| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627498
Identifier: 169627498
GI number: 169627498
Start: 389906
End: 391234
Strand: Reverse
Name: 169627498
Synonym: MAB_0394c
Alternate gene names: NA
Gene position: 391234-389906 (Counterclockwise)
Preceding gene: 169627499
Following gene: 169627496
Centisome position: 7.72
GC content: 65.24
Gene sequence:
>1329_bases GTGAGTCCAATCGACGATCTACTGACGACGGCAACGGCTGTCGTCGAGTCGTCGTTCGATGAGCTCAACAATCCCGAGTT GCTTTCGGCACTAAGGCAACTGGAGATCGCACAGCGCAAGATCACTGCGGCCTCACACACACTCACCGCCAGGCTGGTGC AACGCGGTTCACCGGTCGCGTTGGGCGGTACGTCATTCGCGGAAGTGCTGGCACGGTACCTCTCGATAACTACCGCGACC GCCCGGCGCCGCCTCGCCGACGCCGCACATCTCGGCCCACGGCGTGCATTGACCGGCGAGCCCCTGCGACCCGCACTTCC GTATGTGGCCCACGCATTGCGAGAGGGCCGCCTCGGTGATGAGCACGTGCGGATCATCCGCAGGTTCTTCGATGTATTGC CCGACGCGGTCGACGCCGACACCCGCGAGGCCGCCGAGAAGCAGCTGGCATCCATGGGAACCGAATTCGGCCCGGAACAA CTCCGCGCAGGCGCCGATCGGATCGCGGCTCTGGTCAATCCCGATGGGCGGTTCTCTGACATCGACCGCGCCCGCAGGCG GGGCATATCGATCGGACGCCAGGGAGCCGACGGGATGAGCGCCCTCAGCGGCCTGCTGGATCCAGAGACCCGGGCCTACT TTGACGCGGTGCTGAGCAAGCTCGCGGCGCCAGGCATGTGTGATCCTCGCGATGAATCCCCCATGACCGAAGGTGAACCC GACTCGGCGGCCGCCGAGCGAGACACACGAACATCCGCCCAACGAAACCACGATGGGCTACGCGCATGCCTGCGCAGCAC CTTGGCCTCGGGCAAGCTGGGCGCACACCGTGGACTGCCCGTCACCGTGGTGGTCTCGACGACGCTGCGCGAGCTGCAAA GCGCGGCCGGGCGGGCGATATCGGGCAGCGGCAACCTGGTGCCTATCCCCGATCTGATCCGGATGGCTACCCACGCCTTC CACTACCTCACGATATTCGGCGACGACGGTCGCCCACTCCACCTCGGGCGGTCCAAAAGGATCGCCACCCCCGATCAACG AATTGTGCTACACGCCAAGGATCGTGGCTGTTCAGCGCCCGGATGTACCGTGCCCGGTTACCTCTGCCAGGTTCATCACG TCGACGACTGGCGCGACGACGGGCCCACCGACATCGATAATCTGACCTTCGCCTGCGGCCCACACCATCGGCTGCTCCAA CAGGGCTGGACCACCCGAAAGCGCCGCAGTGACGGGATTACCGAATGGATTCCGCCACCGCACCTCGACACCGGCCAGTC CCGCACGAATGATCACCACCATCCTGAGCGGTTCATCCGCCGCTTCTAG
Upstream 100 bases:
>100_bases ACTTCTAAGATCCGACAAGCTGTCCGGTCAATTTGTGGATAGCCATCGTGGTTGTGGATAACCCCGGCCAGCTGTCGGTC GTCGTGCATAGCCTTCAGGC
Downstream 100 bases:
>100_bases CCCGCCAGGTGTGCCGAGAGCAACCACGCGGCCACCGACGCCCGGCCGTCGGGCTCGATCTCGTGCCGGGCGAAGCCCCG CGCTACCCCGGGTTCGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSPIDDLLTTATAVVESSFDELNNPELLSALRQLEIAQRKITAASHTLTARLVQRGSPVALGGTSFAEVLARYLSITTAT ARRRLADAAHLGPRRALTGEPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFGPEQ LRAGADRIAALVNPDGRFSDIDRARRRGISIGRQGADGMSALSGLLDPETRAYFDAVLSKLAAPGMCDPRDESPMTEGEP DSAAAERDTRTSAQRNHDGLRACLRSTLASGKLGAHRGLPVTVVVSTTLRELQSAAGRAISGSGNLVPIPDLIRMATHAF HYLTIFGDDGRPLHLGRSKRIATPDQRIVLHAKDRGCSAPGCTVPGYLCQVHHVDDWRDDGPTDIDNLTFACGPHHRLLQ QGWTTRKRRSDGITEWIPPPHLDTGQSRTNDHHHPERFIRRF
Sequences:
>Translated_442_residues MSPIDDLLTTATAVVESSFDELNNPELLSALRQLEIAQRKITAASHTLTARLVQRGSPVALGGTSFAEVLARYLSITTAT ARRRLADAAHLGPRRALTGEPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFGPEQ LRAGADRIAALVNPDGRFSDIDRARRRGISIGRQGADGMSALSGLLDPETRAYFDAVLSKLAAPGMCDPRDESPMTEGEP DSAAAERDTRTSAQRNHDGLRACLRSTLASGKLGAHRGLPVTVVVSTTLRELQSAAGRAISGSGNLVPIPDLIRMATHAF HYLTIFGDDGRPLHLGRSKRIATPDQRIVLHAKDRGCSAPGCTVPGYLCQVHHVDDWRDDGPTDIDNLTFACGPHHRLLQ QGWTTRKRRSDGITEWIPPPHLDTGQSRTNDHHHPERFIRRF >Mature_441_residues SPIDDLLTTATAVVESSFDELNNPELLSALRQLEIAQRKITAASHTLTARLVQRGSPVALGGTSFAEVLARYLSITTATA RRRLADAAHLGPRRALTGEPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFGPEQL RAGADRIAALVNPDGRFSDIDRARRRGISIGRQGADGMSALSGLLDPETRAYFDAVLSKLAAPGMCDPRDESPMTEGEPD SAAAERDTRTSAQRNHDGLRACLRSTLASGKLGAHRGLPVTVVVSTTLRELQSAAGRAISGSGNLVPIPDLIRMATHAFH YLTIFGDDGRPLHLGRSKRIATPDQRIVLHAKDRGCSAPGCTVPGYLCQVHHVDDWRDDGPTDIDNLTFACGPHHRLLQQ GWTTRKRRSDGITEWIPPPHLDTGQSRTNDHHHPERFIRRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 48251; Mature: 48120
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIDDLLTTATAVVESSFDELNNPELLSALRQLEIAQRKITAASHTLTARLVQRGSPVA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LGGTSFAEVLARYLSITTATARRRLADAAHLGPRRALTGEPLRPALPYVAHALREGRLGD ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH EHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFGPEQLRAGADRIAALVNPDGRFSD HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH IDRARRRGISIGRQGADGMSALSGLLDPETRAYFDAVLSKLAAPGMCDPRDESPMTEGEP HHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC DSAAAERDTRTSAQRNHDGLRACLRSTLASGKLGAHRGLPVTVVVSTTLRELQSAAGRAI CHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCEE SGSGNLVPIPDLIRMATHAFHYLTIFGDDGRPLHLGRSKRIATPDQRIVLHAKDRGCSAP CCCCCEECHHHHHHHHHHHHEEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCC GCTVPGYLCQVHHVDDWRDDGPTDIDNLTFACGPHHRLLQQGWTTRKRRSDGITEWIPPP CCCCCCHHEEEECCCCCCCCCCCCHHCCEECCCCHHHHHHHCCCHHHHHCCCCCCCCCCC HLDTGQSRTNDHHHPERFIRRF CCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure SPIDDLLTTATAVVESSFDELNNPELLSALRQLEIAQRKITAASHTLTARLVQRGSPVA CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LGGTSFAEVLARYLSITTATARRRLADAAHLGPRRALTGEPLRPALPYVAHALREGRLGD ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH EHVRIIRRFFDVLPDAVDADTREAAEKQLASMGTEFGPEQLRAGADRIAALVNPDGRFSD HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH IDRARRRGISIGRQGADGMSALSGLLDPETRAYFDAVLSKLAAPGMCDPRDESPMTEGEP HHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC DSAAAERDTRTSAQRNHDGLRACLRSTLASGKLGAHRGLPVTVVVSTTLRELQSAAGRAI CHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCEE SGSGNLVPIPDLIRMATHAFHYLTIFGDDGRPLHLGRSKRIATPDQRIVLHAKDRGCSAP CCCCCEECHHHHHHHHHHHHEEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCC GCTVPGYLCQVHHVDDWRDDGPTDIDNLTFACGPHHRLLQQGWTTRKRRSDGITEWIPPP CCCCCCHHEEEECCCCCCCCCCCCHHCCEECCCCHHHHHHHCCCHHHHHCCCCCCCCCCC HLDTGQSRTNDHHHPERFIRRF CCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]