| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627534
Identifier: 169627534
GI number: 169627534
Start: 431153
End: 431896
Strand: Direct
Name: 169627534
Synonym: MAB_0430
Alternate gene names: NA
Gene position: 431153-431896 (Clockwise)
Preceding gene: 169627533
Following gene: 169627536
Centisome position: 8.51
GC content: 67.47
Gene sequence:
>744_bases ATGACTGACCCACTCGCACCATTGGCTTCCCTGCCGGGAGTGCCCGAAGCCGCCGAAGCCGCCCGCGACGCGTTGACCAA GGTACATCGTCACCGCGCCAATCTGCGTGGCTGGCCGGTGACCGCGGCGGAGGCAGCGGTACGCGCCGCCAGGTCTTCGT CGGCACTCGATGGCGGCACGATGAAGCTCAGCGCCGATGGGGCGGTGGAAGATCCGATACTCGCCGGCGCGTTACGGGTG GGTCAGGCGCTCGATGGTGACGCGCTGACTCAGCTGGCCGCGGTATGGTCACGCGCGCCACTGCAGGCGCTGGCGCGGTT ACATGTGTTGGCAGCCACCGGCATGGCAGATGAGGACACCCTCGGGCGGCCTCGCCCCGGCGCAGACACCGATCGGCTGG AACTGCTGGCGCAGCTGATCTCGGGGGGGACCTCGGTGCCCGCGCCGATTCTCGCGGCGGTGACGCATGGTGAACTCTTG GCGCTGAACCCATTTGGATCTGCCGATGGTGTTGTCGCGCGTGCCGCGTCCCGATTGGTGACGGTGTCGCGGGGTCTTGA TCCGCATGCGCTCGGCGTGCCCGAAGTGATGTGGATGCGTCAGTCCGGGCGCTACCGGGAGCTGTCCTCCGCCTTCGCCC AAGGCACACCCGAAGCCATCACCGCGTGGATTGTCTTCTGCTGTCAGGCATTAACTGCAGGTGCGGCCGAAGCGACATCG ATCGCCGATACCGCAGCCGGCTGA
Upstream 100 bases:
>100_bases CCTGTTGGCGGCCGTGCCAGTGCCGGATCCGGAGCAGCAGCGGATCCGGCGCGAGGAGCGCCAGGCACTGCGCTGAGCAT GTGAGTACTGTTTATCGATC
Downstream 100 bases:
>100_bases TTCGAACTCGGCTGGGCCGGACATAAAAACGGGCGACGGTCCGAGTGAATCGGCCCGCCGCCCGTTAGCACGGATCCTCC GGTTACCAAGCGTGCAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentation Induced By CAMP Protein Fic; Heat Repeat-Containing PBS Lyase; LOW QUALITY PROTEIN Oxidoreductase
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTDPLAPLASLPGVPEAAEAARDALTKVHRHRANLRGWPVTAAEAAVRAARSSSALDGGTMKLSADGAVEDPILAGALRV GQALDGDALTQLAAVWSRAPLQALARLHVLAATGMADEDTLGRPRPGADTDRLELLAQLISGGTSVPAPILAAVTHGELL ALNPFGSADGVVARAASRLVTVSRGLDPHALGVPEVMWMRQSGRYRELSSAFAQGTPEAITAWIVFCCQALTAGAAEATS IADTAAG
Sequences:
>Translated_247_residues MTDPLAPLASLPGVPEAAEAARDALTKVHRHRANLRGWPVTAAEAAVRAARSSSALDGGTMKLSADGAVEDPILAGALRV GQALDGDALTQLAAVWSRAPLQALARLHVLAATGMADEDTLGRPRPGADTDRLELLAQLISGGTSVPAPILAAVTHGELL ALNPFGSADGVVARAASRLVTVSRGLDPHALGVPEVMWMRQSGRYRELSSAFAQGTPEAITAWIVFCCQALTAGAAEATS IADTAAG >Mature_246_residues TDPLAPLASLPGVPEAAEAARDALTKVHRHRANLRGWPVTAAEAAVRAARSSSALDGGTMKLSADGAVEDPILAGALRVG QALDGDALTQLAAVWSRAPLQALARLHVLAATGMADEDTLGRPRPGADTDRLELLAQLISGGTSVPAPILAAVTHGELLA LNPFGSADGVVARAASRLVTVSRGLDPHALGVPEVMWMRQSGRYRELSSAFAQGTPEAITAWIVFCCQALTAGAAEATSI ADTAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25231; Mature: 25100
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPLAPLASLPGVPEAAEAARDALTKVHRHRANLRGWPVTAAEAAVRAARSSSALDGGT CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCE MKLSADGAVEDPILAGALRVGQALDGDALTQLAAVWSRAPLQALARLHVLAATGMADEDT EEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC LGRPRPGADTDRLELLAQLISGGTSVPAPILAAVTHGELLALNPFGSADGVVARAASRLV CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHH TVSRGLDPHALGVPEVMWMRQSGRYRELSSAFAQGTPEAITAWIVFCCQALTAGAAEATS HHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH IADTAAG HHHHCCC >Mature Secondary Structure TDPLAPLASLPGVPEAAEAARDALTKVHRHRANLRGWPVTAAEAAVRAARSSSALDGGT CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCE MKLSADGAVEDPILAGALRVGQALDGDALTQLAAVWSRAPLQALARLHVLAATGMADEDT EEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC LGRPRPGADTDRLELLAQLISGGTSVPAPILAAVTHGELLALNPFGSADGVVARAASRLV CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHH TVSRGLDPHALGVPEVMWMRQSGRYRELSSAFAQGTPEAITAWIVFCCQALTAGAAEATS HHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH IADTAAG HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA