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The map label for this gene is osmF [H]

Identifier: 169627366

GI number: 169627366

Start: 263053

End: 263985

Strand: Direct

Name: osmF [H]

Synonym: MAB_0261

Alternate gene names: 169627366

Gene position: 263053-263985 (Clockwise)

Preceding gene: 169627365

Following gene: 169627367

Centisome position: 5.19

GC content: 62.7

Gene sequence:

>933_bases
ATGCGCAGGGCCGCACAACTGCTCGTTGCCGTCATGGCGGCGATTTTCTTCAGCGGCTGCGGCAGCGCCAATCCCCTGGG
CGGAGGCCCCCTTTCGGGTAATCTGAATACGCTGATCGTCGGCTCCGCGGACTTCCCCGAATCGAAGACCGTCGCCGAGC
TATACGCGCAGATACTGCAGATCAACGGCTTTGACGTCACCAGGCAGTTGGGTATCGGTAGCCGTGAAACGTATATCCCG
GCGGTCAAGGACCATTCGATCGACCTCATTGCCGACTACACCGGAAATCTACTGCGCTACTTTGACCCGGAGGCCACCGC
TACCAAGCCCGATGAAGTCGAGCTCGCGCTGCTACGCAAGCTCGACGGCGATCTGGACATCTTGTCGCCCTCGCCGGCCG
CTGATGCCGACACGCTATGCGTCACCAGGGCCACCGCGGAGAAGTGGAATCTGCGCTCGATCGGCGACCTGGCGGCGCAC
TCGGCGGAGGTCACGGTCGGCGCGCCCTCGGAATTCCTGCACCGCAGTGTCGGGCTGGCGGGGCTCAAGGCCAATTATGG
ACTGGATATCCCGGAATCGCGGTTCGTCGCCATCAGCGATGGCGGCGGACCGGCGACGGTCAAGGCGCTGGTGGATGGGA
CCATCACCACGGCCAACATCTTCAGCACCTCACCGGCCATTGCCGAGCACGATCTGGTGGTCTTGGACGATCCCAAGTTC
ACGTTCCCGGCCGGCAATCTGGTGCCGTTGGTCAACGCGCAGAAGAAATCCGAGAAATTGAAGAAGGTGCTGGACGCGCT
CTCGGCGCGACTGACCACGGCGGACCTCACCGGCCTCAATGCCGCAGTGTCCGGCAACAACGGAGTCGACCCCAAGGAAG
CAGCACAGAAATGGTTGACGGACAAGGGCTTCGACAAACCCGTGGGGGCGTGA

Upstream 100 bases:

>100_bases
GGGTGAGAGTCCCGGATCGGTCAGGCCATCTGGTTAGCCACCGGAATCTTCCTGACGGTAAAGGCGGGCAGGTCGGCGGA
TGCCCGGCTACTGTCGAGGA

Downstream 100 bases:

>100_bases
CCGCTTGATTACCTTCGAAAACGTCACCAAGCAGTACCCGGACGGGACCACTGCGGTCGACGATCTCAACATGCATGTGG
ACAAGGGATCGTTCACTGTG

Product: amino acid ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRRAAQLLVAVMAAIFFSGCGSANPLGGGPLSGNLNTLIVGSADFPESKTVAELYAQILQINGFDVTRQLGIGSRETYIP
AVKDHSIDLIADYTGNLLRYFDPEATATKPDEVELALLRKLDGDLDILSPSPAADADTLCVTRATAEKWNLRSIGDLAAH
SAEVTVGAPSEFLHRSVGLAGLKANYGLDIPESRFVAISDGGGPATVKALVDGTITTANIFSTSPAIAEHDLVVLDDPKF
TFPAGNLVPLVNAQKKSEKLKKVLDALSARLTTADLTGLNAAVSGNNGVDPKEAAQKWLTDKGFDKPVGA

Sequences:

>Translated_310_residues
MRRAAQLLVAVMAAIFFSGCGSANPLGGGPLSGNLNTLIVGSADFPESKTVAELYAQILQINGFDVTRQLGIGSRETYIP
AVKDHSIDLIADYTGNLLRYFDPEATATKPDEVELALLRKLDGDLDILSPSPAADADTLCVTRATAEKWNLRSIGDLAAH
SAEVTVGAPSEFLHRSVGLAGLKANYGLDIPESRFVAISDGGGPATVKALVDGTITTANIFSTSPAIAEHDLVVLDDPKF
TFPAGNLVPLVNAQKKSEKLKKVLDALSARLTTADLTGLNAAVSGNNGVDPKEAAQKWLTDKGFDKPVGA
>Mature_310_residues
MRRAAQLLVAVMAAIFFSGCGSANPLGGGPLSGNLNTLIVGSADFPESKTVAELYAQILQINGFDVTRQLGIGSRETYIP
AVKDHSIDLIADYTGNLLRYFDPEATATKPDEVELALLRKLDGDLDILSPSPAADADTLCVTRATAEKWNLRSIGDLAAH
SAEVTVGAPSEFLHRSVGLAGLKANYGLDIPESRFVAISDGGGPATVKALVDGTITTANIFSTSPAIAEHDLVVLDDPKF
TFPAGNLVPLVNAQKKSEKLKKVLDALSARLTTADLTGLNAAVSGNNGVDPKEAAQKWLTDKGFDKPVGA

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=278, Percent_Identity=26.2589928057554, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32468; Mature: 32468

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAAQLLVAVMAAIFFSGCGSANPLGGGPLSGNLNTLIVGSADFPESKTVAELYAQILQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
INGFDVTRQLGIGSRETYIPAVKDHSIDLIADYTGNLLRYFDPEATATKPDEVELALLRK
CCCCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHH
LDGDLDILSPSPAADADTLCVTRATAEKWNLRSIGDLAAHSAEVTVGAPSEFLHRSVGLA
CCCCEEEECCCCCCCCCCEEEEECHHCCCCCCHHHHHHHCCCEEEECCCHHHHHHHCCCC
GLKANYGLDIPESRFVAISDGGGPATVKALVDGTITTANIFSTSPAIAEHDLVVLDDPKF
EEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCCEEEECCCCE
TFPAGNLVPLVNAQKKSEKLKKVLDALSARLTTADLTGLNAAVSGNNGVDPKEAAQKWLT
ECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHC
DKGFDKPVGA
CCCCCCCCCC
>Mature Secondary Structure
MRRAAQLLVAVMAAIFFSGCGSANPLGGGPLSGNLNTLIVGSADFPESKTVAELYAQILQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
INGFDVTRQLGIGSRETYIPAVKDHSIDLIADYTGNLLRYFDPEATATKPDEVELALLRK
CCCCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHH
LDGDLDILSPSPAADADTLCVTRATAEKWNLRSIGDLAAHSAEVTVGAPSEFLHRSVGLA
CCCCEEEECCCCCCCCCCEEEEECHHCCCCCCHHHHHHHCCCEEEECCCHHHHHHHCCCC
GLKANYGLDIPESRFVAISDGGGPATVKALVDGTITTANIFSTSPAIAEHDLVVLDDPKF
EEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCCEEEECCCCE
TFPAGNLVPLVNAQKKSEKLKKVLDALSARLTTADLTGLNAAVSGNNGVDPKEAAQKWLT
ECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHC
DKGFDKPVGA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]