| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627462
Identifier: 169627462
GI number: 169627462
Start: 355347
End: 356009
Strand: Direct
Name: 169627462
Synonym: MAB_0358
Alternate gene names: NA
Gene position: 355347-356009 (Clockwise)
Preceding gene: 169627459
Following gene: 169627463
Centisome position: 7.01
GC content: 65.76
Gene sequence:
>663_bases TTGGGGGTGGCGTCGTACCTTTGCGTGCTGGCGATGACAGTGGCGTCCGCGGGCACCGCCTCGGCGAATCCAGATGAGCT GCCTGTGCAGACAGAGGCGTTGTCCAGCCTGATGCTCGAGCCCGGGGACGTGGCACCCGTCATGGGGGCCGGCATGTACG TGGCCGGAGATTGGGCCGCGTTGGTATCGGATCGGACCGACAGGCCCGAATGCGGCAGCGTGGTACTCGCGTCGGGCGCG AGCTATGAATCGTCCAATTATCTGTCCGGGCGGTACCGGTCATTGATCGACAGCCCCAACTGGACGCGGCTGGTCGACCA GAGCATGGTGATTTTTCCCGAGTGGTCGGATGCCACGGACTTCGCGCTCGCCGAGGCCGATCGCTGGCGCGCTTGCGAGA ACCAGCGAGTCACGTCGCTCTTGCCGCAACCCGACGGAAGCACGCGTCGCGAGTGGGTGCAGCTCCGCAAGATCGTCCAG GTCCAGGAGGTTCTGGTGGTCGGCTACACGTGGCCGACGGATTTCGGTGGAGTCATATATTGCCAGCACGCGCTGGCGCC GTTGCGAAATGTGGCTATCGACGTGCGGGCTTGCGCGGAACGGGACGGCAGCCGCGCCCTCGATCTCATCCTAGGGCTGC TGCCCCGCGTGGCCCGGGCATAG
Upstream 100 bases:
>100_bases TGGGGGATTCCGCCGAAAGACAGTGCGATAGAGCACTTCTTGGCAATCCGTGTGTCCCCCGGAAGCCCTCATCTAGGCTC CTGCAGTTATGAGGACTGTT
Downstream 100 bases:
>100_bases CCATACGGAAGGCGCTGTCACCAAACTGGTCTCGGGTAGCCTCGGACGGGTGGCCGATGGAGGCGGCATCCTTGTCTGTG GCGAGACGCTCGTCGATCTG
Product: membrane protein PknM or lipoprotein LppH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MGVASYLCVLAMTVASAGTASANPDELPVQTEALSSLMLEPGDVAPVMGAGMYVAGDWAALVSDRTDRPECGSVVLASGA SYESSNYLSGRYRSLIDSPNWTRLVDQSMVIFPEWSDATDFALAEADRWRACENQRVTSLLPQPDGSTRREWVQLRKIVQ VQEVLVVGYTWPTDFGGVIYCQHALAPLRNVAIDVRACAERDGSRALDLILGLLPRVARA
Sequences:
>Translated_220_residues MGVASYLCVLAMTVASAGTASANPDELPVQTEALSSLMLEPGDVAPVMGAGMYVAGDWAALVSDRTDRPECGSVVLASGA SYESSNYLSGRYRSLIDSPNWTRLVDQSMVIFPEWSDATDFALAEADRWRACENQRVTSLLPQPDGSTRREWVQLRKIVQ VQEVLVVGYTWPTDFGGVIYCQHALAPLRNVAIDVRACAERDGSRALDLILGLLPRVARA >Mature_219_residues GVASYLCVLAMTVASAGTASANPDELPVQTEALSSLMLEPGDVAPVMGAGMYVAGDWAALVSDRTDRPECGSVVLASGAS YESSNYLSGRYRSLIDSPNWTRLVDQSMVIFPEWSDATDFALAEADRWRACENQRVTSLLPQPDGSTRREWVQLRKIVQV QEVLVVGYTWPTDFGGVIYCQHALAPLRNVAIDVRACAERDGSRALDLILGLLPRVARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23852; Mature: 23721
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVASYLCVLAMTVASAGTASANPDELPVQTEALSSLMLEPGDVAPVMGAGMYVAGDWAA CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCEEEECCHHH LVSDRTDRPECGSVVLASGASYESSNYLSGRYRSLIDSPNWTRLVDQSMVIFPEWSDATD HHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCEEEEECCCCCCH FALAEADRWRACENQRVTSLLPQPDGSTRREWVQLRKIVQVQEVLVVGYTWPTDFGGVIY HHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEE CQHALAPLRNVAIDVRACAERDGSRALDLILGLLPRVARA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GVASYLCVLAMTVASAGTASANPDELPVQTEALSSLMLEPGDVAPVMGAGMYVAGDWAA CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCEEEECCHHH LVSDRTDRPECGSVVLASGASYESSNYLSGRYRSLIDSPNWTRLVDQSMVIFPEWSDATD HHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCEEEEECCCCCCH FALAEADRWRACENQRVTSLLPQPDGSTRREWVQLRKIVQVQEVLVVGYTWPTDFGGVIY HHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEE CQHALAPLRNVAIDVRACAERDGSRALDLILGLLPRVARA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA