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The map label for this gene is yfcJ [C]

Identifier: 16767674

GI number: 16767674

Start: 4671190

End: 4672356

Strand: Reverse

Name: yfcJ [C]

Synonym: STM4428

Alternate gene names: 16767674

Gene position: 4672356-4671190 (Counterclockwise)

Preceding gene: 16767683

Following gene: 16767667

Centisome position: 96.19

GC content: 60.58

Gene sequence:

>1167_bases
ATGCCAGCTCTCACACAACATTCCACATCGATCACGCTGTTTCGCATCAGCGCCGCGATGTTTCTCAACTATCTGACTAT
TGGCATCCCGTTAGTCATGCTGCCGCTGTACGTTCAGCAGCAGTTGCATCTGAGCGATCTGTTGATCGGTATCGCGGTAG
GCAGCCAGTTTATCGCCACCTTGCTTACCCGGGGCGCCGCGGGTCGAAAAGCCGACACGTCAGGCGGACGTCGGACGGTT
ATCACCGGTCAGTTCTACTGCGCCGCATCAGGTCTGCTGATGCTGGTCAGTCTAATCGCTCACCCGGTTCCGCTGCTCGC
ATGGGCCATACTGATTGTTGGTCGTGTGCTGCTGGGCATCGGTGAAAGTTTCATTTTGACCGGTAATTTAACCTGGGGGA
TGTGGCTGGCGGGCTCGACCCACGCGGGTCAGGTTATTTCCTGGAACGGCATGGCGACCTACGGTGCGCTGGCTATCGGC
GCGCCGCTGGGGCTGTCGCTTTACGCCAGGGCCGGCCTGGCGCTTCCGGCGCTCCTCGTCGTGCTGTTGCCGATCATCGC
CAGCGGAGTCATCTATGGCATTCCGGGGAATATCCCAACAGCCCGTCCCCGCGTGCCAGTGCTACGGGTAGTCGGCCTGG
TGTGGCGGCCCGGAACAGGGCTTGTGCTCCAGGGCATTGGTTTTGCCACCCTAAGCGCGTTTACCGCCCTCTGGTTCAAC
GAGCGTCACTGGGATAACACCGGTTTTGCGATGACGCTGTTTGGCATTGCGTTTATCGCTGTCCGCTTTTTCTGCGCCAA
ATTTCCCGACCGTTACGGCGGCGCCACGGTCGCAACCTTTTCACTACTGGTAGAGGGGACCGGACTGGCGGTAATGTGGG
CCGCTCCGTCAGCAGGCGCTGCGCTGATTGGCGCGGCGATTACCGGCTGCGGCTGTTCGCTGATGTTCCCATCGCTGGGC
GTAGAGGTTGTGCGCAGAGTGCCACCGGAGATTCGTGGTACGGCCCTCGGCGTCTGGTCAGCGTTTCAGGATCTGGCCTA
CGGATTTACCGGACCAATAGCGGGCCTGCTGACGCCGTTTATCGGCTATCAGCAGGTCTTTCTTCTGGCCGCGGCCTGCG
CGCTGCTGGGCGCGGCGGTTGTCCATCTCTTGCTGCGGCAACATTAA

Upstream 100 bases:

>100_bases
GCTTATCGACTACTGGCGCGAATACCGCCCGGCACGTTAATGCCTGCCTCATCACGCCCCGTGTCTGCATCGGACAAGGG
GCGTGTTCAAGGACGATTCC

Downstream 100 bases:

>100_bases
GCTGTTAAGAAGGGGCGAGTCTTTTCCGCCCCTATCGCAAAGACTTCGCTGGCCGCCATCTGCCAGTAGCCAGGGTTAAA
CAGTTCCAGCGAACAGATCC

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPALTQHSTSITLFRISAAMFLNYLTIGIPLVMLPLYVQQQLHLSDLLIGIAVGSQFIATLLTRGAAGRKADTSGGRRTV
ITGQFYCAASGLLMLVSLIAHPVPLLAWAILIVGRVLLGIGESFILTGNLTWGMWLAGSTHAGQVISWNGMATYGALAIG
APLGLSLYARAGLALPALLVVLLPIIASGVIYGIPGNIPTARPRVPVLRVVGLVWRPGTGLVLQGIGFATLSAFTALWFN
ERHWDNTGFAMTLFGIAFIAVRFFCAKFPDRYGGATVATFSLLVEGTGLAVMWAAPSAGAALIGAAITGCGCSLMFPSLG
VEVVRRVPPEIRGTALGVWSAFQDLAYGFTGPIAGLLTPFIGYQQVFLLAAACALLGAAVVHLLLRQH

Sequences:

