| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627324
Identifier: 169627324
GI number: 169627324
Start: 230893
End: 232164
Strand: Direct
Name: 169627324
Synonym: MAB_0219
Alternate gene names: NA
Gene position: 230893-232164 (Clockwise)
Preceding gene: 169627321
Following gene: 169627328
Centisome position: 4.56
GC content: 66.35
Gene sequence:
>1272_bases ATGACCACTCATTCTTTGCTATCGCTCGTCGAATGGCCGTCGGCCCGCATCACGGGCAGCCGTCGCCGCTCGAACGCCGA GGTGTTGCCGCGCCGTTTGACGAGGTACCGCGGCGGCACCTATTCGTCCACTGTGGACGAGGTTGTGTTCACCGACGGAA CTTCTGCTCGCACAGATTTAATTCGCCTGAACCCGACGATCACCGCGTACTCGCTCGATATCGCCGGGATCGCCCCCAAC CTGCCGTCCGGCTACGCGGTGGCGGATTGGCTGTCGGTGGCCAACCTGCGGGCACGCACCCGCGAATCGCAGGTGGCCTG GATCTTGGCCAACTCCTTTCCGGCGCTCTCCACGGCGCGGCTGAGCCGCCGGCTGCGCGCGGCCGGATATCTGGGTGAGG CCAACATCAAGGACCACGAGGCGATCGCCGGAACCCAGGCGGCCATCTGGTTCCTCACCAACGGGGTGGAGCTGGATACC GCAGCACGCAATGTGCCGACGGCAACGCGAAAGTCGCCGTCGTTCATCGAGTTTGAATTCCCGGAGCGGCCACAGTTGGG CGGCTTGACGATCCGCACCGGCGTGGGGCAGCAGCCAGCGGATGTCCGGCTGCACGCGTCCGTGAACGGTGCCGTGTGGC GTGAGGTCTCCTCCTCGGAGCTGAGCTTGTCGGCTGGTGCCGCACAGTACGCCAAGGTATTGGGTGTGGGTGCGACGGTC GCCGAAACCCAGTACGGCGCACCGGATCGCGGCTACCGGTTCTATCGCCTTTACGTGCAGGGTGGCACTGCCGACGTTGA GACCGTCGAGTTCTGGTTGCATGACGCGCGCAACCACCGCAACGCCGACCGTGTCGTTCAGCTGTACCGGTACCTGCTGG AGCAGTCGCTACTCGCCGCCGGTCAGGCGGAACACGCGCCCACCATCGATGACTCGCAGGCGGTGATGGCCGCGGGCCTG ATGGGGCCGTTCGTGGTGGACTCGCAGCGTCCCGTGGTGCTTTCGCTCTCCGAGGGCGCCAAGGCGATGGACATTTCCGG GGCTGAGCTCTCCGGTCCGGTGGATCCGGGCACCCGCTTCTATGTACGCCCCGCGGAGTGCGTTGCGACGGTGACGGTCT CGGTGGTCGATCTGGCCGCGACGGCTCGGGTGCTCACCGGGGTGGCTGACGGGCCGTTGACCCCCTTGGCGCTGGTACAT CCCGGTGCACATGACGTCGTGGAATTGACGGTCGAATGGGCCCCGGCCGCGGAACTGTCGCGGGTGAGCTAG
Upstream 100 bases:
>100_bases TGTTGATTCCCTAACCCCGCCCCTAGCATCCCGGCTCACCGTTTTTCGACGGTATCGAGTTATTGGGCTGCATTCCGCCG GCACAAGGATCAACCAAACC
Downstream 100 bases:
>100_bases CGCCAGGCGCGCGAGAACTTCAGGAACGCGTCGTTTTCCATCGGTGCTCCGATGGTCACCCGGACGCCATCGGTTCCAAA GGGGCGCACAATGATTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTTHSLLSLVEWPSARITGSRRRSNAEVLPRRLTRYRGGTYSSTVDEVVFTDGTSARTDLIRLNPTITAYSLDIAGIAPN LPSGYAVADWLSVANLRARTRESQVAWILANSFPALSTARLSRRLRAAGYLGEANIKDHEAIAGTQAAIWFLTNGVELDT AARNVPTATRKSPSFIEFEFPERPQLGGLTIRTGVGQQPADVRLHASVNGAVWREVSSSELSLSAGAAQYAKVLGVGATV AETQYGAPDRGYRFYRLYVQGGTADVETVEFWLHDARNHRNADRVVQLYRYLLEQSLLAAGQAEHAPTIDDSQAVMAAGL MGPFVVDSQRPVVLSLSEGAKAMDISGAELSGPVDPGTRFYVRPAECVATVTVSVVDLAATARVLTGVADGPLTPLALVH PGAHDVVELTVEWAPAAELSRVS
Sequences:
>Translated_423_residues MTTHSLLSLVEWPSARITGSRRRSNAEVLPRRLTRYRGGTYSSTVDEVVFTDGTSARTDLIRLNPTITAYSLDIAGIAPN LPSGYAVADWLSVANLRARTRESQVAWILANSFPALSTARLSRRLRAAGYLGEANIKDHEAIAGTQAAIWFLTNGVELDT AARNVPTATRKSPSFIEFEFPERPQLGGLTIRTGVGQQPADVRLHASVNGAVWREVSSSELSLSAGAAQYAKVLGVGATV AETQYGAPDRGYRFYRLYVQGGTADVETVEFWLHDARNHRNADRVVQLYRYLLEQSLLAAGQAEHAPTIDDSQAVMAAGL MGPFVVDSQRPVVLSLSEGAKAMDISGAELSGPVDPGTRFYVRPAECVATVTVSVVDLAATARVLTGVADGPLTPLALVH PGAHDVVELTVEWAPAAELSRVS >Mature_422_residues TTHSLLSLVEWPSARITGSRRRSNAEVLPRRLTRYRGGTYSSTVDEVVFTDGTSARTDLIRLNPTITAYSLDIAGIAPNL PSGYAVADWLSVANLRARTRESQVAWILANSFPALSTARLSRRLRAAGYLGEANIKDHEAIAGTQAAIWFLTNGVELDTA ARNVPTATRKSPSFIEFEFPERPQLGGLTIRTGVGQQPADVRLHASVNGAVWREVSSSELSLSAGAAQYAKVLGVGATVA ETQYGAPDRGYRFYRLYVQGGTADVETVEFWLHDARNHRNADRVVQLYRYLLEQSLLAAGQAEHAPTIDDSQAVMAAGLM GPFVVDSQRPVVLSLSEGAKAMDISGAELSGPVDPGTRFYVRPAECVATVTVSVVDLAATARVLTGVADGPLTPLALVHP GAHDVVELTVEWAPAAELSRVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45393; Mature: 45261
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHSLLSLVEWPSARITGSRRRSNAEVLPRRLTRYRGGTYSSTVDEVVFTDGTSARTDL CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEE IRLNPTITAYSLDIAGIAPNLPSGYAVADWLSVANLRARTRESQVAWILANSFPALSTAR EEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH LSRRLRAAGYLGEANIKDHEAIAGTQAAIWFLTNGVELDTAARNVPTATRKSPSFIEFEF HHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEECCEEECCHHCCCCCCCCCCCCEEEEEC PERPQLGGLTIRTGVGQQPADVRLHASVNGAVWREVSSSELSLSAGAAQYAKVLGVGATV CCCCCCCCEEEECCCCCCCCCEEEEEECCCHHEECCCCCCEEECCCHHHHHHHHHCCCEE AETQYGAPDRGYRFYRLYVQGGTADVETVEFWLHDARNHRNADRVVQLYRYLLEQSLLAA HHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC GQAEHAPTIDDSQAVMAAGLMGPFVVDSQRPVVLSLSEGAKAMDISGAELSGPVDPGTRF CCCCCCCCCCCCHHHHHHHCCCCEEECCCCCEEEEECCCCCEEECCCCCCCCCCCCCCEE YVRPAECVATVTVSVVDLAATARVLTGVADGPLTPLALVHPGAHDVVELTVEWAPAAELS EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHC RVS CCC >Mature Secondary Structure TTHSLLSLVEWPSARITGSRRRSNAEVLPRRLTRYRGGTYSSTVDEVVFTDGTSARTDL CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEE IRLNPTITAYSLDIAGIAPNLPSGYAVADWLSVANLRARTRESQVAWILANSFPALSTAR EEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH LSRRLRAAGYLGEANIKDHEAIAGTQAAIWFLTNGVELDTAARNVPTATRKSPSFIEFEF HHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEECCEEECCHHCCCCCCCCCCCCEEEEEC PERPQLGGLTIRTGVGQQPADVRLHASVNGAVWREVSSSELSLSAGAAQYAKVLGVGATV CCCCCCCCEEEECCCCCCCCCEEEEEECCCHHEECCCCCCEEECCCHHHHHHHHHCCCEE AETQYGAPDRGYRFYRLYVQGGTADVETVEFWLHDARNHRNADRVVQLYRYLLEQSLLAA HHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC GQAEHAPTIDDSQAVMAAGLMGPFVVDSQRPVVLSLSEGAKAMDISGAELSGPVDPGTRF CCCCCCCCCCCCHHHHHHHCCCCEEECCCCCEEEEECCCCCEEECCCCCCCCCCCCCCEE YVRPAECVATVTVSVVDLAATARVLTGVADGPLTPLALVHPGAHDVVELTVEWAPAAELS EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHC RVS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA