| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627471
Identifier: 169627471
GI number: 169627471
Start: 363450
End: 363890
Strand: Reverse
Name: 169627471
Synonym: MAB_0367c
Alternate gene names: NA
Gene position: 363890-363450 (Counterclockwise)
Preceding gene: 169627478
Following gene: 169627469
Centisome position: 7.18
GC content: 65.08
Gene sequence:
>441_bases GTGACCGATGACCGACTCGCCATCCAAGATCTCGTCGCCCGCTATGCCACTGCGGCCGATGACCGCGACGTCGATGCTCT GGTCGCCCTGTTTTCCGCGGATGCCGAGTTGGTGCGGCCGCCCGCCCTGCTCCGCACGGGCGATTCGGCAGTTGTGCGGG GCAGCGTGACCATCGCGGATTCGATTGTCGCGGCGCTCAAGCCGCTATACGCGACGTACCATCTCATCGGGCAACACACG GTGAGCATCGACAGCGATACCGCGGCAGGAAAGGTGTACTGCATGGCGCATCACATCTACCTCCGCGGCAAGGAGTACCG CGACAACACCATGGCGGTGCGGTACCTCGACAACTACCAGCGCGGGCCGACGGGTTGGGTCTTCACCCGCCGCGAACCGG TGGTGGTCTTCAGCGAGGACCGCCCAGTTCGAGTCGGGTAG
Upstream 100 bases:
>100_bases GCGCCACCCGTGACGATTGCAGACACACCATTGATATCCATGAGCCGCACCATAACCGATCGGTTGGTTGGGAGCTGGAG GGCCCATAGGCTTTGTATCC
Downstream 100 bases:
>100_bases CGCACCCGGCCATCTCCTCGAGAACCGCCTCCAGGGTGGTGGCACGTCGAGAGGCCGAGAGCAGCATCCGCCCGGCTCCC GCGTGCGCGGCCTGATCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTDDRLAIQDLVARYATAADDRDVDALVALFSADAELVRPPALLRTGDSAVVRGSVTIADSIVAALKPLYATYHLIGQHT VSIDSDTAAGKVYCMAHHIYLRGKEYRDNTMAVRYLDNYQRGPTGWVFTRREPVVVFSEDRPVRVG
Sequences:
>Translated_146_residues MTDDRLAIQDLVARYATAADDRDVDALVALFSADAELVRPPALLRTGDSAVVRGSVTIADSIVAALKPLYATYHLIGQHT VSIDSDTAAGKVYCMAHHIYLRGKEYRDNTMAVRYLDNYQRGPTGWVFTRREPVVVFSEDRPVRVG >Mature_145_residues TDDRLAIQDLVARYATAADDRDVDALVALFSADAELVRPPALLRTGDSAVVRGSVTIADSIVAALKPLYATYHLIGQHTV SIDSDTAAGKVYCMAHHIYLRGKEYRDNTMAVRYLDNYQRGPTGWVFTRREPVVVFSEDRPVRVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16155; Mature: 16024
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDRLAIQDLVARYATAADDRDVDALVALFSADAELVRPPALLRTGDSAVVRGSVTIAD CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCHHEECCCCEEEEECCHHHH SIVAALKPLYATYHLIGQHTVSIDSDTAAGKVYCMAHHIYLRGKEYRDNTMAVRYLDNYQ HHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEECCCC RGPTGWVFTRREPVVVFSEDRPVRVG CCCCCEEEECCCCEEEECCCCCEECC >Mature Secondary Structure TDDRLAIQDLVARYATAADDRDVDALVALFSADAELVRPPALLRTGDSAVVRGSVTIAD CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCHHEECCCCEEEEECCHHHH SIVAALKPLYATYHLIGQHTVSIDSDTAAGKVYCMAHHIYLRGKEYRDNTMAVRYLDNYQ HHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEECCCC RGPTGWVFTRREPVVVFSEDRPVRVG CCCCCEEEECCCCEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA