Click here to switch to the map view.

The map label for this gene is yjjK [H]

Identifier: 16767822

GI number: 16767822

Start: 4837159

End: 4838826

Strand: Reverse

Name: yjjK [H]

Synonym: STM4581

Alternate gene names: 16767822

Gene position: 4838826-4837159 (Counterclockwise)

Preceding gene: 16767825

Following gene: 16767818

Centisome position: 99.62

GC content: 57.79

Gene sequence:

>1668_bases
GTGGCTCAATTCGTTTATACCATGCATCGTGTCGGCAAAGTGGTTCCGCCGAAACGTCATATTCTGAAAAACATCTCGCT
GAGCTTCTTCCCTGGCGCCAAAATCGGCGTGCTGGGCCTTAACGGCGCCGGTAAGTCTACCCTGCTGCGCATCATGGCGG
GGCTCGATAAAGATATCGAGGGCGAAGCGCGCCCGCAGCCCGGCATTAAGATTGGCTACCTGCCGCAGGAACCTCAGCTA
AACCCGGAACACACGGTACGCGAGTCGATTGAAGAGGCCGTTTCGGAAGTGGTTAACGCCCTCAAACGTCTGGATGAAGT
GTACGCGCTGTATGCCGATCCGGATGCCGACTTCGACAAGCTGGCCGCAGAGCAGGGCCGACTTGAAGAGATTATCCAGG
CGCACGACGGTCATAATCTGAACGTGCAGCTTGAGCGCGCTGCTGACGCTCTGCGTCTGCCGGACTGGGATGCCAAAGTC
GAAAAACTGTCCGGCGGCGAGCGCCGTCGCGTGGCGCTGTGCCGTCTGTTGCTGGAAAAGCCGGACATGCTGCTGCTCGA
CGAACCCACCAACCACCTGGATGCCGAATCTGTTGCGTGGCTGGAACGTTTCCTGCACGACTTCGAAGGTACCGTCGTGG
CGATTACCCACGACCGTTACTTCCTCGATAACGTCGCCGGCTGGATTCTGGAACTTGACCGCGGCGAAGGTATTCCGTGG
GAAGGCAACTACTCCTCCTGGCTGGAGCAGAAAGATCAGCGTCTGGCGCAGGAAGCGTCTGCCGAAGCGGCGCGCCGTAA
ATCCATTGAGAAAGAGCTGGAGTGGGTGCGTCAGGGCGCGAAAGGCCGTCAGTCGAAAGGTAAGGCGCGTCTGGCTCGCT
TTGAAGAACTGAACAGCGTTGAGTATCAGAAACGTAACGAAACCAACGAACTGTTTATTCCACCAGGACCGCGTCTGGGC
GACAAAGTCATTGAAGTCAGCAACCTGCGTAAATCCTACGGCGACCGCGTACTGATCGACGACCTGAGCTTCTCGGTGCC
GAAAGGCGCTATCGTCGGGATCATCGGGCCAAACGGCGCGGGTAAATCGACCCTGTTCCGCATGATGTCCGGTCAGGAGC
AGCCCGATAGCGGCACCATTACGCTGGGTGAAACCGTCAAGCTGGCCTCGGTCGATCAGTTCCGCGACGCGATGGACAAC
AGCAAAACCGTCTGGGAAGAAGTGTCCGGCGGGCTGGATATCATGAAGATCGGCAACACTGAAATGCCAAGCCGCGCCTA
TGTAGGCCGCTTCAACTTCAAAGGCGTCGATCAGGGCAAACGCGTTGGCGAACTGTCCGGCGGTGAGCGCGGTCGTTTGC
ATCTGGCGAAGCTGCTGCAGGTGGGCGGCAACGTCCTGCTGCTCGACGAACCGACGAACGACCTGGATATCGAAACCCTG
CGCGCGCTGGAAAACGCCCTGCTGGAGTTCCCTGGCTGCGCGATGGTTATCTCGCACGACCGTTGGTTCCTTGACCGTAT
CGCCACCCACATTCTGGATTATCAGGATGAAGGTAAGGTGGAATTCTTCGAAGGCAACTTTACCGAATACGAAGAGTACA
AGAAACGCACGCTGGGCGCCGAGGCGCTGGAGCCGAAGCGTATCAAGTACAAGCGTATTGCCAAATAA

Upstream 100 bases:

>100_bases
GCGAGTGCGATCTGCTGGCTGGGCTTAGGCAGGGAAAAAGGCTACACTTCGCCTTTGACATCTATTCACCATCACGATAA
ACATAGAGGCGAAGTCCAAC

Downstream 100 bases:

>100_bases
ATGTCTGAATGCCGGGTGGCGCTTGCGCTTACCCGGCCTACAAACCCAGCGATTCCAGTACGTTGTGAAACTGTAGGCCT
GATAAGACGCGGTAAGCGTC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGLDKDIEGEARPQPGIKIGYLPQEPQL
NPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKV
EKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW
EGNYSSWLEQKDQRLAQEASAEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNSVEYQKRNETNELFIPPGPRLG
DKVIEVSNLRKSYGDRVLIDDLSFSVPKGAIVGIIGPNGAGKSTLFRMMSGQEQPDSGTITLGETVKLASVDQFRDAMDN
SKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETL
RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGAEALEPKRIKYKRIAK

Sequences:

>Translated_555_residues
MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGLDKDIEGEARPQPGIKIGYLPQEPQL
NPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKV
EKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW
EGNYSSWLEQKDQRLAQEASAEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNSVEYQKRNETNELFIPPGPRLG
DKVIEVSNLRKSYGDRVLIDDLSFSVPKGAIVGIIGPNGAGKSTLFRMMSGQEQPDSGTITLGETVKLASVDQFRDAMDN
SKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETL
RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGAEALEPKRIKYKRIAK
>Mature_554_residues
AQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGLDKDIEGEARPQPGIKIGYLPQEPQLN
PEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKVE
KLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWE
GNYSSWLEQKDQRLAQEASAEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNSVEYQKRNETNELFIPPGPRLGD
KVIEVSNLRKSYGDRVLIDDLSFSVPKGAIVGIIGPNGAGKSTLFRMMSGQEQPDSGTITLGETVKLASVDQFRDAMDNS
KTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETLR
ALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGAEALEPKRIKYKRIAK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI27881506, Length=545, Percent_Identity=30.8256880733945, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI10947137, Length=545, Percent_Identity=30.8256880733945, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI148612853, Length=524, Percent_Identity=27.8625954198473, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=28.8073394495413, Blast_Score=158, Evalue=2e-38,
Organism=Homo sapiens, GI10947135, Length=545, Percent_Identity=28.8073394495413, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI31657092, Length=186, Percent_Identity=29.5698924731183, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI9955968, Length=237, Percent_Identity=26.5822784810127, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI9955966, Length=237, Percent_Identity=26.5822784810127, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI45243524, Length=237, Percent_Identity=26.5822784810127, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=97.2972972972973, Blast_Score=1109, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=35.077519379845, Blast_Score=271, Evalue=9e-74,
Organism=Escherichia coli, GI1787041, Length=518, Percent_Identity=31.2741312741313, Blast_Score=231, Evalue=9e-62,
Organism=Escherichia coli, GI1789751, Length=530, Percent_Identity=31.3207547169811, Blast_Score=231, Evalue=1e-61,
Organism=Escherichia coli, GI87081782, Length=555, Percent_Identity=25.9459459459459, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=29.5336787564767, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI48994943, Length=493, Percent_Identity=24.7464503042596, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI87081791, Length=198, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1788761, Length=197, Percent_Identity=29.9492385786802, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1790739, Length=173, Percent_Identity=36.9942196531792, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788506, Length=555, Percent_Identity=24.5045045045045, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788225, Length=221, Percent_Identity=28.9592760180996, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1786975, Length=483, Percent_Identity=24.8447204968944, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789891, Length=265, Percent_Identity=25.6603773584906, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI87081834, Length=214, Percent_Identity=29.4392523364486, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786345, Length=239, Percent_Identity=30.9623430962343, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1788644, Length=233, Percent_Identity=28.3261802575107, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787370, Length=193, Percent_Identity=25.9067357512953, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788897, Length=228, Percent_Identity=27.1929824561404, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786698, Length=163, Percent_Identity=29.4478527607362, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786398, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787164, Length=205, Percent_Identity=28.2926829268293, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1788472, Length=209, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1789873, Length=230, Percent_Identity=26.9565217391304, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1790525, Length=209, Percent_Identity=25.8373205741627, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787712, Length=167, Percent_Identity=28.7425149700599, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=558, Percent_Identity=28.673835125448, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=26.6666666666667, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17553372, Length=540, Percent_Identity=28.5185185185185, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI71988343, Length=259, Percent_Identity=27.027027027027, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=183, Percent_Identity=32.2404371584699, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=165, Percent_Identity=32.1212121212121, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=543, Percent_Identity=27.4401473296501, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6320874, Length=525, Percent_Identity=28.7619047619048, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6323278, Length=395, Percent_Identity=27.3417721518987, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6324314, Length=380, Percent_Identity=26.3157894736842, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=26.7352185089974, Blast_Score=103, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6320266, Length=505, Percent_Identity=22.1782178217822, Blast_Score=75, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323959, Length=164, Percent_Identity=31.0975609756098, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666836, Length=529, Percent_Identity=29.6786389413989, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24642252, Length=535, Percent_Identity=28.785046728972, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI18859989, Length=535, Percent_Identity=28.785046728972, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24641342, Length=541, Percent_Identity=28.6506469500924, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI21357907, Length=183, Percent_Identity=29.5081967213115, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574259, Length=195, Percent_Identity=27.6923076923077, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62311; Mature: 62179

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGLDKDIE
CCHHHHHHHHHCCCCCCHHHHHHHCCEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCC
GEARPQPGIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDK
CCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHH
LAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKVEKLSGGERRRVALCRLLLEK
HHHHCCHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEEECCCCCCC
EGNYSSWLEQKDQRLAQEASAEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNSV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCH
EYQKRNETNELFIPPGPRLGDKVIEVSNLRKSYGDRVLIDDLSFSVPKGAIVGIIGPNGA
HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCCC
GKSTLFRMMSGQEQPDSGTITLGETVKLASVDQFRDAMDNSKTVWEEVSGGLDIMKIGNT
CHHHHHHHHCCCCCCCCCCEEECCEEEEHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCC
EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETL
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHH
RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCC
EALEPKRIKYKRIAK
CCCCCCHHHHHHCCC
>Mature Secondary Structure 
AQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGLDKDIE
CHHHHHHHHHCCCCCCHHHHHHHCCEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCC
GEARPQPGIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDK
CCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHH
LAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKVEKLSGGERRRVALCRLLLEK
HHHHCCHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEEECCCCCCC
EGNYSSWLEQKDQRLAQEASAEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNSV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCH
EYQKRNETNELFIPPGPRLGDKVIEVSNLRKSYGDRVLIDDLSFSVPKGAIVGIIGPNGA
HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCCC
GKSTLFRMMSGQEQPDSGTITLGETVKLASVDQFRDAMDNSKTVWEEVSGGLDIMKIGNT
CHHHHHHHHCCCCCCCCCCEEECCEEEEHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCC
EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETL
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHH
RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCC
EALEPKRIKYKRIAK
CCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]