| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627331
Identifier: 169627331
GI number: 169627331
Start: 236137
End: 236853
Strand: Direct
Name: 169627331
Synonym: MAB_0226
Alternate gene names: NA
Gene position: 236137-236853 (Clockwise)
Preceding gene: 169627330
Following gene: 169627332
Centisome position: 4.66
GC content: 61.23
Gene sequence:
>717_bases ATGAGTGTAAGCACCGGGTACGACGAGCGGCAAGCGCTCTGCTGCGAGTGCGGGAACCTGCGCAGCTGCCGTCGACCCAA AAACTATCGTGAAGAGAACTTCTGGCTGAACCGACCAGTGGACCGAAGCTGGCACCGGGAAACCGGTGACCTCAAATGCG AGCACTGCGCGCGGACTACTCGGCACGCCCTCCTCTACCGGGAAGGTGACGGCTTCAAGGATCACGCCGAGCGGCTGGAG CGGATCGCGCTCGGAGGCAGTGACCCGCTCGATGCGGAATCGTCGGGCGTCACCGAGCAGATCAAGAAGAACTACCGGAT CGGGCGCCAGACCAACCCCCACCTACGTCACTCGTGGTGGACCGGTGACGCCGATCAGGCGCGGGCGCTGGGTACGTCCA CGGTCGTCACTCTTTGCGGCGACAAGTATGAAATACCCGACAACCCAGTGGCATACGACGACGATGAAGACGAGATCGGC CCCGCCCAGACTCGCGCCGCCCAGTACCACCGGCAGATCTTTTCCGATGATTCCCCACCCGAGGGATGGGACTATCAGGA CTGCCCAGACTGCACGCGCGTAGTCAATGAATGGGTCATAGAACGCAATCGCAACTACTTGATGGCCAAGCTCACCAAGT TGATGCGCACCGCCTTTGATCTGAATGCACCTGCGCTGGAGCGCCTTATCGCAGTCGTTGAGCAGGCGGAGCTATGA
Upstream 100 bases:
>100_bases CACCGGACCTACGCCCGGAAAAAGAACTGCCCCCGACCAGCACCGCCAAGCACCAGGTCGAGGGCAACCAACCAATTCCA TTGAGAGGAATCGATCTCTA
Downstream 100 bases:
>100_bases CGAACTTAGGCAGCATGCCCACACAGGCTCTTCATGATGAGTTGTTCAAACGCATCATCGCGAACTACGAGCACGCCAAG ATCCCTTGCCAATACAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSVSTGYDERQALCCECGNLRSCRRPKNYREENFWLNRPVDRSWHRETGDLKCEHCARTTRHALLYREGDGFKDHAERLE RIALGGSDPLDAESSGVTEQIKKNYRIGRQTNPHLRHSWWTGDADQARALGTSTVVTLCGDKYEIPDNPVAYDDDEDEIG PAQTRAAQYHRQIFSDDSPPEGWDYQDCPDCTRVVNEWVIERNRNYLMAKLTKLMRTAFDLNAPALERLIAVVEQAEL
Sequences:
>Translated_238_residues MSVSTGYDERQALCCECGNLRSCRRPKNYREENFWLNRPVDRSWHRETGDLKCEHCARTTRHALLYREGDGFKDHAERLE RIALGGSDPLDAESSGVTEQIKKNYRIGRQTNPHLRHSWWTGDADQARALGTSTVVTLCGDKYEIPDNPVAYDDDEDEIG PAQTRAAQYHRQIFSDDSPPEGWDYQDCPDCTRVVNEWVIERNRNYLMAKLTKLMRTAFDLNAPALERLIAVVEQAEL >Mature_237_residues SVSTGYDERQALCCECGNLRSCRRPKNYREENFWLNRPVDRSWHRETGDLKCEHCARTTRHALLYREGDGFKDHAERLER IALGGSDPLDAESSGVTEQIKKNYRIGRQTNPHLRHSWWTGDADQARALGTSTVVTLCGDKYEIPDNPVAYDDDEDEIGP AQTRAAQYHRQIFSDDSPPEGWDYQDCPDCTRVVNEWVIERNRNYLMAKLTKLMRTAFDLNAPALERLIAVVEQAEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27393; Mature: 27261
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSTGYDERQALCCECGNLRSCRRPKNYREENFWLNRPVDRSWHRETGDLKCEHCARTT CCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RHALLYREGDGFKDHAERLERIALGGSDPLDAESSGVTEQIKKNYRIGRQTNPHLRHSWW HHHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC TGDADQARALGTSTVVTLCGDKYEIPDNPVAYDDDEDEIGPAQTRAAQYHRQIFSDDSPP CCCHHHHHHHCCHHEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC EGWDYQDCPDCTRVVNEWVIERNRNYLMAKLTKLMRTAFDLNAPALERLIAVVEQAEL CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SVSTGYDERQALCCECGNLRSCRRPKNYREENFWLNRPVDRSWHRETGDLKCEHCARTT CCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RHALLYREGDGFKDHAERLERIALGGSDPLDAESSGVTEQIKKNYRIGRQTNPHLRHSWW HHHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC TGDADQARALGTSTVVTLCGDKYEIPDNPVAYDDDEDEIGPAQTRAAQYHRQIFSDDSPP CCCHHHHHHHCCHHEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC EGWDYQDCPDCTRVVNEWVIERNRNYLMAKLTKLMRTAFDLNAPALERLIAVVEQAEL CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA