| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627327
Identifier: 169627327
GI number: 169627327
Start: 234777
End: 235388
Strand: Reverse
Name: 169627327
Synonym: MAB_0222c
Alternate gene names: NA
Gene position: 235388-234777 (Counterclockwise)
Preceding gene: 169627350
Following gene: 169627326
Centisome position: 4.65
GC content: 59.31
Gene sequence:
>612_bases GTGAAGAATGAGCGAGACGACGACTGGGCCGCCGAACTGGTGAAGCGTGTCGGCAAGGCCATGAAGGATGCGCGAAACGG GCGATCCGCCACATGGCTAAGCGATCGGACAGCAGAACTTGGCTACCGGGTACCCGCCACAGTTATCTCCAAGCTGGACT CGGGCCACCGAGGCAGCGTGCTTGGGGTTGCAGAGCTGGTCGTGTTGGCCGCTGCACTGGATATGCCACCGGTCGCATTG CTGTATCCCGCACTCCCAGATGGAGAAGTAGACCTCTTGCCGGGGGAGCCCGTTCGGTCATTGAATGCAGTGGAGTGGTT TTCGGGACACACACCGCGGTCAGGGATTGGCAGCGCGGGTGCCATCGATCCGTCACGCATGGATGCCGAACTATCCAACT TGCGGCGACTTCAGTTGTCCCGCAATCGAGAAACGATGCAGAAGACGATTCGCACTGCGATGAGCAGTGAGCGGATTTCG CAGGAGTTCGTTGAGGGCGGCGCAACCGATGCCAACCCCCAGGCAATCCGGTCGCTCATTGAGATCTATCAAGAAAGAAT GGAGCGGATGGAGTCTGAAATGTCCGCTCGGGGGTGGAATCTCGATGCCTAG
Upstream 100 bases:
>100_bases TCCATTCGTGACACGCAGAGAATGCTGTGGAATGTTGCGTGACACGTATGACGGTACACCTAAATTCGACAGGCGCATAG AATCGGTGGATACTCGGCGC
Downstream 100 bases:
>100_bases GGAACGGCTTCGACCTGGCGAGCACGGTCGCATCACCGAACGATCCTCTGGTGGTAAGTATTTCGCCGTCACCTACGTCC GTGATCATGACGGTAAACGT
Product: putative DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKNERDDDWAAELVKRVGKAMKDARNGRSATWLSDRTAELGYRVPATVISKLDSGHRGSVLGVAELVVLAAALDMPPVAL LYPALPDGEVDLLPGEPVRSLNAVEWFSGHTPRSGIGSAGAIDPSRMDAELSNLRRLQLSRNRETMQKTIRTAMSSERIS QEFVEGGATDANPQAIRSLIEIYQERMERMESEMSARGWNLDA
Sequences:
>Translated_203_residues MKNERDDDWAAELVKRVGKAMKDARNGRSATWLSDRTAELGYRVPATVISKLDSGHRGSVLGVAELVVLAAALDMPPVAL LYPALPDGEVDLLPGEPVRSLNAVEWFSGHTPRSGIGSAGAIDPSRMDAELSNLRRLQLSRNRETMQKTIRTAMSSERIS QEFVEGGATDANPQAIRSLIEIYQERMERMESEMSARGWNLDA >Mature_203_residues MKNERDDDWAAELVKRVGKAMKDARNGRSATWLSDRTAELGYRVPATVISKLDSGHRGSVLGVAELVVLAAALDMPPVAL LYPALPDGEVDLLPGEPVRSLNAVEWFSGHTPRSGIGSAGAIDPSRMDAELSNLRRLQLSRNRETMQKTIRTAMSSERIS QEFVEGGATDANPQAIRSLIEIYQERMERMESEMSARGWNLDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22321; Mature: 22321
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNERDDDWAAELVKRVGKAMKDARNGRSATWLSDRTAELGYRVPATVISKLDSGHRGSV CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCH LGVAELVVLAAALDMPPVALLYPALPDGEVDLLPGEPVRSLNAVEWFSGHTPRSGIGSAG HHHHHHHHHHHHHCCCCHHHHCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC AIDPSRMDAELSNLRRLQLSRNRETMQKTIRTAMSSERISQEFVEGGATDANPQAIRSLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EIYQERMERMESEMSARGWNLDA HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKNERDDDWAAELVKRVGKAMKDARNGRSATWLSDRTAELGYRVPATVISKLDSGHRGSV CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCH LGVAELVVLAAALDMPPVALLYPALPDGEVDLLPGEPVRSLNAVEWFSGHTPRSGIGSAG HHHHHHHHHHHHHCCCCHHHHCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC AIDPSRMDAELSNLRRLQLSRNRETMQKTIRTAMSSERISQEFVEGGATDANPQAIRSLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EIYQERMERMESEMSARGWNLDA HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA