| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627146
Identifier: 169627146
GI number: 169627146
Start: 38299
End: 39657
Strand: Reverse
Name: 169627146
Synonym: MAB_0039c
Alternate gene names: NA
Gene position: 39657-38299 (Counterclockwise)
Preceding gene: 169627155
Following gene: 169627145
Centisome position: 0.78
GC content: 68.51
Gene sequence:
>1359_bases ATGGGAATTGTCCAGCGCTTTGAGCGCAAGCTTGAAGACGTGGTCGGCGATGCCTTCGCCCGCGTATTCGGCGGCAGCAT CGTCCCGCAGGAAGTGCAGGCGTCGCTGCGCCGGGAAGCCGCCGACGGAGTCCGGTCAGCGGGCCAGGGGCGGCTACTGG CTCCCAACGAGTTCTTTGTTCTGCTCAGCACCGCAGATCACGAGAAAGCGGCCGACGACCGCGATCTCAACCCAGACACG TTCGCCGAACTCCTGCGCGAATATATTCGCGATCAGGGGTGGCAAACGTATGGTGAGGTTGTTGTCCGATTCGAACAATC ACCGAACTTGCACACCGGCCAGTTTCGTACGCGCGGTGTGGTCAATCCCGATAGCAAGCGGGACCGTCCGCACGGCGCCG TGACGACTGCCCCTCCGACCCCGGATCCACAACCAGGAGCACCCATGACTGACAATCCAGGTCCCCAGCAGGGCCGCCCC GGCGAAGAGTACGGCCGAGAGGACGACCGTTATGGGCGTCCCGATCAGGATCCGCGCGGTCAGCAGCCGCAGGGCGGCCA GGGATACCCCCCGCGCCAGGGTGGCTATGAGGGCGGCGGCTACGGACAGGGCCAGCCGTACGGCCAGGACTATGGACGCC CCCCAGCTGGCTACGACCAAGGCGGCTACCAGCAGCGTCCCCCCCAGCAAGGCGGCTACGACCAGGGCGGCTACGGTGCT CCGCCGCAAGCACCGCAGGGCGGTGGCGACTACGGACGTCCGCCCGCCCCGCCGCAGCAGGGTGGCGGATACGGCGCCCC GCCGCAGCAGGGCGGCTACGGCGAGCCTCCGCGCCCCAACTACGGCGAGTACGAGCAGGGTGGCGGCTATGGCGGCGGCC AGTACGGCGGCCAGCAGGGCCCCCCTCCCGGCCAGGACTACGGGCGTCCCCCGGCCTACCCGCAGCAGGGCGGTTACGGC GCCCCGCCGCAGCAGGGTGGCTATGGCTCACCGGAGTACGGCGACTACGAGCAGGGCGGCTACCAGAGCAGCCCCGATTA CGGCGCCCCCGCCGGTGGTCCCGGCGGCGGCCGCACCACCGTCACGTTGCAGCTGGACGACGGCAGTGGCCGCACCTATC AGCTGCGTGAGGGCACCAATGTGATCGGCCGTGGCCAGGATGCACAGTTCCGCCTGCCGGACACCGGTGTTTCCCGCCGT CACCTCGAGGTGCGCTTTGACGGACACGCCGCGCTGCTGTCGGATCTGAATTCGACCAACGGCACCACTGTCAACAACGC GCCGGTCACCGAGTGGCAGTTGGCCGATGGCGACATCATCCGGCTGGGACACTCCGAGATCATCGTTCGGGTCCAGTAG
Upstream 100 bases:
>100_bases CCGATCATCAAACCGATACCATCTATTCGAGATCCGCTCGCGGCGGTGCGCTGTGTCATGCGCGCAGCACCCTCCGCGCG ATCGCCGAAAGGAGGAAGGC
Downstream 100 bases:
>100_bases GGAAACCGAGGAACAGCGACCGCATCAGCGACACCGCGTTCGACACCGGCCGCATGTATCGGCCCCCGACCGGTGAATCT GACAAGTATCGTTGCCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; Forkhead-Associated Protein; Protein Containing Forkhead-Associated Domain; Xyppx Repeat-Containing Protein
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MGIVQRFERKLEDVVGDAFARVFGGSIVPQEVQASLRREAADGVRSAGQGRLLAPNEFFVLLSTADHEKAADDRDLNPDT FAELLREYIRDQGWQTYGEVVVRFEQSPNLHTGQFRTRGVVNPDSKRDRPHGAVTTAPPTPDPQPGAPMTDNPGPQQGRP GEEYGREDDRYGRPDQDPRGQQPQGGQGYPPRQGGYEGGGYGQGQPYGQDYGRPPAGYDQGGYQQRPPQQGGYDQGGYGA PPQAPQGGGDYGRPPAPPQQGGGYGAPPQQGGYGEPPRPNYGEYEQGGGYGGGQYGGQQGPPPGQDYGRPPAYPQQGGYG APPQQGGYGSPEYGDYEQGGYQSSPDYGAPAGGPGGGRTTVTLQLDDGSGRTYQLREGTNVIGRGQDAQFRLPDTGVSRR HLEVRFDGHAALLSDLNSTNGTTVNNAPVTEWQLADGDIIRLGHSEIIVRVQ
Sequences:
>Translated_452_residues MGIVQRFERKLEDVVGDAFARVFGGSIVPQEVQASLRREAADGVRSAGQGRLLAPNEFFVLLSTADHEKAADDRDLNPDT FAELLREYIRDQGWQTYGEVVVRFEQSPNLHTGQFRTRGVVNPDSKRDRPHGAVTTAPPTPDPQPGAPMTDNPGPQQGRP GEEYGREDDRYGRPDQDPRGQQPQGGQGYPPRQGGYEGGGYGQGQPYGQDYGRPPAGYDQGGYQQRPPQQGGYDQGGYGA PPQAPQGGGDYGRPPAPPQQGGGYGAPPQQGGYGEPPRPNYGEYEQGGGYGGGQYGGQQGPPPGQDYGRPPAYPQQGGYG APPQQGGYGSPEYGDYEQGGYQSSPDYGAPAGGPGGGRTTVTLQLDDGSGRTYQLREGTNVIGRGQDAQFRLPDTGVSRR HLEVRFDGHAALLSDLNSTNGTTVNNAPVTEWQLADGDIIRLGHSEIIVRVQ >Mature_451_residues GIVQRFERKLEDVVGDAFARVFGGSIVPQEVQASLRREAADGVRSAGQGRLLAPNEFFVLLSTADHEKAADDRDLNPDTF AELLREYIRDQGWQTYGEVVVRFEQSPNLHTGQFRTRGVVNPDSKRDRPHGAVTTAPPTPDPQPGAPMTDNPGPQQGRPG EEYGREDDRYGRPDQDPRGQQPQGGQGYPPRQGGYEGGGYGQGQPYGQDYGRPPAGYDQGGYQQRPPQQGGYDQGGYGAP PQAPQGGGDYGRPPAPPQQGGGYGAPPQQGGYGEPPRPNYGEYEQGGGYGGGQYGGQQGPPPGQDYGRPPAYPQQGGYGA PPQQGGYGSPEYGDYEQGGYQSSPDYGAPAGGPGGGRTTVTLQLDDGSGRTYQLREGTNVIGRGQDAQFRLPDTGVSRRH LEVRFDGHAALLSDLNSTNGTTVNNAPVTEWQLADGDIIRLGHSEIIVRVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48270; Mature: 48138
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIVQRFERKLEDVVGDAFARVFGGSIVPQEVQASLRREAADGVRSAGQGRLLAPNEFFV CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEE LLSTADHEKAADDRDLNPDTFAELLREYIRDQGWQTYGEVVVRFEQSPNLHTGQFRTRGV EEECCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEECCC VNPDSKRDRPHGAVTTAPPTPDPQPGAPMTDNPGPQQGRPGEEYGREDDRYGRPDQDPRG CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC QQPQGGQGYPPRQGGYEGGGYGQGQPYGQDYGRPPAGYDQGGYQQRPPQQGGYDQGGYGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPQAPQGGGDYGRPPAPPQQGGGYGAPPQQGGYGEPPRPNYGEYEQGGGYGGGQYGGQQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPGQDYGRPPAYPQQGGYGAPPQQGGYGSPEYGDYEQGGYQSSPDYGAPAGGPGGGRTT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VTLQLDDGSGRTYQLREGTNVIGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSDLNSTN EEEEEECCCCCEEEECCCCCEEECCCCCEEECCCCCCCCEEEEEEECCHHHHHHHCCCCC GTTVNNAPVTEWQLADGDIIRLGHSEIIVRVQ CCCCCCCCCCEEEECCCCEEEECCCEEEEEEC >Mature Secondary Structure GIVQRFERKLEDVVGDAFARVFGGSIVPQEVQASLRREAADGVRSAGQGRLLAPNEFFV CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEE LLSTADHEKAADDRDLNPDTFAELLREYIRDQGWQTYGEVVVRFEQSPNLHTGQFRTRGV EEECCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEECCC VNPDSKRDRPHGAVTTAPPTPDPQPGAPMTDNPGPQQGRPGEEYGREDDRYGRPDQDPRG CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC QQPQGGQGYPPRQGGYEGGGYGQGQPYGQDYGRPPAGYDQGGYQQRPPQQGGYDQGGYGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPQAPQGGGDYGRPPAPPQQGGGYGAPPQQGGYGEPPRPNYGEYEQGGGYGGGQYGGQQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPGQDYGRPPAYPQQGGYGAPPQQGGYGSPEYGDYEQGGYQSSPDYGAPAGGPGGGRTT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VTLQLDDGSGRTYQLREGTNVIGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSDLNSTN EEEEEECCCCCEEEECCCCCEEECCCCCEEECCCCCCCCEEEEEEECCHHHHHHHCCCCC GTTVNNAPVTEWQLADGDIIRLGHSEIIVRVQ CCCCCCCCCCEEEECCCCEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA