAVRVGRHIYNQVPQRKGPPTR CCCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH TLAAHVMYVTVQC HHEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA