| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627217
Identifier: 169627217
GI number: 169627217
Start: 112307
End: 113848
Strand: Direct
Name: 169627217
Synonym: MAB_0112
Alternate gene names: NA
Gene position: 112307-113848 (Clockwise)
Preceding gene: 169627209
Following gene: 169627218
Centisome position: 2.22
GC content: 70.49
Gene sequence:
>1542_bases ATGCTGTTCGCCGTGGGGCGACATCGAGCAAATCCGAGCAGGAGAAGCCAGCAGCTGAAGCGTGCCTCTGCGCGCGCCGC TGTGGTGACCGTGCTCAGCTCGGGGACCCTCATGGGGGGATTCGGGGTTTTCGCCATCACCACGCCGGCCGCGGACGCAA AACCCGGCGGAGGATCGGGCAACGACCATGACCACGATCACGGCCTGGGTGGCGCTCTGCACAAACTCACCGGAGGCCTG TTGGGTGGCGGTGGCGGCGGTAACGGCGGCCCGGGCAGCGGTGGCGCCCGTAACGCACCCTCGGCCCCGAGCTTCGGCAA GAGCCTGCACGGCGGCTCCGGGTCGGAAGGTGCCGCGGGGGGCAACGGCGACTCCGCCAAGAGCGATAAAGACAAAGACA AGGGCCCCGGGGCGAGTGTCCCGAAGCCCGGATCAGCCGGCTCCACCGGCAAGACAGCCGATAGCGCGGCAGGTAGCGCG GGTTCGGGCACCGGCACGCCGGGCGCCAATTCCAGCGCTCCGGGCGGCTCGAATGGCTCGTCCGGTGGAGGAATCGGCGG CGTGGGGACGACCGTGGGGACAACTCTGCCGCACTCGGGCGGTGCCGCTGGGGTGCACACCCCGACCGCCGAGGGTGCGG CTGCCACAGAAAGCTCCGCTGGCACCGGAACTCACACCGAAGAGCATCCTTCGTTGAAGGGTGCGCTCGGCTCGGTGGCC GGTGCGCTGGCACCCAAGACGGAGACCGCCACCACACCCAAAACGGAGACGGCGACCTCACCGCACACGTCGACGGCGCC GGGCGCGACGGCCGAGACACCCACCGCAGGCACCACGCACCCGGAGCACGAGTCGTCGGCCGAGGAGCCCAAGGTTCCCG GTGTCACCGTGAATATGGGCGGACGCACCATCATCATCTGGAAGAAGAAGCCGAGCACTTCGACGCACACACCGGGTGCG GGCACCGGAACGAATCCGGGGCACGAATCCGAAGGCGACCGCGACCACGTGATCAACCTGCCGGGCTTCCCCGCGCTGGG CGGTGCCACCAACCCGGACGCCCCGTTCGGTGGAGCCGCGGGAACGCGGACCCCGGGCGGGAACCCAAGCATCCACACCG GGCCGGTCGCGCCGCCGACGGTGCCCACTCCGAAGGCGCCTGCTGTTGCGATCGCGACACCGCCCGCGCCGCCGGTCCTC GCGCCGCTGGCGCCGGTCGTGCCGCCGACGCCACCGGTCGTCACCGTCAAGCAGGCCGAGGGCGGACGGGGCGGTGATGT CGTGGTCACCGCGGGCGGCACCAAGCAGCCAGAGGCCGTCACCAAGCCGATCCAGCAGTTCGTCGCCGCCGAGACCATCG CGCCGCGCACCGGCTACACCGATTACCTCCGTCTGACCAAGACATCCGAGATCGCCGCGGTGGCAATTCCGGGTGCCGCA GGTATCGCGATGATGACCTTCGTGGGAGCCGCGCTCGGATACCGGCAAGCCAAGGCCGGGCATACCGTGCGCGCCTCTGC CGCCGCCCGCTTCCTGGAATAG
Upstream 100 bases:
>100_bases CGAAGTCTCGGCCGCCACCATTTCCGCGGTACGTGGGAAACATGAGGTGAAAGGGCCCACAATATGTGACGGACATTTGA CCTCCGAGCAAATTCCCGGC
Downstream 100 bases:
>100_bases GGGAGAATTGACACAGCACCCCATGAGGGGTCTGTCCGGGAAGGCACACCGCGAGGGGAGAGGCACATGGGCGCAGGCCG TCGTGTGACCGATGCCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MLFAVGRHRANPSRRSQQLKRASARAAVVTVLSSGTLMGGFGVFAITTPAADAKPGGGSGNDHDHDHGLGGALHKLTGGL LGGGGGGNGGPGSGGARNAPSAPSFGKSLHGGSGSEGAAGGNGDSAKSDKDKDKGPGASVPKPGSAGSTGKTADSAAGSA GSGTGTPGANSSAPGGSNGSSGGGIGGVGTTVGTTLPHSGGAAGVHTPTAEGAAATESSAGTGTHTEEHPSLKGALGSVA GALAPKTETATTPKTETATSPHTSTAPGATAETPTAGTTHPEHESSAEEPKVPGVTVNMGGRTIIIWKKKPSTSTHTPGA GTGTNPGHESEGDRDHVINLPGFPALGGATNPDAPFGGAAGTRTPGGNPSIHTGPVAPPTVPTPKAPAVAIATPPAPPVL APLAPVVPPTPPVVTVKQAEGGRGGDVVVTAGGTKQPEAVTKPIQQFVAAETIAPRTGYTDYLRLTKTSEIAAVAIPGAA GIAMMTFVGAALGYRQAKAGHTVRASAAARFLE
Sequences:
>Translated_513_residues MLFAVGRHRANPSRRSQQLKRASARAAVVTVLSSGTLMGGFGVFAITTPAADAKPGGGSGNDHDHDHGLGGALHKLTGGL LGGGGGGNGGPGSGGARNAPSAPSFGKSLHGGSGSEGAAGGNGDSAKSDKDKDKGPGASVPKPGSAGSTGKTADSAAGSA GSGTGTPGANSSAPGGSNGSSGGGIGGVGTTVGTTLPHSGGAAGVHTPTAEGAAATESSAGTGTHTEEHPSLKGALGSVA GALAPKTETATTPKTETATSPHTSTAPGATAETPTAGTTHPEHESSAEEPKVPGVTVNMGGRTIIIWKKKPSTSTHTPGA GTGTNPGHESEGDRDHVINLPGFPALGGATNPDAPFGGAAGTRTPGGNPSIHTGPVAPPTVPTPKAPAVAIATPPAPPVL APLAPVVPPTPPVVTVKQAEGGRGGDVVVTAGGTKQPEAVTKPIQQFVAAETIAPRTGYTDYLRLTKTSEIAAVAIPGAA GIAMMTFVGAALGYRQAKAGHTVRASAAARFLE >Mature_513_residues MLFAVGRHRANPSRRSQQLKRASARAAVVTVLSSGTLMGGFGVFAITTPAADAKPGGGSGNDHDHDHGLGGALHKLTGGL LGGGGGGNGGPGSGGARNAPSAPSFGKSLHGGSGSEGAAGGNGDSAKSDKDKDKGPGASVPKPGSAGSTGKTADSAAGSA GSGTGTPGANSSAPGGSNGSSGGGIGGVGTTVGTTLPHSGGAAGVHTPTAEGAAATESSAGTGTHTEEHPSLKGALGSVA GALAPKTETATTPKTETATSPHTSTAPGATAETPTAGTTHPEHESSAEEPKVPGVTVNMGGRTIIIWKKKPSTSTHTPGA GTGTNPGHESEGDRDHVINLPGFPALGGATNPDAPFGGAAGTRTPGGNPSIHTGPVAPPTVPTPKAPAVAIATPPAPPVL APLAPVVPPTPPVVTVKQAEGGRGGDVVVTAGGTKQPEAVTKPIQQFVAAETIAPRTGYTDYLRLTKTSEIAAVAIPGAA GIAMMTFVGAALGYRQAKAGHTVRASAAARFLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49135; Mature: 49135
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFAVGRHRANPSRRSQQLKRASARAAVVTVLSSGTLMGGFGVFAITTPAADAKPGGGSG CEEECCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCEEECCEEEEEECCCCCCCCCCCCC NDHDHDHGLGGALHKLTGGLLGGGGGGNGGPGSGGARNAPSAPSFGKSLHGGSGSEGAAG CCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNGDSAKSDKDKDKGPGASVPKPGSAGSTGKTADSAAGSAGSGTGTPGANSSAPGGSNGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC SGGGIGGVGTTVGTTLPHSGGAAGVHTPTAEGAAATESSAGTGTHTEEHPSLKGALGSVA CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH GALAPKTETATTPKTETATSPHTSTAPGATAETPTAGTTHPEHESSAEEPKVPGVTVNMG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC GRTIIIWKKKPSTSTHTPGAGTGTNPGHESEGDRDHVINLPGFPALGGATNPDAPFGGAA CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC GTRTPGGNPSIHTGPVAPPTVPTPKAPAVAIATPPAPPVLAPLAPVVPPTPPVVTVKQAE CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEECCC GGRGGDVVVTAGGTKQPEAVTKPIQQFVAAETIAPRTGYTDYLRLTKTSEIAAVAIPGAA CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCEEEEEECCHH GIAMMTFVGAALGYRQAKAGHTVRASAAARFLE HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCC >Mature Secondary Structure MLFAVGRHRANPSRRSQQLKRASARAAVVTVLSSGTLMGGFGVFAITTPAADAKPGGGSG CEEECCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCEEECCEEEEEECCCCCCCCCCCCC NDHDHDHGLGGALHKLTGGLLGGGGGGNGGPGSGGARNAPSAPSFGKSLHGGSGSEGAAG CCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNGDSAKSDKDKDKGPGASVPKPGSAGSTGKTADSAAGSAGSGTGTPGANSSAPGGSNGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC SGGGIGGVGTTVGTTLPHSGGAAGVHTPTAEGAAATESSAGTGTHTEEHPSLKGALGSVA CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH GALAPKTETATTPKTETATSPHTSTAPGATAETPTAGTTHPEHESSAEEPKVPGVTVNMG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC GRTIIIWKKKPSTSTHTPGAGTGTNPGHESEGDRDHVINLPGFPALGGATNPDAPFGGAA CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC GTRTPGGNPSIHTGPVAPPTVPTPKAPAVAIATPPAPPVLAPLAPVVPPTPPVVTVKQAE CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEECCC GGRGGDVVVTAGGTKQPEAVTKPIQQFVAAETIAPRTGYTDYLRLTKTSEIAAVAIPGAA CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCEEEEEECCHH GIAMMTFVGAALGYRQAKAGHTVRASAAARFLE HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA