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The map label for this gene is ycsE [H]

Identifier: 169627272

GI number: 169627272

Start: 160955

End: 161773

Strand: Direct

Name: ycsE [H]

Synonym: MAB_0167

Alternate gene names: 169627272

Gene position: 160955-161773 (Clockwise)

Preceding gene: 169627271

Following gene: 169627275

Centisome position: 3.18

GC content: 64.22

Gene sequence:

>819_bases
GTGACCCATCCAGCCCTTATCGCGTCCGATGTGGACGGGACCCTGATCGATTCTGCCGAGATTTTGTCCGCACGCACGCG
TGCGGTCATCACCGCCGCGGTCGAGTCCGGATCGGCCTTCGTCCTGGCTACCGGCCGCCCACCCCGATGGATCACCCCGA
TCGTCGACGCTCTCGGTTTCGCGCCGATTTCTGTGTGTGCCAACGGTTCCGTTCTGTATGACGCCGAAAACGACCGGATA
ATCTCGGCCGCCACGCTCAGTCCGTCGGAACTGGCGGTGCTGGCCGAGGTGGCGCAGGCGGCCATCCCCGGGGTGGGCCT
GGCCGTGGAACGGGTGGGGCGCAGTGCACACGATGCCGCCACGCCGCAGTTCGTCAGCTCGCCGGGTTATGAGCATGCAT
GGCTGAACCCCGATAACACGGAGGTGTCCCTCGAGGATTTGCTGAGCTTCCCGGCGGTGAAGTTGTTGGTGCGCAAGGCT
GGAGCTCGTAGCTCGGAGATGGCCGAGGTATTGGCGCCCCTGGTGACCGAGGCGGGTGCGGCTATCACCTATTCCACCGA
CAACGGGCTCATCGAGGTAATGCCCACTGGAATCAGCAAGGCCAGCGGAATCGCGATAGTAGCGAAACAGGCAGGGGTGC
AGCCCGAATCGATCATTGCCTTCGGTGACATGCCCAATGACGTCGCCATGTTGCGATGGGCGGGCCACGGAGTGGCGATG
GGTAACGCACACCCGGAGGCGCGCGCGGCTGCCAATGAGGTGACCGCCACCAATAACGACGATGGCGTGGCCAAGGTTCT
CGAACGCTGGTGGGGCTGA

Upstream 100 bases:

>100_bases
GCACTGCCCCCACAGTGGAGGAGGCAGCCGTGCTCGACAGCGAGGAACTGGCCGAACGGGCCCGCAGGAAGGCCCGGAAA
AAGACGGATCCGGGGCACGC

Downstream 100 bases:

>100_bases
GTGCTGCCGGCTCGCTAGTTGGCGGGTGCGAACTGCTCGACGGGCGGCGGCGGGGGAGGCGGAGCCGGTGCGGGCGGGGG
AGGTGCCGCGGGCGCCGCCG

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTHPALIASDVDGTLIDSAEILSARTRAVITAAVESGSAFVLATGRPPRWITPIVDALGFAPISVCANGSVLYDAENDRI
ISAATLSPSELAVLAEVAQAAIPGVGLAVERVGRSAHDAATPQFVSSPGYEHAWLNPDNTEVSLEDLLSFPAVKLLVRKA
GARSSEMAEVLAPLVTEAGAAITYSTDNGLIEVMPTGISKASGIAIVAKQAGVQPESIIAFGDMPNDVAMLRWAGHGVAM
GNAHPEARAAANEVTATNNDDGVAKVLERWWG

Sequences:

>Translated_272_residues
MTHPALIASDVDGTLIDSAEILSARTRAVITAAVESGSAFVLATGRPPRWITPIVDALGFAPISVCANGSVLYDAENDRI
ISAATLSPSELAVLAEVAQAAIPGVGLAVERVGRSAHDAATPQFVSSPGYEHAWLNPDNTEVSLEDLLSFPAVKLLVRKA
GARSSEMAEVLAPLVTEAGAAITYSTDNGLIEVMPTGISKASGIAIVAKQAGVQPESIIAFGDMPNDVAMLRWAGHGVAM
GNAHPEARAAANEVTATNNDDGVAKVLERWWG
>Mature_271_residues
THPALIASDVDGTLIDSAEILSARTRAVITAAVESGSAFVLATGRPPRWITPIVDALGFAPISVCANGSVLYDAENDRII
SAATLSPSELAVLAEVAQAAIPGVGLAVERVGRSAHDAATPQFVSSPGYEHAWLNPDNTEVSLEDLLSFPAVKLLVRKAG
ARSSEMAEVLAPLVTEAGAAITYSTDNGLIEVMPTGISKASGIAIVAKQAGVQPESIIAFGDMPNDVAMLRWAGHGVAMG
NAHPEARAAANEVTATNNDDGVAKVLERWWG

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=280, Percent_Identity=27.5, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787043, Length=272, Percent_Identity=24.2647058823529, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI87081790, Length=271, Percent_Identity=26.9372693726937, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28112; Mature: 27981

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPALIASDVDGTLIDSAEILSARTRAVITAAVESGSAFVLATGRPPRWITPIVDALGF
CCCCCEEEECCCCCEECHHHHHHHHHHEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCC
APISVCANGSVLYDAENDRIISAATLSPSELAVLAEVAQAAIPGVGLAVERVGRSAHDAA
CCCCEECCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
TPQFVSSPGYEHAWLNPDNTEVSLEDLLSFPAVKLLVRKAGARSSEMAEVLAPLVTEAGA
CCHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
AITYSTDNGLIEVMPTGISKASGIAIVAKQAGVQPESIIAFGDMPNDVAMLRWAGHGVAM
EEEEECCCCEEEEEECCCCCCCCEEEEEHHCCCCHHHEEEECCCCCCEEEEEECCCCEEE
GNAHPEARAAANEVTATNNDDGVAKVLERWWG
CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
THPALIASDVDGTLIDSAEILSARTRAVITAAVESGSAFVLATGRPPRWITPIVDALGF
CCCCEEEECCCCCEECHHHHHHHHHHEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCC
APISVCANGSVLYDAENDRIISAATLSPSELAVLAEVAQAAIPGVGLAVERVGRSAHDAA
CCCCEECCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
TPQFVSSPGYEHAWLNPDNTEVSLEDLLSFPAVKLLVRKAGARSSEMAEVLAPLVTEAGA
CCHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
AITYSTDNGLIEVMPTGISKASGIAIVAKQAGVQPESIIAFGDMPNDVAMLRWAGHGVAM
EEEEECCCCEEEEEECCCCCCCCEEEEEHHCCCCHHHEEEECCCCCCEEEEEECCCCEEE
GNAHPEARAAANEVTATNNDDGVAKVLERWWG
CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]