| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is narS [H]
Identifier: 169627166
GI number: 169627166
Start: 57885
End: 59072
Strand: Direct
Name: narS [H]
Synonym: MAB_0061
Alternate gene names: 169627166
Gene position: 57885-59072 (Clockwise)
Preceding gene: 169627165
Following gene: 169627167
Centisome position: 1.14
GC content: 64.39
Gene sequence:
>1188_bases ATGACCCGGCTGGATAACATGGCCGACTATTTCGCCGCTGAACCCATGCGGGTGTCGGCCTGGCTGCGGCTGCCGCTTAT CGGGTTGATAGTGCTGCTGGGTTCAGATCCGAATATTCAGATGTGGCACAACGGCGTCTACTACGGGGTGCTGGCCGCGT ACACGCTGTCGGCCGTCGTATGGGTGGGGATCGCGGTACGCGGACAGGTTGCCGATTGGGTTGCTCCCGCAGCCACTTCG GCAGATATCGCCGCCGTGGTGATGCTGTGCCTGGCATCCGGCGCAGGCAACACCGAGTTGCTGCCGGTGTTCTTCCTGCT CCCCGTGTCGGTGGCTTTCCAGGAACGGCCCGCTATCACGGCAATTCTCGGGATCATCACGGCCGTAGCATATTTCGGCA TACTTGTGTACTACATCGCCGATGGCAATCTGGAGAGGATTCCGGGCGACGAGTACGTGACCTGGGCGGCGCTACTGTGG TTGACCGTCTTCACGACAGGTATGTGCTTTGTGCTCAAACGCCGTTCCGCGCGCGTCGTCCAGCTGGTGCACATACGTGA GCAGTTGGTCCTGGAATCGATGCGTGCCGACGAGCGCCGCAATCGCGAGGTGGCCGAGCGGCTGCACGATGGTCCGCTCC AAAATCTGTTGGCGGCTCGTCTGCGCATCGAGGAAGTACTTGAACGCCAGTCGGATCCGGTGCTGACGGCGGTGCACTCA TCGTTGCGAGAGACGGCGGCCGAGCTACGCGGCGCGGTGTCGTCGCTGCATCCGCAGGTGTTGATCGAGCTGGGATTGAC GGCGGCGATCCGGGAGCTGGCGCGTCAGCACACGGCGCGTGGCATCGTCGACGTCAGCACGGCCGTCGAGGAGGTGGGCA GCCCCCCGGCGCAACCACTGGTCTACCGCGCGGCCAAGGAATTGTTGACCAATGCTGTGAAACACGGCAGGGCCAAGAAC ATTCGGGTGGAGCTCAGCTCGCGACGGTGCTGGCTCACCCTCGTCGTCACGGATGACGGCCGGGGCTTCGACCCGCGTGA TCTCGTGCTCTCGGTTGCCGATGGGCATATCGGCCTGGCCTCGCTGACCGTTCCCATCGAGGCCGCCGGTGGCGCAGTCA CGATCACCTCGGCGCCGGGCGCCGGTACCCGGGTGTCCGTCACGGCGCCGGCCGATATGGCAGCGTAG
Upstream 100 bases:
>100_bases TGAAGACTCATGTGCAGCGCCTGTACGAGAAGCTCGGTGTCGGCGACCGTGCCGCGGCGGTGGCAGAAGCGATGCGCCGC GGCTTGCTGGAATAGCTGCG
Downstream 100 bases:
>100_bases AGGGGTCCGCTGGCCGTCACGGGCCCGCCTCAGGAGATGGAGAGTAGATGTACGACCTCGTCATCATCGGTTCCGGCAGC GCAAACTCCTTGCCCGACGA
Product: two component sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTRLDNMADYFAAEPMRVSAWLRLPLIGLIVLLGSDPNIQMWHNGVYYGVLAAYTLSAVVWVGIAVRGQVADWVAPAATS ADIAAVVMLCLASGAGNTELLPVFFLLPVSVAFQERPAITAILGIITAVAYFGILVYYIADGNLERIPGDEYVTWAALLW LTVFTTGMCFVLKRRSARVVQLVHIREQLVLESMRADERRNREVAERLHDGPLQNLLAARLRIEEVLERQSDPVLTAVHS SLRETAAELRGAVSSLHPQVLIELGLTAAIRELARQHTARGIVDVSTAVEEVGSPPAQPLVYRAAKELLTNAVKHGRAKN IRVELSSRRCWLTLVVTDDGRGFDPRDLVLSVADGHIGLASLTVPIEAAGGAVTITSAPGAGTRVSVTAPADMAA
Sequences:
>Translated_395_residues MTRLDNMADYFAAEPMRVSAWLRLPLIGLIVLLGSDPNIQMWHNGVYYGVLAAYTLSAVVWVGIAVRGQVADWVAPAATS ADIAAVVMLCLASGAGNTELLPVFFLLPVSVAFQERPAITAILGIITAVAYFGILVYYIADGNLERIPGDEYVTWAALLW LTVFTTGMCFVLKRRSARVVQLVHIREQLVLESMRADERRNREVAERLHDGPLQNLLAARLRIEEVLERQSDPVLTAVHS SLRETAAELRGAVSSLHPQVLIELGLTAAIRELARQHTARGIVDVSTAVEEVGSPPAQPLVYRAAKELLTNAVKHGRAKN IRVELSSRRCWLTLVVTDDGRGFDPRDLVLSVADGHIGLASLTVPIEAAGGAVTITSAPGAGTRVSVTAPADMAA >Mature_394_residues TRLDNMADYFAAEPMRVSAWLRLPLIGLIVLLGSDPNIQMWHNGVYYGVLAAYTLSAVVWVGIAVRGQVADWVAPAATSA DIAAVVMLCLASGAGNTELLPVFFLLPVSVAFQERPAITAILGIITAVAYFGILVYYIADGNLERIPGDEYVTWAALLWL TVFTTGMCFVLKRRSARVVQLVHIREQLVLESMRADERRNREVAERLHDGPLQNLLAARLRIEEVLERQSDPVLTAVHSS LRETAAELRGAVSSLHPQVLIELGLTAAIRELARQHTARGIVDVSTAVEEVGSPPAQPLVYRAAKELLTNAVKHGRAKNI RVELSSRRCWLTLVVTDDGRGFDPRDLVLSVADGHIGLASLTVPIEAAGGAVTITSAPGAGTRVSVTAPADMAA
Specific function: Probable member of the two-component regulatory system NarS/NarL. May activate NarL by phosphorylation [H]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42618; Mature: 42487
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLDNMADYFAAEPMRVSAWLRLPLIGLIVLLGSDPNIQMWHNGVYYGVLAAYTLSAVV CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH WVGIAVRGQVADWVAPAATSADIAAVVMLCLASGAGNTELLPVFFLLPVSVAFQERPAIT HHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHH AILGIITAVAYFGILVYYIADGNLERIPGDEYVTWAALLWLTVFTTGMCFVLKRRSARVV HHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QLVHIREQLVLESMRADERRNREVAERLHDGPLQNLLAARLRIEEVLERQSDPVLTAVHS HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH SLRETAAELRGAVSSLHPQVLIELGLTAAIRELARQHTARGIVDVSTAVEEVGSPPAQPL HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH VYRAAKELLTNAVKHGRAKNIRVELSSRRCWLTLVVTDDGRGFDPRDLVLSVADGHIGLA HHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEEECCCCCCCHHHHEEEECCCCEEEE SLTVPIEAAGGAVTITSAPGAGTRVSVTAPADMAA EEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCC >Mature Secondary Structure TRLDNMADYFAAEPMRVSAWLRLPLIGLIVLLGSDPNIQMWHNGVYYGVLAAYTLSAVV CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH WVGIAVRGQVADWVAPAATSADIAAVVMLCLASGAGNTELLPVFFLLPVSVAFQERPAIT HHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHH AILGIITAVAYFGILVYYIADGNLERIPGDEYVTWAALLWLTVFTTGMCFVLKRRSARVV HHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QLVHIREQLVLESMRADERRNREVAERLHDGPLQNLLAARLRIEEVLERQSDPVLTAVHS HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH SLRETAAELRGAVSSLHPQVLIELGLTAAIRELARQHTARGIVDVSTAVEEVGSPPAQPL HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH VYRAAKELLTNAVKHGRAKNIRVELSSRRCWLTLVVTDDGRGFDPRDLVLSVADGHIGLA HHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEEECCCCCCCHHHHEEEECCCCEEEE SLTVPIEAAGGAVTITSAPGAGTRVSVTAPADMAA EEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]