| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627336
Identifier: 169627336
GI number: 169627336
Start: 238662
End: 239084
Strand: Direct
Name: 169627336
Synonym: MAB_0231
Alternate gene names: NA
Gene position: 238662-239084 (Clockwise)
Preceding gene: 169627335
Following gene: 169627337
Centisome position: 4.71
GC content: 64.78
Gene sequence:
>423_bases GTGGGGCCACAAGAGGATCGGCTTGCAGCTGCCCGTGATCAGGCAGCGCAGGCGAAAGCTCAAGCGTTGCAGGATCAGCC GTGGTCCACGTTGTGTGATGTCTACGCGAGTGAGGGGGGTGTGGTGGCAGTGCCCACCCCCGCCGCGTCGGAGTTGATGG GTCGGCGGATGGCGTTCGACATGCTGGCATCCTCGGGTACCGCCGAGGACGTGCACCGCGTGTTCTACGAGTACGTCTCG ATTGTGGGTTCGCCCGCGTATGTGCTGCCGGTAGTGACCGGGGCGCTGATGGTGCTGGCGATAGAGATCTGCCAGGCCAT GATTGGCGAGCTGGAGAACAAGAGCGACCCCGACCAGCGCATCCATCTGGCCGACGCCGCGCGCATCGCGTGGTCTCTGC GGCTTGAGGGGGGCTCCATTTGA
Upstream 100 bases:
>100_bases ATGCGGACGCCGAAGCACTGCAGACCATCGCAGTCACCATCGCCGACATACACGCGGGCATCGCAACCGCCCTGGCCCGG ACAGAGGAGGAGGTGTGAGG
Downstream 100 bases:
>100_bases AGGATCTGCCCGACTTCGGCGACTACCTTGACGAACACGGGAATCTGCGTGTGCCTCCCCGCTACGCGAGGTACTTGGAG AACCGGGCGGAGATAACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MGPQEDRLAAARDQAAQAKAQALQDQPWSTLCDVYASEGGVVAVPTPAASELMGRRMAFDMLASSGTAEDVHRVFYEYVS IVGSPAYVLPVVTGALMVLAIEICQAMIGELENKSDPDQRIHLADAARIAWSLRLEGGSI
Sequences:
>Translated_140_residues MGPQEDRLAAARDQAAQAKAQALQDQPWSTLCDVYASEGGVVAVPTPAASELMGRRMAFDMLASSGTAEDVHRVFYEYVS IVGSPAYVLPVVTGALMVLAIEICQAMIGELENKSDPDQRIHLADAARIAWSLRLEGGSI >Mature_139_residues GPQEDRLAAARDQAAQAKAQALQDQPWSTLCDVYASEGGVVAVPTPAASELMGRRMAFDMLASSGTAEDVHRVFYEYVSI VGSPAYVLPVVTGALMVLAIEICQAMIGELENKSDPDQRIHLADAARIAWSLRLEGGSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14948; Mature: 14817
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPQEDRLAAARDQAAQAKAQALQDQPWSTLCDVYASEGGVVAVPTPAASELMGRRMAFD CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH MLASSGTAEDVHRVFYEYVSIVGSPAYVLPVVTGALMVLAIEICQAMIGELENKSDPDQR HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IHLADAARIAWSLRLEGGSI HHHHHHHHHHHEEEECCCCC >Mature Secondary Structure GPQEDRLAAARDQAAQAKAQALQDQPWSTLCDVYASEGGVVAVPTPAASELMGRRMAFD CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH MLASSGTAEDVHRVFYEYVSIVGSPAYVLPVVTGALMVLAIEICQAMIGELENKSDPDQR HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IHLADAARIAWSLRLEGGSI HHHHHHHHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA