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The map label for this gene is ppe1 [H]

Identifier: 169627152

GI number: 169627152

Start: 44209

End: 45741

Strand: Direct

Name: ppe1 [H]

Synonym: MAB_0047

Alternate gene names: 169627152

Gene position: 44209-45741 (Clockwise)

Preceding gene: 169627151

Following gene: 169627153

Centisome position: 0.87

GC content: 66.99

Gene sequence:

>1533_bases
GTGTCGGCTCCGATTTGGATGGCTTCTCCCCCCGAGGTCCATTCGGCGCTGCTGAGCGCCGGACCCGGGCCGGGCGCACT
GCTGGCCGCTGCCGCGCAATGGCAGGCGTTGTCCACGCAATATGCCACTGCCGCAACAGAACTTACCGAGCTGCTGGGCA
GTACCGTCGCGGGTTCGTGGCAGGGCCCCAGTGCTATGCAATACGCGGCCAGTCACGCCCCTTACCTGGCCTGGCTGACC
CAGCAGAGTGCGATGAGCGCCACCAACGCCGTGCTGCACGAAACCAGCGCCGCTGCCTACACCACCGCCCTGGCGGCCAT
GCCCACCCTGGCCGAGCTGGCCGCCAACCACATGATCCACGGAGTGCTGCTGGCCACCAACTTCTTTGGTATCAACACCA
TTCCCATCGCGCTGAACGAGGCCGACTACATCCGGATGTGGATTCAGGCCGCCACCACCATGGGCGTGTATCAAGGTGTT
TCGAGTGCGGCCCTGGCGGCCACAACACCTACGCAGCCATCGCCGATGATCATGGCACCCGGCGGCGAAATGTCCCGTAT
GTCGGCCGACATGATGTCAATGGCCGCACAGCCGCAAGCCGCCGAATCCGGCAGCGCGCTCGATAGCAGCAACAACATCA
TGGATCAGCTGATGCGGTTCATGACCAATCCGCTTGGCACGCTTCAGGACATGATCGAAGACTTCATGAGGAACCCGGTA
GCCGCGTTCTTTGCGTGGTTCCCGCTCTTGTTCTTCATCGCGTACGAGGCCTTCTTCATTCCCTTCGGGTTCACCTTCTG
GGGCGTGCTGCTTTCGGCGCCGGCCTGGCTGCCGATCGTGCTGGGGCTCGCGCTATCGGCGCTGGTGCCTCCCGCAGGGA
TCGAGGAGCCGGGCCAGGAGGACGAGCCGGGCAGAGAGCCGACCCGCATTGAGCGAAGGAGTCCGCAACAGGATTTGCAA
CTGGCTCATGTCCCTTCGGGCTCACCGACACCGGGTGGCTCGACAACCACCACGGTGACGTCCGGCGGCTCGGCACCACC
GGCACCGGCTCCGGCCACGGCTACTCCGGCTTACATGGTGTACGCGGTGCAGGAGGATCCACCGGCGGCAAGGTTTGGGC
CGACGCTCAATGAGGGCAGCGGCGCCAAGGCGCCGGCGGCCGGAATCTCTGCCGCCGCCGCGGCTGCCGCCTCGGCACGC
TCACGCGCGCGCCGCAAGCGCGCGGCGCGGATCAAGGATCCGGCTCCGCAGTTCATGGACATGAACTCGTCGGTGGCTCC
GGACTTTTCGGAGTCCGCGGCGCGGCAGACCACGGGCGTCGGGGCGTCGGCGCGAGGTGCGGGCCGACTCGGTTTTGCCG
GCACCGCTCCGGCAGCGGCCGGGACGACGGCGGCTGCCGGGCTGGTGGAACGGGACAGCGGTACGGCCGAAGCATTGGAC
GGCGCACGTACCGTACCGATGCTTCCCACCAGCTGGGGCACCGATTCCGAACACGGCCCAGACAGGCCCGCCGAAGGGGG
GTCCAGCACCTGA

Upstream 100 bases:

>100_bases
TGGGCCGGGCCGGACTCGGTGTGTCGGAGTCCGCGGCCAGCTACACCACCGGGGACATGCAGGCCGCCGCGGCGTACATG
ATCGCGCGGGGTTAACACCG

Downstream 100 bases:

>100_bases
CCGGCCCGCCCGAGCTCCATCGACCATCTGGATTACCGACAACACAACATGATTGAGGAGATGTTATGAGTTTGCTTGAT
GCGCATATTCCGGCTTTGGT

Product: PPE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MSAPIWMASPPEVHSALLSAGPGPGALLAAAAQWQALSTQYATAATELTELLGSTVAGSWQGPSAMQYAASHAPYLAWLT
QQSAMSATNAVLHETSAAAYTTALAAMPTLAELAANHMIHGVLLATNFFGINTIPIALNEADYIRMWIQAATTMGVYQGV
SSAALAATTPTQPSPMIMAPGGEMSRMSADMMSMAAQPQAAESGSALDSSNNIMDQLMRFMTNPLGTLQDMIEDFMRNPV
AAFFAWFPLLFFIAYEAFFIPFGFTFWGVLLSAPAWLPIVLGLALSALVPPAGIEEPGQEDEPGREPTRIERRSPQQDLQ
LAHVPSGSPTPGGSTTTTVTSGGSAPPAPAPATATPAYMVYAVQEDPPAARFGPTLNEGSGAKAPAAGISAAAAAAASAR
SRARRKRAARIKDPAPQFMDMNSSVAPDFSESAARQTTGVGASARGAGRLGFAGTAPAAAGTTAAAGLVERDSGTAEALD
GARTVPMLPTSWGTDSEHGPDRPAEGGSST

Sequences:

>Translated_510_residues
MSAPIWMASPPEVHSALLSAGPGPGALLAAAAQWQALSTQYATAATELTELLGSTVAGSWQGPSAMQYAASHAPYLAWLT
QQSAMSATNAVLHETSAAAYTTALAAMPTLAELAANHMIHGVLLATNFFGINTIPIALNEADYIRMWIQAATTMGVYQGV
SSAALAATTPTQPSPMIMAPGGEMSRMSADMMSMAAQPQAAESGSALDSSNNIMDQLMRFMTNPLGTLQDMIEDFMRNPV
AAFFAWFPLLFFIAYEAFFIPFGFTFWGVLLSAPAWLPIVLGLALSALVPPAGIEEPGQEDEPGREPTRIERRSPQQDLQ
LAHVPSGSPTPGGSTTTTVTSGGSAPPAPAPATATPAYMVYAVQEDPPAARFGPTLNEGSGAKAPAAGISAAAAAAASAR
SRARRKRAARIKDPAPQFMDMNSSVAPDFSESAARQTTGVGASARGAGRLGFAGTAPAAAGTTAAAGLVERDSGTAEALD
GARTVPMLPTSWGTDSEHGPDRPAEGGSST
>Mature_509_residues
SAPIWMASPPEVHSALLSAGPGPGALLAAAAQWQALSTQYATAATELTELLGSTVAGSWQGPSAMQYAASHAPYLAWLTQ
QSAMSATNAVLHETSAAAYTTALAAMPTLAELAANHMIHGVLLATNFFGINTIPIALNEADYIRMWIQAATTMGVYQGVS
SAALAATTPTQPSPMIMAPGGEMSRMSADMMSMAAQPQAAESGSALDSSNNIMDQLMRFMTNPLGTLQDMIEDFMRNPVA
AFFAWFPLLFFIAYEAFFIPFGFTFWGVLLSAPAWLPIVLGLALSALVPPAGIEEPGQEDEPGREPTRIERRSPQQDLQL
AHVPSGSPTPGGSTTTTVTSGGSAPPAPAPATATPAYMVYAVQEDPPAARFGPTLNEGSGAKAPAAGISAAAAAAASARS
RARRKRAARIKDPAPQFMDMNSSVAPDFSESAARQTTGVGASARGAGRLGFAGTAPAAAGTTAAAGLVERDSGTAEALDG
ARTVPMLPTSWGTDSEHGPDRPAEGGSST

Specific function: Unknown

COG id: COG5651

COG function: function code N; PPE-repeat proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000030 [H]

Pfam domain/function: PF00823 PPE [H]

EC number: NA

Molecular weight: Translated: 52426; Mature: 52295

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPIWMASPPEVHSALLSAGPGPGALLAAAAQWQALSTQYATAATELTELLGSTVAGSW
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QGPSAMQYAASHAPYLAWLTQQSAMSATNAVLHETSAAAYTTALAAMPTLAELAANHMIH
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLLATNFFGINTIPIALNEADYIRMWIQAATTMGVYQGVSSAALAATTPTQPSPMIMAP
HHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCEEECC
GGEMSRMSADMMSMAAQPQAAESGSALDSSNNIMDQLMRFMTNPLGTLQDMIEDFMRNPV
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHH
AAFFAWFPLLFFIAYEAFFIPFGFTFWGVLLSAPAWLPIVLGLALSALVPPAGIEEPGQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
DEPGREPTRIERRSPQQDLQLAHVPSGSPTPGGSTTTTVTSGGSAPPAPAPATATPAYMV
CCCCCCCCHHHHCCCHHHCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEE
YAVQEDPPAARFGPTLNEGSGAKAPAAGISAAAAAAASARSRARRKRAARIKDPAPQFMD
EEECCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC
MNSSVAPDFSESAARQTTGVGASARGAGRLGFAGTAPAAAGTTAAAGLVERDSGTAEALD
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHC
GARTVPMLPTSWGTDSEHGPDRPAEGGSST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAPIWMASPPEVHSALLSAGPGPGALLAAAAQWQALSTQYATAATELTELLGSTVAGSW
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QGPSAMQYAASHAPYLAWLTQQSAMSATNAVLHETSAAAYTTALAAMPTLAELAANHMIH
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLLATNFFGINTIPIALNEADYIRMWIQAATTMGVYQGVSSAALAATTPTQPSPMIMAP
HHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCEEECC
GGEMSRMSADMMSMAAQPQAAESGSALDSSNNIMDQLMRFMTNPLGTLQDMIEDFMRNPV
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHH
AAFFAWFPLLFFIAYEAFFIPFGFTFWGVLLSAPAWLPIVLGLALSALVPPAGIEEPGQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
DEPGREPTRIERRSPQQDLQLAHVPSGSPTPGGSTTTTVTSGGSAPPAPAPATATPAYMV
CCCCCCCCHHHHCCCHHHCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEE
YAVQEDPPAARFGPTLNEGSGAKAPAAGISAAAAAAASARSRARRKRAARIKDPAPQFMD
EEECCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC
MNSSVAPDFSESAARQTTGVGASARGAGRLGFAGTAPAAAGTTAAAGLVERDSGTAEALD
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHC
GARTVPMLPTSWGTDSEHGPDRPAEGGSST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]