| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627403
Identifier: 169627403
GI number: 169627403
Start: 301400
End: 302359
Strand: Direct
Name: 169627403
Synonym: MAB_0299
Alternate gene names: NA
Gene position: 301400-302359 (Clockwise)
Preceding gene: 169627402
Following gene: 169627405
Centisome position: 5.95
GC content: 63.96
Gene sequence:
>960_bases ATGACAAGTGTGCGCATCGACATTCACGCTCACCTGTGGTCCGATGAGTATCTTTCGCTGTTGGACGGCTACGGGCGTCC CGCCACCGATGTCCATCGTGGGCTCGGCGCAGGGGCCACGCGTGACGATCTGGATGGGCGTTTCGAGCTGATGGATGAGG CGGGGGTTGACTTGCAGATCCTCACCGCGACACCGGCATCGCCGCATTTCGAGGATCAGGCGGCGGCGGTGGCGAGCGCC CGTTTTATCAATGACGAGTACGCGAAGCTCTCGAGTGAGTATCCGGGGCGGTTCGGGGCGCTGGCGTCCTTGCCGCTGCC GCATGTGCCGGCTGCACTGGAGGAACTGGCACGGGCTATCGACGAACTGGGTATGTATGGCGCCTCGATCACCACCTCGG TGCTCGGTCGATCCATTGCCGATCCGATCTTCGATCCGTTGTATGCGGAGCTGAACCGCAGGCGGGCAGTCCTTTTCGTG CACCCCGCGGGGTGTGGCGCGGAATCGTCGCTGATCACCGACCACTCCCTGACGTGGTCTATCGGGGCGCCCATCGAGGA CACCGTCGCGATCATGCACCTCATTGTGGCGGGTGTTCCATCGCGGTATCCGGATATGAAGATCGTGACGTGTCACCTGG GCGGTGCGCTGCCGATGGTGTTGGAGCGTGCGCACCGACAGGTCACCGAGTGGGAGGCGACGCAGTGTCCGGAGGCGCCG AGGGATGCCGCCCGCCGGCTCTGGTACGACACCGTCGGGCATGACCACACGCCCGCACTGCGCGCGGCGGTTGCTTCGTT GGGGGTCGACCGGCTGATTTTCGGTTCGGACTTTCCGTACCAGGCAGGCCCCAGGTACGTCAGTTCCGCGACCTATATCG AAGAAGGCCTGTCGGCTGAGGATGCGTCGGCGATCCTGGACCACAACGGCGCCGAGTTGTTGGGATTGACCGGTGTTTAG
Upstream 100 bases:
>100_bases CCTCGATTCAGTTCCATGCTGAGTCGATCTTGACCCGCGACGGGGTGGGGATATTCGCTGAGCTGCTCACACCGCTGGCA ACGGGCGTTCCGGTACTAGC
Downstream 100 bases:
>100_bases CGGCCCGCGCTGACGCCGTCGATAATCAGGTCGACGAGTTCGTCCAGCGCGAGGTCATCTGCTGTTTGGCCTAGATGTGC GGCCCACAGGTGTACGTAGC
Product: putative amidohydrolase (aminocarboxymuconate-semialdehyde decarboxylase)
Products: NA
Alternate protein names: Amidohydrolase; Amidohydrolase/Decarboxylase; Amidohydrolase Family Protein; Metal-Dependent Hydrolase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; O-Pyrocatechuate Decarboxylase; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; Tryptophan 2 3-Dioxygenase; Decarboxylase; Hydrolase; 2 3-Dihydroxybenzoic Acid Decarboxylase; Amidohydrolase Family; 4-Oxalomesaconate Hydratase; Amidase; 5-Carboxyvanillate Decarboxylase; Twin-Arginine Translocation Pathway Signal; Amidohydrolase 2 Family Protein; Metal Dependent Hydrolase; 5-Carboxy-2-Hydroxymuconate-6-Semialdehyde Decarboxylase
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTSVRIDIHAHLWSDEYLSLLDGYGRPATDVHRGLGAGATRDDLDGRFELMDEAGVDLQILTATPASPHFEDQAAAVASA RFINDEYAKLSSEYPGRFGALASLPLPHVPAALEELARAIDELGMYGASITTSVLGRSIADPIFDPLYAELNRRRAVLFV HPAGCGAESSLITDHSLTWSIGAPIEDTVAIMHLIVAGVPSRYPDMKIVTCHLGGALPMVLERAHRQVTEWEATQCPEAP RDAARRLWYDTVGHDHTPALRAAVASLGVDRLIFGSDFPYQAGPRYVSSATYIEEGLSAEDASAILDHNGAELLGLTGV
Sequences:
>Translated_319_residues MTSVRIDIHAHLWSDEYLSLLDGYGRPATDVHRGLGAGATRDDLDGRFELMDEAGVDLQILTATPASPHFEDQAAAVASA RFINDEYAKLSSEYPGRFGALASLPLPHVPAALEELARAIDELGMYGASITTSVLGRSIADPIFDPLYAELNRRRAVLFV HPAGCGAESSLITDHSLTWSIGAPIEDTVAIMHLIVAGVPSRYPDMKIVTCHLGGALPMVLERAHRQVTEWEATQCPEAP RDAARRLWYDTVGHDHTPALRAAVASLGVDRLIFGSDFPYQAGPRYVSSATYIEEGLSAEDASAILDHNGAELLGLTGV >Mature_318_residues TSVRIDIHAHLWSDEYLSLLDGYGRPATDVHRGLGAGATRDDLDGRFELMDEAGVDLQILTATPASPHFEDQAAAVASAR FINDEYAKLSSEYPGRFGALASLPLPHVPAALEELARAIDELGMYGASITTSVLGRSIADPIFDPLYAELNRRRAVLFVH PAGCGAESSLITDHSLTWSIGAPIEDTVAIMHLIVAGVPSRYPDMKIVTCHLGGALPMVLERAHRQVTEWEATQCPEAPR DAARRLWYDTVGHDHTPALRAAVASLGVDRLIFGSDFPYQAGPRYVSSATYIEEGLSAEDASAILDHNGAELLGLTGV
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI109715856, Length=332, Percent_Identity=27.1084337349398, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71995651, Length=334, Percent_Identity=25.4491017964072, Blast_Score=118, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71995655, Length=382, Percent_Identity=22.2513089005236, Blast_Score=92, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34337; Mature: 34206
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVRIDIHAHLWSDEYLSLLDGYGRPATDVHRGLGAGATRDDLDGRFELMDEAGVDLQI CCEEEEEEEEEECCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCEEEHHCCCCCEEE LTATPASPHFEDQAAAVASARFINDEYAKLSSEYPGRFGALASLPLPHVPAALEELARAI EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHH DELGMYGASITTSVLGRSIADPIFDPLYAELNRRRAVLFVHPAGCGAESSLITDHSLTWS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCEEEE IGAPIEDTVAIMHLIVAGVPSRYPDMKIVTCHLGGALPMVLERAHRQVTEWEATQCPEAP ECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCH RDAARRLWYDTVGHDHTPALRAAVASLGVDRLIFGSDFPYQAGPRYVSSATYIEEGLSAE HHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCC DASAILDHNGAELLGLTGV HHHHHHCCCCCEEEEECCC >Mature Secondary Structure TSVRIDIHAHLWSDEYLSLLDGYGRPATDVHRGLGAGATRDDLDGRFELMDEAGVDLQI CEEEEEEEEEECCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCEEEHHCCCCCEEE LTATPASPHFEDQAAAVASARFINDEYAKLSSEYPGRFGALASLPLPHVPAALEELARAI EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHH DELGMYGASITTSVLGRSIADPIFDPLYAELNRRRAVLFVHPAGCGAESSLITDHSLTWS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCEEEE IGAPIEDTVAIMHLIVAGVPSRYPDMKIVTCHLGGALPMVLERAHRQVTEWEATQCPEAP ECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCH RDAARRLWYDTVGHDHTPALRAAVASLGVDRLIFGSDFPYQAGPRYVSSATYIEEGLSAE HHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCC DASAILDHNGAELLGLTGV HHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA