| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627376
Identifier: 169627376
GI number: 169627376
Start: 270714
End: 271286
Strand: Direct
Name: 169627376
Synonym: MAB_0271
Alternate gene names: NA
Gene position: 270714-271286 (Clockwise)
Preceding gene: 169627373
Following gene: 169627377
Centisome position: 5.34
GC content: 57.24
Gene sequence:
>573_bases ATGATTCCTGAGCTAACGGCTGATGGGCACCTACCGCCGGGACGGTATCGCGTCACCCTGGAAGCTATTCGAGACCGCTT TGTCGCTCATGAAGACTTTGCGGGAAGCAGCAGTCGAGCGAGGCTGTTTGGCGGACTCGTCGAGTACCTCATCGCTTGGG AGGACGTTCAAGCGATGACATCCGCTAACGGTCGGATTCTTAAGTCGCTGTGGCTCGCTGGGAGCTTCACATCAAGTGTC GTTGATCCACGTGACGTCGACGCGACGCCGATAGTGAACGGTGTGGTTGCTGATTCCGTGGTGGGCCGTCCAGGGTCTAA AGGCATCAAGCGGCTGATACAGCACCGCGACTCCATCAAGGCGCGGTATGGGGTTGAGATATTCCCCGTGAGATGGCATC CTATCGAACATCCGTTCGATCCAAAGGTGGACCTGACTGGCGACGAGGCTGCATACTTATCTGATCGCGGGAAGATGGAC GACTGGTGGCAGCGGTGTCGTGTCAACGGTGAAGATGCCCCAACTGCGGCGAGCTGTGAAACGCGAAGAGGTTATCTGGA GGTGATCGCATGA
Upstream 100 bases:
>100_bases ATCCGAGGGTCGATGGCGCTTGGTTCCAAATAGACTCAGGTCATGTGGCTCTTTGAAGGGGCTAGGGGGTTCTGTTGGCA AAGACCTGGCGTTGGCGCGG
Downstream 100 bases:
>100_bases GTTTGCGCGATCGGTTTCCGGAGATCGCTGCGCGGTACAGCCGCGATCCCGAACTCGATGGAGTCGACGGCGAGCCCGCG TCGAGTTACCTACGTGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MIPELTADGHLPPGRYRVTLEAIRDRFVAHEDFAGSSSRARLFGGLVEYLIAWEDVQAMTSANGRILKSLWLAGSFTSSV VDPRDVDATPIVNGVVADSVVGRPGSKGIKRLIQHRDSIKARYGVEIFPVRWHPIEHPFDPKVDLTGDEAAYLSDRGKMD DWWQRCRVNGEDAPTAASCETRRGYLEVIA
Sequences:
>Translated_190_residues MIPELTADGHLPPGRYRVTLEAIRDRFVAHEDFAGSSSRARLFGGLVEYLIAWEDVQAMTSANGRILKSLWLAGSFTSSV VDPRDVDATPIVNGVVADSVVGRPGSKGIKRLIQHRDSIKARYGVEIFPVRWHPIEHPFDPKVDLTGDEAAYLSDRGKMD DWWQRCRVNGEDAPTAASCETRRGYLEVIA >Mature_190_residues MIPELTADGHLPPGRYRVTLEAIRDRFVAHEDFAGSSSRARLFGGLVEYLIAWEDVQAMTSANGRILKSLWLAGSFTSSV VDPRDVDATPIVNGVVADSVVGRPGSKGIKRLIQHRDSIKARYGVEIFPVRWHPIEHPFDPKVDLTGDEAAYLSDRGKMD DWWQRCRVNGEDAPTAASCETRRGYLEVIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21105; Mature: 21105
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPELTADGHLPPGRYRVTLEAIRDRFVAHEDFAGSSSRARLFGGLVEYLIAWEDVQAMT CCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SANGRILKSLWLAGSFTSSVVDPRDVDATPIVNGVVADSVVGRPGSKGIKRLIQHRDSIK CCCCHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC ARYGVEIFPVRWHPIEHPFDPKVDLTGDEAAYLSDRGKMDDWWQRCRVNGEDAPTAASCE HHCCCEEEEEEECCCCCCCCCCEECCCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCH TRRGYLEVIA HCCCEEEECC >Mature Secondary Structure MIPELTADGHLPPGRYRVTLEAIRDRFVAHEDFAGSSSRARLFGGLVEYLIAWEDVQAMT CCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SANGRILKSLWLAGSFTSSVVDPRDVDATPIVNGVVADSVVGRPGSKGIKRLIQHRDSIK CCCCHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC ARYGVEIFPVRWHPIEHPFDPKVDLTGDEAAYLSDRGKMDDWWQRCRVNGEDAPTAASCE HHCCCEEEEEEECCCCCCCCCCEECCCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCH TRRGYLEVIA HCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA