| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is catD [H]
Identifier: 169627453
GI number: 169627453
Start: 346637
End: 347470
Strand: Reverse
Name: catD [H]
Synonym: MAB_0349c
Alternate gene names: 169627453
Gene position: 347470-346637 (Counterclockwise)
Preceding gene: 169627458
Following gene: 169627446
Centisome position: 6.86
GC content: 64.87
Gene sequence:
>834_bases ATGGGCAGCGCCGCATTGCAGGACCGATACCTCCAGAGCTGCCTCGGTGGGCTGCATGTGCGGATCGGAGGCGAAGGACC CGTCATCCTCTTTTGGCCCAGCCTCTTGATGACGGGATCGATGTGGGCCGCCCAGGCCGAATACTTCGCCGACCGCTACA CCGTGATCCTGGTCGACCCGCCCGGCCACGGCGACAGCCAGTCGCTCACCCGGATGTTCCGCTTCGAGGACTGCGCACAT GCCATCACACAGATCCTCGACTCCCTCGGTATCGAGCGCGCCCACGTCGTCGGCAATTCTTGGGGCGGGATGATCGGGGG GACCTTCACGGCCATGTACCCACACAGAGCGGGAGCGTCGGTGCTGATGAACGCCACCGCGTCGCGGGCAAGCATGCGCC AACGGGTCGAGTTTCGGCTGCTCACCGAGATTGTCCGGATTCTCGGCCGATTCCGTGAGCCGCTCACCACCCGTGCCGTC AAGGCCTTCGTCGGGCCCACCATCATGCGCGAGCGCCCGCACGTCGAGCAGTCCATCCGCGCGGAACTGCGCGATCTCAG GGTCGATTCGGTGTACTGGGCGGTCAACAGCGTTGTTCCGGCACGACCCGATCAACGCGAGCTGTTGGGTCGCATCACCA CACCGATTCTGGTGATCGCGGGACGCGAGGACCCAACCTTTCCGGTCGCCGAGACCGAGCTCATGGCCGAGGCGATTCCC GGCGCCGAATTGGTGATCATGGAGAACACGGGGCATCTCGCGGCGCTGGAGCGCCCCGAAGAGGTCAATGCCCTGATCGA CGACTTCCTCAAACGGCACCCGATCGAGGACTAA
Upstream 100 bases:
>100_bases GAACAGATGAGCAGCACTGGCGGTAGCAACCTGGCGGCGATCATGTCCACATTCTGTAGATCTTCCCTGTCAATCGTCCA CAGCCGCTAGCCTGCTGCGC
Downstream 100 bases:
>100_bases CCCACGAAATCCGCGACCAGGCGCAGCGCGAAGACGATCAGTACCGGCAATGCGATGAGCGGCAAGGCGGCCTCGGCAGC GGCCCGCGACCCGATGACCG
Product: putative hydrolase, alpha/beta fold
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MGSAALQDRYLQSCLGGLHVRIGGEGPVILFWPSLLMTGSMWAAQAEYFADRYTVILVDPPGHGDSQSLTRMFRFEDCAH AITQILDSLGIERAHVVGNSWGGMIGGTFTAMYPHRAGASVLMNATASRASMRQRVEFRLLTEIVRILGRFREPLTTRAV KAFVGPTIMRERPHVEQSIRAELRDLRVDSVYWAVNSVVPARPDQRELLGRITTPILVIAGREDPTFPVAETELMAEAIP GAELVIMENTGHLAALERPEEVNALIDDFLKRHPIED
Sequences:
>Translated_277_residues MGSAALQDRYLQSCLGGLHVRIGGEGPVILFWPSLLMTGSMWAAQAEYFADRYTVILVDPPGHGDSQSLTRMFRFEDCAH AITQILDSLGIERAHVVGNSWGGMIGGTFTAMYPHRAGASVLMNATASRASMRQRVEFRLLTEIVRILGRFREPLTTRAV KAFVGPTIMRERPHVEQSIRAELRDLRVDSVYWAVNSVVPARPDQRELLGRITTPILVIAGREDPTFPVAETELMAEAIP GAELVIMENTGHLAALERPEEVNALIDDFLKRHPIED >Mature_276_residues GSAALQDRYLQSCLGGLHVRIGGEGPVILFWPSLLMTGSMWAAQAEYFADRYTVILVDPPGHGDSQSLTRMFRFEDCAHA ITQILDSLGIERAHVVGNSWGGMIGGTFTAMYPHRAGASVLMNATASRASMRQRVEFRLLTEIVRILGRFREPLTTRAVK AFVGPTIMRERPHVEQSIRAELRDLRVDSVYWAVNSVVPARPDQRELLGRITTPILVIAGREDPTFPVAETELMAEAIPG AELVIMENTGHLAALERPEEVNALIDDFLKRHPIED
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081721, Length=227, Percent_Identity=29.5154185022026, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 30728; Mature: 30597
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSAALQDRYLQSCLGGLHVRIGGEGPVILFWPSLLMTGSMWAAQAEYFADRYTVILVDP CCCHHHHHHHHHHHHCCEEEEECCCCCEEEEECHHHHHCCHHHHHHHHHHCCEEEEEECC PGHGDSQSLTRMFRFEDCAHAITQILDSLGIERAHVVGNSWGGMIGGTFTAMYPHRAGAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCCCCH VLMNATASRASMRQRVEFRLLTEIVRILGRFREPLTTRAVKAFVGPTIMRERPHVEQSIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHCCCCCHHHHHH AELRDLRVDSVYWAVNSVVPARPDQRELLGRITTPILVIAGREDPTFPVAETELMAEAIP HHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCC GAELVIMENTGHLAALERPEEVNALIDDFLKRHPIED CCEEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GSAALQDRYLQSCLGGLHVRIGGEGPVILFWPSLLMTGSMWAAQAEYFADRYTVILVDP CCHHHHHHHHHHHHCCEEEEECCCCCEEEEECHHHHHCCHHHHHHHHHHCCEEEEEECC PGHGDSQSLTRMFRFEDCAHAITQILDSLGIERAHVVGNSWGGMIGGTFTAMYPHRAGAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCCCCH VLMNATASRASMRQRVEFRLLTEIVRILGRFREPLTTRAVKAFVGPTIMRERPHVEQSIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHCCCCCHHHHHH AELRDLRVDSVYWAVNSVVPARPDQRELLGRITTPILVIAGREDPTFPVAETELMAEAIP HHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCC GAELVIMENTGHLAALERPEEVNALIDDFLKRHPIED CCEEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]