| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is katA [H]
Identifier: 169627455
GI number: 169627455
Start: 348158
End: 349621
Strand: Direct
Name: katA [H]
Synonym: MAB_0351
Alternate gene names: 169627455
Gene position: 348158-349621 (Clockwise)
Preceding gene: 169627454
Following gene: 169627456
Centisome position: 6.87
GC content: 61.75
Gene sequence:
>1464_bases ATGTCCAACCGCACCACAACGAATACCGGAATCGCGGTCGAGAGTGACGACGAGTCGCTGACCGCGGGTACGCAGGGCCC GGTGTTGCTGCATGACCATTACCTGATCGAGAAGCTTGCCCAGTTCAACCGGGAGCGGGTTCCCGAGCGCATCGTGCACG CCAAGGGCGCCGGGGCATACGGGGAGCTCGTGATCACCGCCGACGTCTCGAAGTACACCAAGGCGAAGTTGTTCCAGCCC GGAGCAAAAACCGAATCTTTGGCTCGCTTTTCGACTGTCGCCGGGGAGCAGGGCAGCCCCGATAGCTGGCGCGATCCGCG CGGATTCGCGGTCAAGTTCTACACCGAAGACGGCAACTACGATCTCGTCGGCAACAACACTCCGGTGTTTTTCATCCGCG ATGCCATTAAATTCCCGGACTTCATCCGTTCGCAGAAACGGCTGCCCGGTTCCGGGTTGCGTGACCACAACATGCAGTGG GATTTCTGGACGCTACGGCCCGAGACTGCGCATCAGGTCACCTGGCTGATGGGGGATCGCGGCATTCCGAAGACGTACCG GCACATGAACGGCTACGGCTCGCACACCTACCAGTGGATCAATGCCGAGGGCGAGCGCTTCTGGGTCAAATACCACTTCA AGACGGACCAGGGCCATGATTTCCTCACGCAGCAAGAAGCGGATGAGCTTGCGGGCTCGGACGCCGACGCGCATCGCCGC GATCTGTGGAATGCGATCGAGGACGGCAACTTCCCGAGCTGGACCCTGCACGTACAGGTCATGCCGGTGGACGAAGCGGC GGGATATCGGTTCAATCCCTTTGATCTGACCAAGGTTTGGTCAAAGAAGGACTACCCGCTGATCGAGGTCGGCAAGTGGA CGCTCAACCGCAACCCGCGCAACTACTTCGTGGAAATTGAGCAGGCGGCGTTCGAGCCTTCGAATATCGTGCCCGGGATC GGTTTTTCGCCGGACAAGATGCTGCTGGGCCGGGTGTTCGCCTATGCGGACGCACACCGATACCGCATCGGCACCAACTA TGCGCAGCTGCCGCCGAATGCGCCGCGCGCCGCAACGGTGAACTCCTATTCCAAGGAGGGGCCGATGCGCTACCACTTCA ACGATCCGGAAGTTCCCGTCTACGCGCCCAATTCCTTTGGCGGCCCGCACGCCGATCCAGAAGCTGCCGGTGACGGCGGC GTGTGGGAGTTCGACGGTACGGCAGTGCGCGCCGGGTACATCCAGCATGCGGAGGACGGCGACTTCGTGCAGGCGGGAAC GTTGGTGCGTGAGGTGCTCGACGACGAGCAGCGTGCGCGACTGGCGGGCAATATCGTCGGACACGTGTTGGACGGAGTCT CCGAGCCCGTGTTGTCCAGGGTCTTCGAGTACTGGAAGAACGTGGACCCCGAGCTGGGTAAGGCGGTTGAAGAGGGAGTT CGCGCAGGTCTGGACGCCAAGTAG
Upstream 100 bases:
>100_bases CGTACCGGGCTTATCTGGTGGTCGACGAGGTGGAAGTCGCCTTCGGGGACGTCTGTCCCCGGTGTCAGTCCAAGTAGTCC GCTAACGGAGAGGTTTTCTC
Downstream 100 bases:
>100_bases TCGGAGTGCGGTGAGGTGCCGGTTCCTTCGTTGGGGGACCGGCGTCTTCCGTATGCTCGTTGCATGTCCTACGGCGTACG TGTGCTCCTCGCGGCAGTTT
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MSNRTTTNTGIAVESDDESLTAGTQGPVLLHDHYLIEKLAQFNRERVPERIVHAKGAGAYGELVITADVSKYTKAKLFQP GAKTESLARFSTVAGEQGSPDSWRDPRGFAVKFYTEDGNYDLVGNNTPVFFIRDAIKFPDFIRSQKRLPGSGLRDHNMQW DFWTLRPETAHQVTWLMGDRGIPKTYRHMNGYGSHTYQWINAEGERFWVKYHFKTDQGHDFLTQQEADELAGSDADAHRR DLWNAIEDGNFPSWTLHVQVMPVDEAAGYRFNPFDLTKVWSKKDYPLIEVGKWTLNRNPRNYFVEIEQAAFEPSNIVPGI GFSPDKMLLGRVFAYADAHRYRIGTNYAQLPPNAPRAATVNSYSKEGPMRYHFNDPEVPVYAPNSFGGPHADPEAAGDGG VWEFDGTAVRAGYIQHAEDGDFVQAGTLVREVLDDEQRARLAGNIVGHVLDGVSEPVLSRVFEYWKNVDPELGKAVEEGV RAGLDAK
Sequences:
>Translated_487_residues MSNRTTTNTGIAVESDDESLTAGTQGPVLLHDHYLIEKLAQFNRERVPERIVHAKGAGAYGELVITADVSKYTKAKLFQP GAKTESLARFSTVAGEQGSPDSWRDPRGFAVKFYTEDGNYDLVGNNTPVFFIRDAIKFPDFIRSQKRLPGSGLRDHNMQW DFWTLRPETAHQVTWLMGDRGIPKTYRHMNGYGSHTYQWINAEGERFWVKYHFKTDQGHDFLTQQEADELAGSDADAHRR DLWNAIEDGNFPSWTLHVQVMPVDEAAGYRFNPFDLTKVWSKKDYPLIEVGKWTLNRNPRNYFVEIEQAAFEPSNIVPGI GFSPDKMLLGRVFAYADAHRYRIGTNYAQLPPNAPRAATVNSYSKEGPMRYHFNDPEVPVYAPNSFGGPHADPEAAGDGG VWEFDGTAVRAGYIQHAEDGDFVQAGTLVREVLDDEQRARLAGNIVGHVLDGVSEPVLSRVFEYWKNVDPELGKAVEEGV RAGLDAK >Mature_486_residues SNRTTTNTGIAVESDDESLTAGTQGPVLLHDHYLIEKLAQFNRERVPERIVHAKGAGAYGELVITADVSKYTKAKLFQPG AKTESLARFSTVAGEQGSPDSWRDPRGFAVKFYTEDGNYDLVGNNTPVFFIRDAIKFPDFIRSQKRLPGSGLRDHNMQWD FWTLRPETAHQVTWLMGDRGIPKTYRHMNGYGSHTYQWINAEGERFWVKYHFKTDQGHDFLTQQEADELAGSDADAHRRD LWNAIEDGNFPSWTLHVQVMPVDEAAGYRFNPFDLTKVWSKKDYPLIEVGKWTLNRNPRNYFVEIEQAAFEPSNIVPGIG FSPDKMLLGRVFAYADAHRYRIGTNYAQLPPNAPRAATVNSYSKEGPMRYHFNDPEVPVYAPNSFGGPHADPEAAGDGGV WEFDGTAVRAGYIQHAEDGDFVQAGTLVREVLDDEQRARLAGNIVGHVLDGVSEPVLSRVFEYWKNVDPELGKAVEEGVR AGLDAK
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=473, Percent_Identity=51.7970401691332, Blast_Score=490, Evalue=1e-138, Organism=Escherichia coli, GI48994891, Length=417, Percent_Identity=44.8441247002398, Blast_Score=338, Evalue=7e-94, Organism=Caenorhabditis elegans, GI71998444, Length=480, Percent_Identity=49.1666666666667, Blast_Score=465, Evalue=1e-131, Organism=Caenorhabditis elegans, GI25147792, Length=475, Percent_Identity=48.8421052631579, Blast_Score=454, Evalue=1e-128, Organism=Caenorhabditis elegans, GI25151141, Length=475, Percent_Identity=48.6315789473684, Blast_Score=452, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6320462, Length=487, Percent_Identity=44.9691991786448, Blast_Score=386, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6321525, Length=506, Percent_Identity=39.9209486166008, Blast_Score=345, Evalue=1e-95, Organism=Drosophila melanogaster, GI17981717, Length=483, Percent_Identity=49.0683229813665, Blast_Score=479, Evalue=1e-135, Organism=Drosophila melanogaster, GI19920968, Length=483, Percent_Identity=44.3064182194617, Blast_Score=431, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 54718; Mature: 54587
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRTTTNTGIAVESDDESLTAGTQGPVLLHDHYLIEKLAQFNRERVPERIVHAKGAGAY CCCCCCCCCCEEEECCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHCCCCCCC GELVITADVSKYTKAKLFQPGAKTESLARFSTVAGEQGSPDSWRDPRGFAVKFYTEDGNY EEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCE DLVGNNTPVFFIRDAIKFPDFIRSQKRLPGSGLRDHNMQWDFWTLRPETAHQVTWLMGDR EEECCCCCEEEEECHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCC GIPKTYRHMNGYGSHTYQWINAEGERFWVKYHFKTDQGHDFLTQQEADELAGSDADAHRR CCCHHHHHCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHH DLWNAIEDGNFPSWTLHVQVMPVDEAAGYRFNPFDLTKVWSKKDYPLIEVGKWTLNRNPR HHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEEECEEEECCCCC NYFVEIEQAAFEPSNIVPGIGFSPDKMLLGRVFAYADAHRYRIGTNYAQLPPNAPRAATV EEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCC NSYSKEGPMRYHFNDPEVPVYAPNSFGGPHADPEAAGDGGVWEFDGTAVRAGYIQHAEDG CCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEECEEEECCCC DFVQAGTLVREVLDDEQRARLAGNIVGHVLDGVSEPVLSRVFEYWKNVDPELGKAVEEGV CEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH RAGLDAK HCCCCCC >Mature Secondary Structure SNRTTTNTGIAVESDDESLTAGTQGPVLLHDHYLIEKLAQFNRERVPERIVHAKGAGAY CCCCCCCCCEEEECCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHCCCCCCC GELVITADVSKYTKAKLFQPGAKTESLARFSTVAGEQGSPDSWRDPRGFAVKFYTEDGNY EEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCE DLVGNNTPVFFIRDAIKFPDFIRSQKRLPGSGLRDHNMQWDFWTLRPETAHQVTWLMGDR EEECCCCCEEEEECHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCC GIPKTYRHMNGYGSHTYQWINAEGERFWVKYHFKTDQGHDFLTQQEADELAGSDADAHRR CCCHHHHHCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHH DLWNAIEDGNFPSWTLHVQVMPVDEAAGYRFNPFDLTKVWSKKDYPLIEVGKWTLNRNPR HHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEEECEEEECCCCC NYFVEIEQAAFEPSNIVPGIGFSPDKMLLGRVFAYADAHRYRIGTNYAQLPPNAPRAATV EEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCC NSYSKEGPMRYHFNDPEVPVYAPNSFGGPHADPEAAGDGGVWEFDGTAVRAGYIQHAEDG CCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEECEEEECCCC DFVQAGTLVREVLDDEQRARLAGNIVGHVLDGVSEPVLSRVFEYWKNVDPELGKAVEEGV CEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH RAGLDAK HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1426241; 12454454 [H]