>Translated_388_residues
MPALTQHSTSITLFRISAAMFLNYLTIGIPLVMLPLYVQQQLHLSDLLIGIAVGSQFIATLLTRGAAGRKADTSGGRRTV
ITGQFYCAASGLLMLVSLIAHPVPLLAWAILIVGRVLLGIGESFILTGNLTWGMWLAGSTHAGQVISWNGMATYGALAIG
APLGLSLYARAGLALPALLVVLLPIIASGVIYGIPGNIPTARPRVPVLRVVGLVWRPGTGLVLQGIGFATLSAFTALWFN
ERHWDNTGFAMTLFGIAFIAVRFFCAKFPDRYGGATVATFSLLVEGTGLAVMWAAPSAGAALIGAAITGCGCSLMFPSLG
VEVVRRVPPEIRGTALGVWSAFQDLAYGFTGPIAGLLTPFIGYQQVFLLAAACALLGAAVVHLLLRQH
>Mature_387_residues
PALTQHSTSITLFRISAAMFLNYLTIGIPLVMLPLYVQQQLHLSDLLIGIAVGSQFIATLLTRGAAGRKADTSGGRRTVI
TGQFYCAASGLLMLVSLIAHPVPLLAWAILIVGRVLLGIGESFILTGNLTWGMWLAGSTHAGQVISWNGMATYGALAIGA
PLGLSLYARAGLALPALLVVLLPIIASGVIYGIPGNIPTARPRVPVLRVVGLVWRPGTGLVLQGIGFATLSAFTALWFNE
RHWDNTGFAMTLFGIAFIAVRFFCAKFPDRYGGATVATFSLLVEGTGLAVMWAAPSAGAALIGAAITGCGCSLMFPSLGV
EVVRRVPPEIRGTALGVWSAFQDLAYGFTGPIAGLLTPFIGYQQVFLLAAACALLGAAVVHLLLRQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family

Homologues:

Organism=Escherichia coli, GI1788662, Length=386, Percent_Identity=48.4455958549223, Blast_Score=323, Evalue=1e-89,
Organism=Escherichia coli, GI87082270, Length=374, Percent_Identity=39.0374331550802, Blast_Score=231, Evalue=4e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4428_SALTY (Q8ZK55)

Other databases:

- EMBL:   AE006468
- RefSeq:   NP_463289.1
- ProteinModelPortal:   Q8ZK55
- GeneID:   1255954
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM4428
- NMPDR:   fig|99287.1.peg.4261
- HOGENOM:   HBG299639
- OMA:   WSSIAST
- ProtClustDB:   PRK05122
- BioCyc:   STYP99287:STM4428-MONOMER
- HAMAP:   MF_01118
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 40696; Mature: 40565

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x421d5628)-; HASH(0x1493e32c)-; HASH(0x1445ea84)-; HASH(0x12d4ae48)-; HASH(0x146665c0)-; HASH(0x13636060)-; HASH(0x1378e624)-; HASH(0x13a0c4ac)-; HASH(0x4217b8e0)-; HASH(0x1386d8e8)-; HASH(0x133abeac)-; HASH(0x421a3e28)-;

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALTQHSTSITLFRISAAMFLNYLTIGIPLVMLPLYVQQQLHLSDLLIGIAVGSQFIAT
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTRGAAGRKADTSGGRRTVITGQFYCAASGLLMLVSLIAHPVPLLAWAILIVGRVLLGI
HHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
GESFILTGNLTWGMWLAGSTHAGQVISWNGMATYGALAIGAPLGLSLYARAGLALPALLV
CCCEEEECCCEEEEEECCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VLLPIIASGVIYGIPGNIPTARPRVPVLRVVGLVWRPGTGLVLQGIGFATLSAFTALWFN
HHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHC
ERHWDNTGFAMTLFGIAFIAVRFFCAKFPDRYGGATVATFSLLVEGTGLAVMWAAPSAGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCEEEEEECCCCCH
ALIGAAITGCGCSLMFPSLGVEVVRRVPPEIRGTALGVWSAFQDLAYGFTGPIAGLLTPF
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
IGYQQVFLLAAACALLGAAVVHLLLRQH
HHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
PALTQHSTSITLFRISAAMFLNYLTIGIPLVMLPLYVQQQLHLSDLLIGIAVGSQFIAT
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTRGAAGRKADTSGGRRTVITGQFYCAASGLLMLVSLIAHPVPLLAWAILIVGRVLLGI
HHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
GESFILTGNLTWGMWLAGSTHAGQVISWNGMATYGALAIGAPLGLSLYARAGLALPALLV
CCCEEEECCCEEEEEECCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VLLPIIASGVIYGIPGNIPTARPRVPVLRVVGLVWRPGTGLVLQGIGFATLSAFTALWFN
HHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHC
ERHWDNTGFAMTLFGIAFIAVRFFCAKFPDRYGGATVATFSLLVEGTGLAVMWAAPSAGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCEEEEEECCCCCH
ALIGAAITGCGCSLMFPSLGVEVVRRVPPEIRGTALGVWSAFQDLAYGFTGPIAGLLTPF
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
IGYQQVFLLAAACALLGAAVVHLLLRQH
HHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609