| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627457
Identifier: 169627457
GI number: 169627457
Start: 350323
End: 350973
Strand: Direct
Name: 169627457
Synonym: MAB_0353
Alternate gene names: NA
Gene position: 350323-350973 (Clockwise)
Preceding gene: 169627456
Following gene: 169627459
Centisome position: 6.91
GC content: 65.28
Gene sequence:
>651_bases ATGAGGACTGCCCGGACTGTGCTGACCTCGGTGGCGGCAGCCGCCTTTGGTCTGACAGCGACCCCGGCGGCGGGCGCGGT TCCGTCGGACCCGGGCGTCGTCAACTATGCGGTCCTCGCACGCGGATCGGTAAGCAATGTCATCGGCGCACAACTTGGTT CGCATAGCGAGTTCACGCAGCCGTTCCAGGCGTTCTCGGTGGACGTTCCGGACTGCAACAACTGGTCCGATATCGGCCTC GACGAGGTGTACGCGGATCCGGACCTGGCATCGTTCCGTGGGGCGACAACACAAGATTCCGCCACAGACGCAACACATTT GGTAAAACAGGCGATCGGGGTGTTCGCCAATAGCGACGCCGCCGACCGGGCCTACCATCGGGTGGTGGACCGCACCCGGG GATGCTCCGGACAGACGGCCACCTTGATACTGGACGACGGCCGGCGTGAGGTGTGGACATTCACCGGCCCGGCTGCCGGC GCCACGGATGCGGCCTGGATGAAGGAGGAGGCCGGCGTCGACCGCCGCTGCTTCAACCAGACCCGGCGGCGCGAGAACGT GCTACTGCAGGCCAAGGTCTGTCAGCCGGGTAATGGCAGCCTCGCCGTCAATGTGCTGGCCAACACCATGCAGAACGGCC TGGGTCAGTAA
Upstream 100 bases:
>100_bases GGGCGCGACAAGAGGTCATGTTCCAGGTGAAGGTGTGCTCGCCCCGCGACGCAGAGCGCGCTGCGACGCGTATTGCCGAT GCGATGGAGGCTGGTGTGTG
Downstream 100 bases:
>100_bases GGGGTAGCTATGGGGGGATTGCTTCTTTTTCTGGGGTTGATCGTCGTCCCGTTTTTGTTGTGGTCGATTTTTGATCCGAA GAGCCAGTGGCAGGTGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRTARTVLTSVAAAAFGLTATPAAGAVPSDPGVVNYAVLARGSVSNVIGAQLGSHSEFTQPFQAFSVDVPDCNNWSDIGL DEVYADPDLASFRGATTQDSATDATHLVKQAIGVFANSDAADRAYHRVVDRTRGCSGQTATLILDDGRREVWTFTGPAAG ATDAAWMKEEAGVDRRCFNQTRRRENVLLQAKVCQPGNGSLAVNVLANTMQNGLGQ
Sequences:
>Translated_216_residues MRTARTVLTSVAAAAFGLTATPAAGAVPSDPGVVNYAVLARGSVSNVIGAQLGSHSEFTQPFQAFSVDVPDCNNWSDIGL DEVYADPDLASFRGATTQDSATDATHLVKQAIGVFANSDAADRAYHRVVDRTRGCSGQTATLILDDGRREVWTFTGPAAG ATDAAWMKEEAGVDRRCFNQTRRRENVLLQAKVCQPGNGSLAVNVLANTMQNGLGQ >Mature_216_residues MRTARTVLTSVAAAAFGLTATPAAGAVPSDPGVVNYAVLARGSVSNVIGAQLGSHSEFTQPFQAFSVDVPDCNNWSDIGL DEVYADPDLASFRGATTQDSATDATHLVKQAIGVFANSDAADRAYHRVVDRTRGCSGQTATLILDDGRREVWTFTGPAAG ATDAAWMKEEAGVDRRCFNQTRRRENVLLQAKVCQPGNGSLAVNVLANTMQNGLGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22746; Mature: 22746
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTARTVLTSVAAAAFGLTATPAAGAVPSDPGVVNYAVLARGSVSNVIGAQLGSHSEFTQ CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHC PFQAFSVDVPDCNNWSDIGLDEVYADPDLASFRGATTQDSATDATHLVKQAIGVFANSDA CHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCH ADRAYHRVVDRTRGCSGQTATLILDDGRREVWTFTGPAAGATDAAWMKEEAGVDRRCFNQ HHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHH TRRRENVLLQAKVCQPGNGSLAVNVLANTMQNGLGQ HHHHHCEEEEEEECCCCCCCEEHHHHHHHHHHCCCC >Mature Secondary Structure MRTARTVLTSVAAAAFGLTATPAAGAVPSDPGVVNYAVLARGSVSNVIGAQLGSHSEFTQ CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHC PFQAFSVDVPDCNNWSDIGLDEVYADPDLASFRGATTQDSATDATHLVKQAIGVFANSDA CHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCH ADRAYHRVVDRTRGCSGQTATLILDDGRREVWTFTGPAAGATDAAWMKEEAGVDRRCFNQ HHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHH TRRRENVLLQAKVCQPGNGSLAVNVLANTMQNGLGQ HHHHHCEEEEEEECCCCCCCEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA