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The map label for this gene is yjiN [H]

Identifier: 16767760

GI number: 16767760

Start: 4770684

End: 4771955

Strand: Reverse

Name: yjiN [H]

Synonym: STM4516

Alternate gene names: 16767760

Gene position: 4771955-4770684 (Counterclockwise)

Preceding gene: 16767761

Following gene: 16767759

Centisome position: 98.24

GC content: 54.4

Gene sequence:

>1272_bases
ATGAATAAAATCGCCGAACTCAAACGCGCCAAACGCCTGGCGCTCTCACTGTTGCTGATAGCCGCCGCGACGTTTGTGAC
CACGCTTTTCCTGCCGCCCAGTTTTTGGGTGCTGGGCGCAAAAGCTATTGCCGAAGCGGCGATGGTTGGCGCGCTGGCGG
ACTGGTTTGCCGTGGTGGCGCTGTTTCGCCGCATTCCCATTCCGTTTATTTCACGACATACGGCGATTATTCCCCGTAAT
AAAGACCGAATCGGCGAAAATCTTGGGCAATTTGTGCAGGAGAAGTTCCTTGATACGCAGTCGCTGATCGCGCTAATCCG
CCGCCATGAACCCGCGCTGCTTATCGGAAACTGGTTCAGCCAGCCGGACAACGCCAGCCGGGTCGGGCAGCATCTGCTGC
AAATTATGAGCGGCTTTCTGGAACTAACCGATGACGCCCGTATTCAGCGGCTGCTCAAGCGAGCGGTACATAAGGCGATT
GATAAAGTGGATCTTTCCGGCACCAGCGCCCTGATGCTGGAAAGCATGACCAAAAACGATCGTCACCAGGTGTTACTCGA
TACGCTGATCGCCCAGCTTATCGCCCTGTTACAGCGTGACAGCTCCCGAACATTTATCGCCAGACAGATCATACGCTGGC
TGGAGACCGAACATCCGTTAAAAGCGAAGATTCTGCCGACCGAATGGCTGGGAGAACACAGCGCTGAACTGGTCTCCGAC
GCGGTGAATTCTCTGCTGGATGATATCAGTCACGACCGCGCGCATCAGATTCGTCATGCCTTCGATCGCGCGACGTATAA
GCTGATCGATAAACTTAAACATGATCCGGAAATGGCTGCCCGGGCAGAAAACATTAAAAGTTACCTGAAGGAAGATGAGG
CGTTTAACCGTTATCTCGGCGAAATCTGGGCGGATCTACGCCAGTGGTTAAAAACAGATATCAACGCCGAAGACTCAAAG
GTGAAGCAGCGCATCGCTCATGCCGGACAATGGTTTGGCGAGACGCTGATCGCCGACGACGCATTACGCGCTTCGCTTAA
CGGTCATCTGGAACAGGCCGCGCACCGCGTCGCGCCGGAATTCGCCGCCTTCCTGACGCGCCACATCAGCGATACCGTAA
AAGGCTGGGATGCGCGCGATATGTCGCAGCAGATTGAGCTTAATATCGGTAAAGATTTGCAGTTTATCCGCGTGAACGGC
ACGCTGGTCGGCGGCGCTATCGGTCTGGTGTTATATTTACTGTCGCAAATACCGGCACTGCTCAGTATCTAA

Upstream 100 bases:

>100_bases
CCGCTGAGAAGTAAACACTCTGCCGGATAGAGGCTTATCCGGCACAGGATAATCTGATGTTTTTTGCACGTTCCTGCCGT
CTGGCTCTATCCTTAACCCT

Downstream 100 bases:

>100_bases
GAAGGGGAAGGCGCAATTCTCGTTCAGATTAACTGCCAAACCCCGCACGTGGGAGGCATTAATTTAATGCCATTTCCCAC
CGATGCCCCTCTTCTCAATC

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MNKIAELKRAKRLALSLLLIAAATFVTTLFLPPSFWVLGAKAIAEAAMVGALADWFAVVALFRRIPIPFISRHTAIIPRN
KDRIGENLGQFVQEKFLDTQSLIALIRRHEPALLIGNWFSQPDNASRVGQHLLQIMSGFLELTDDARIQRLLKRAVHKAI
DKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDSSRTFIARQIIRWLETEHPLKAKILPTEWLGEHSAELVSD
AVNSLLDDISHDRAHQIRHAFDRATYKLIDKLKHDPEMAARAENIKSYLKEDEAFNRYLGEIWADLRQWLKTDINAEDSK
VKQRIAHAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFAAFLTRHISDTVKGWDARDMSQQIELNIGKDLQFIRVNG
TLVGGAIGLVLYLLSQIPALLSI

Sequences:

>Translated_423_residues
MNKIAELKRAKRLALSLLLIAAATFVTTLFLPPSFWVLGAKAIAEAAMVGALADWFAVVALFRRIPIPFISRHTAIIPRN
KDRIGENLGQFVQEKFLDTQSLIALIRRHEPALLIGNWFSQPDNASRVGQHLLQIMSGFLELTDDARIQRLLKRAVHKAI
DKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDSSRTFIARQIIRWLETEHPLKAKILPTEWLGEHSAELVSD
AVNSLLDDISHDRAHQIRHAFDRATYKLIDKLKHDPEMAARAENIKSYLKEDEAFNRYLGEIWADLRQWLKTDINAEDSK
VKQRIAHAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFAAFLTRHISDTVKGWDARDMSQQIELNIGKDLQFIRVNG
TLVGGAIGLVLYLLSQIPALLSI
>Mature_423_residues
MNKIAELKRAKRLALSLLLIAAATFVTTLFLPPSFWVLGAKAIAEAAMVGALADWFAVVALFRRIPIPFISRHTAIIPRN
KDRIGENLGQFVQEKFLDTQSLIALIRRHEPALLIGNWFSQPDNASRVGQHLLQIMSGFLELTDDARIQRLLKRAVHKAI
DKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDSSRTFIARQIIRWLETEHPLKAKILPTEWLGEHSAELVSD
AVNSLLDDISHDRAHQIRHAFDRATYKLIDKLKHDPEMAARAENIKSYLKEDEAFNRYLGEIWADLRQWLKTDINAEDSK
VKQRIAHAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFAAFLTRHISDTVKGWDARDMSQQIELNIGKDLQFIRVNG
TLVGGAIGLVLYLLSQIPALLSI

Specific function: Unknown

COG id: COG2733

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790793, Length=423, Percent_Identity=89.8345153664303, Blast_Score=760, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007383 [H]

Pfam domain/function: PF04286 DUF445 [H]

EC number: NA

Molecular weight: Translated: 47671; Mature: 47671

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIAELKRAKRLALSLLLIAAATFVTTLFLPPSFWVLGAKAIAEAAMVGALADWFAVVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFRRIPIPFISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLIALIRRHEPALLIGNWFS
HHHHCCCCHHCCCCEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCC
QPDNASRVGQHLLQIMSGFLELTDDARIQRLLKRAVHKAIDKVDLSGTSALMLESMTKND
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
RHQVLLDTLIAQLIALLQRDSSRTFIARQIIRWLETEHPLKAKILPTEWLGEHSAELVSD
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHH
AVNSLLDDISHDRAHQIRHAFDRATYKLIDKLKHDPEMAARAENIKSYLKEDEAFNRYLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EIWADLRQWLKTDINAEDSKVKQRIAHAGQWFGETLIADDALRASLNGHLEQAAHRVAPE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAAFLTRHISDTVKGWDARDMSQQIELNIGKDLQFIRVNGTLVGGAIGLVLYLLSQIPAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
LSI
HCC
>Mature Secondary Structure
MNKIAELKRAKRLALSLLLIAAATFVTTLFLPPSFWVLGAKAIAEAAMVGALADWFAVVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFRRIPIPFISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLIALIRRHEPALLIGNWFS
HHHHCCCCHHCCCCEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCC
QPDNASRVGQHLLQIMSGFLELTDDARIQRLLKRAVHKAIDKVDLSGTSALMLESMTKND
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
RHQVLLDTLIAQLIALLQRDSSRTFIARQIIRWLETEHPLKAKILPTEWLGEHSAELVSD
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHH
AVNSLLDDISHDRAHQIRHAFDRATYKLIDKLKHDPEMAARAENIKSYLKEDEAFNRYLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EIWADLRQWLKTDINAEDSKVKQRIAHAGQWFGETLIADDALRASLNGHLEQAAHRVAPE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAAFLTRHISDTVKGWDARDMSQQIELNIGKDLQFIRVNGTLVGGAIGLVLYLLSQIPAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
LSI
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]